Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq15 165 2e-35
seq17 158 3e-33
seq2 154 4e-32
seq16 95.1 3e-14
>seq15
Length=1932387
Score = 165 bits (182), Expect = 2e-35
Identities = 168/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| ||| | || || ||||| || ||||||| ||||| || | ||||||||| ||
Sbjct 1576862 TCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCC 1576803
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||| || ||||| ||||| | || ||||||||| || ||||| || || ||
Sbjct 1576802 GTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCCTCTTT 1576743
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| || ||||| |||||||| | ||| || || || |||||
Sbjct 1576742 GTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCGACTTCCAAAGTGAT 1576683
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || ||||| ||||| | ||| | |||||||||
Sbjct 1576682 GGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTTT 1576644
Score = 150 bits (166), Expect = 4e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | || || ||||| || ||||||| ||||| || | ||||||||| ||
Sbjct 1577090 TCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCC 1577031
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||| | ||| || ||||| ||||| | || ||||||||| || ||||| ||||| ||
Sbjct 1577030 GTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTT 1576971
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
|||||||||||| ||| || ||||| ||||| |||| || || || || |||||
Sbjct 1576970 GTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGAT 1576911
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|| || || ||||| ||||| | ||| | ||||||
Sbjct 1576910 GGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875
>seq17
Length=834807
Score = 158 bits (174), Expect = 3e-33
Identities = 168/220 (76%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | || || |||||||||||||| | ||||| || | ||||||||| ||
Sbjct 25736 TCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 25677
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| ||||| | || ||||||||| || ||||||||||| ||
Sbjct 25676 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 25617
Query 225618 GTCTTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676
||||||||| ||| |||| ||| || || ||||| || | ||| || || || || |
Sbjct 25616 GTCTTGGAT-TTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAA 25558
Query 225677 TCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
| || || || ||||||||||| | ||| | |||||| ||
Sbjct 25557 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 25518
>seq2
Length=821690
Score = 154 bits (170), Expect = 4e-32
Identities = 157/202 (78%), Gaps = 2/202 (1%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | || ||||||||||||||||| | ||||| || | ||||||||| ||
Sbjct 193854 TCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 193795
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| ||||| | || ||||||||| || ||||||||||| ||
Sbjct 193794 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 193735
Query 225618 GTCTTGGATCTTTTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676
||||||||| ||| |||| | | ||||||||||| || | ||| || |||| ||||
Sbjct 193734 GTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGA 193676
Query 225677 TCGTCTTGCCCGTCAAAGTTTT 225698
| ||||| || || || |||||
Sbjct 193675 TAGTCTTACCAGTTAAGGTTTT 193654
>seq16
Length=1651669
Score = 95.1 bits (104), Expect = 3e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||| ||||| || ||||||||||| || ||||||||||||||||||||
Sbjct 1338062 GAAAATTTGACCATCGGTAATGGAAATAACATTTGTTGGAATATAAGCAGAAACATCACC 1338003
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTA 4561
|||| ||||| | | ||||| || ||||
Sbjct 1338002 ACCTTGAGTTTCAATGATTGGTAAAGCGGTTA 1337971
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192530940251798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |