Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq15 165 2e-35 seq17 158 3e-33 seq2 154 4e-32 seq16 95.1 3e-14 >seq15 Length=1932387 Score = 165 bits (182), Expect = 2e-35 Identities = 168/219 (77%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| ||| | || || ||||| || ||||||| ||||| || | ||||||||| || Sbjct 1576862 TCTCAAGACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCC 1576803 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||| || ||||| ||||| | || ||||||||| || ||||| || || || Sbjct 1576802 GTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCCTCTTT 1576743 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| || ||||| |||||||| | ||| || || || ||||| Sbjct 1576742 GTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCTGAAGATTCGACTTCCAAAGTGAT 1576683 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || ||||| ||||| | ||| | ||||||||| Sbjct 1576682 GGTCTTCCCAGTCAATGTTTTAACGAAAATTTGCATTTT 1576644 Score = 150 bits (166), Expect = 4e-31 Identities = 163/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | || || ||||| || ||||||| ||||| || | ||||||||| || Sbjct 1577090 TCTCAAAACTAAATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCC 1577031 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||| | ||| || ||||| ||||| | || ||||||||| || ||||| ||||| || Sbjct 1577030 GTCTTCCAACTGTTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTT 1576971 Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677 |||||||||||| ||| || ||||| ||||| |||| || || || || ||||| Sbjct 1576970 GTCTTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGAT 1576911 Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || ||||| ||||| | ||| | |||||| Sbjct 1576910 GGTTTTCCCAGTCAATGTTTTAACGAAAATTTGCAT 1576875 >seq17 Length=834807 Score = 158 bits (174), Expect = 3e-33 Identities = 168/220 (76%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | || || |||||||||||||| | ||||| || | ||||||||| || Sbjct 25736 TCTCAAAACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 25677 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | || || ||||| ||||| | || ||||||||| || ||||||||||| || Sbjct 25676 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 25617 Query 225618 GTCTTGGATCTTTTGCTTC-ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676 ||||||||| ||| |||| ||| || || ||||| || | ||| || || || || | Sbjct 25616 GTCTTGGAT-TTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAA 25558 Query 225677 TCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 | || || || ||||||||||| | ||| | |||||| || Sbjct 25557 TGGTTTTACCTGTCAAAGTTTTAACGAAAATTTGCATCTT 25518 >seq2 Length=821690 Score = 154 bits (170), Expect = 4e-32 Identities = 157/202 (78%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | || ||||||||||||||||| | ||||| || | ||||||||| || Sbjct 193854 TCTCAAAACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 193795 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 |||||| | || || ||||| ||||| | || ||||||||| || ||||||||||| || Sbjct 193794 ATCTTCCAATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTT 193735 Query 225618 GTCTTGGATCTTTTGCTTCACAGCT-TCGATGGTGTCTGAGGTTTCCACGTCTAACGTGA 225676 ||||||||| ||| |||| | | ||||||||||| || | ||| || |||| |||| Sbjct 193734 GTCTTGGAT-TTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGA 193676 Query 225677 TCGTCTTGCCCGTCAAAGTTTT 225698 | ||||| || || || ||||| Sbjct 193675 TAGTCTTACCAGTTAAGGTTTT 193654 >seq16 Length=1651669 Score = 95.1 bits (104), Expect = 3e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529 ||| ||||||||||| ||||| || ||||||||||| || |||||||||||||||||||| Sbjct 1338062 GAAAATTTGACCATCGGTAATGGAAATAACATTTGTTGGAATATAAGCAGAAACATCACC 1338003 Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTA 4561 |||| ||||| | | ||||| || |||| Sbjct 1338002 ACCTTGAGTTTCAATGATTGGTAAAGCGGTTA 1337971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530940251798