Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq2 134 3e-26
seq15 129 1e-24
seq17 116 9e-21
>seq2
Length=821690
Score = 134 bits (148), Expect = 3e-26
Identities = 146/194 (75%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
||||||||||| |||||||| ||||| || || | | || || |||||||||| ||
Sbjct 193841 TGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGT 193782
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || ||||| | | |||||||||||| |||| ||||| ||||| ||||| ||
Sbjct 193781 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTG 193722
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| ||||| ||||||||||| || ||| || || || ||||| ||||| || ||
Sbjct 193721 GCTTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGATAGTCTTACCAGTT 193662
Query 211092 AGAGTCTTTACAAA 211105
| || || |||||
Sbjct 193661 AAGGTTTTGACAAA 193648
>seq15
Length=1932387
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||| | ||| | ||||| |||||||| ||||||||||| || |||| | || || ||
Sbjct 1576862 TCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCC 1576803
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||||| ||| || || || ||||| | | ||||||||| || |||| || || ||
Sbjct 1576802 GTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCCTCTTT 1576743
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| || ||||| ||||| ||||| || ||| || || | ||||||
Sbjct 1576742 GTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCGACTTCCAAAGTGAT 1576683
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117
||||| || || | || || || || | ||||||||
Sbjct 1576682 GGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTTT 1576644
Score = 123 bits (136), Expect = 6e-23
Identities = 149/203 (73%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
||||| |||||||| ||||||||||| || |||| | || || || ||||||| |||
Sbjct 1577077 TGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGT 1577018
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || ||||| | | ||||||||| || |||| ||||| ||||| ||||||||
Sbjct 1577017 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTG 1576958
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
|| ||||| ||||| ||||| ||| || || || | |||||| || || || ||
Sbjct 1576957 GACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGATGGTTTTCCCAGTC 1576898
Query 211092 AGAGTCTTTACAAACACCTGCAT 211114
| || || || || | |||||
Sbjct 1576897 AATGTTTTAACGAAAATTTGCAT 1576875
>seq17
Length=834807
Score = 116 bits (128), Expect = 9e-21
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971
||||| ||||| |||||||| ||||| || || | | || || |||||||||| ||
Sbjct 25723 TGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGT 25664
Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031
|| || || ||||| | | |||||||||||| |||| ||||| ||||| ||||| ||
Sbjct 25663 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTG 25604
Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091
||| || || || || |||||||| |||||| || | || || || || || ||
Sbjct 25603 GCTTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTTTTACCTGTC 25544
Query 211092 AGAGTCTTTACAAACACCTGCATTTT 211117
| ||| || || || | ||||| ||
Sbjct 25543 AAAGTTTTAACGAAAATTTGCATCTT 25518
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159151747522205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |