Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2 134 3e-26 seq15 129 1e-24 seq17 116 9e-21 >seq2 Length=821690 Score = 134 bits (148), Expect = 3e-26 Identities = 146/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||||||||| |||||||| ||||| || || | | || || |||||||||| || Sbjct 193841 TGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGT 193782 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| | | |||||||||||| |||| ||||| ||||| ||||| || Sbjct 193781 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTG 193722 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| ||||| ||||||||||| || ||| || || || ||||| ||||| || || Sbjct 193721 GCTTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGATAGTCTTACCAGTT 193662 Query 211092 AGAGTCTTTACAAA 211105 | || || ||||| Sbjct 193661 AAGGTTTTGACAAA 193648 >seq15 Length=1932387 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||||| |||||||| ||||||||||| || |||| | || || || Sbjct 1576862 TCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCC 1576803 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||||| ||| || || || ||||| | | ||||||||| || |||| || || || Sbjct 1576802 GTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCCTCTTT 1576743 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| |||||||| || ||||| ||||| ||||| || ||| || || | |||||| Sbjct 1576742 GTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCGACTTCCAAAGTGAT 1576683 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | || || || || | |||||||| Sbjct 1576682 GGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTTT 1576644 Score = 123 bits (136), Expect = 6e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| |||||||| ||||||||||| || |||| | || || || ||||||| ||| Sbjct 1577077 TGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTGT 1577018 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| | | ||||||||| || |||| ||||| ||||| |||||||| Sbjct 1577017 TTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTG 1576958 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 || ||||| ||||| ||||| ||| || || || | |||||| || || || || Sbjct 1576957 GACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGATGGTTTTCCCAGTC 1576898 Query 211092 AGAGTCTTTACAAACACCTGCAT 211114 | || || || || | ||||| Sbjct 1576897 AATGTTTTAACGAAAATTTGCAT 1576875 >seq17 Length=834807 Score = 116 bits (128), Expect = 9e-21 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 210912 TGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGC 210971 ||||| ||||| |||||||| ||||| || || | | || || |||||||||| || Sbjct 25723 TGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCCAATTGT 25664 Query 210972 TTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTT 211031 || || || ||||| | | |||||||||||| |||| ||||| ||||| ||||| || Sbjct 25663 TTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGGATTTTG 25604 Query 211032 TGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTG 211091 ||| || || || || |||||||| |||||| || | || || || || || || Sbjct 25603 GCTTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTTTTACCTGTC 25544 Query 211092 AGAGTCTTTACAAACACCTGCATTTT 211117 | ||| || || || | ||||| || Sbjct 25543 AAAGTTTTAACGAAAATTTGCATCTT 25518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151747522205