Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq14 302 4e-77
>seq14
Length=1659880
Score = 302 bits (334), Expect = 4e-77
Identities = 615/898 (68%), Gaps = 19/898 (2%)
Strand=Plus/Plus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
||||| |||||| || || || |||| ||||| |||||||| ||||| ||| | ||
Sbjct 312441 ACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTTTCCTGCCAAA 312500
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTC---ACACTTT 4364
|| || ||||||||||||||||| || || | | ||||||| |||||| || | |
Sbjct 312501 GAGATGTTTTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTCGTTACCCAAT 312560
Query 4365 AGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTC-GCAGTT 4423
|| || | |||| ||||| |||||||| | ||| || |||| | | ||| ||
Sbjct 312561 ---GCAACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAAAGCAGCA-TT 312616
Query 4424 AATTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTT-CTATAGTTACGG 4482
||||| | || |||||||| || | | |||||| |||| || | |||| || |
Sbjct 312617 CATTCCTAACAAAGATACAGGTAGTGCATCT-TCAAAATATCTTTTTTCAATAGAAACTG 312675
Query 4483 CTTCTGTGATTATATCTTTTATTTTATCTTTAGAT--GGTTTATTTACTAAGTATCCAAA 4540
|||| || || || ||||| | || ||| ||| ||||| ||| | || | | ||
Sbjct 312676 CTTCAGTAATGAT-TCTTTCAGCA-ATTTTTGGATCAGGTTTGTTTTCCAAATGTTGGAA 312733
Query 4541 CAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAA 4600
|||| ||| |||||||| ||||| ||||| ||||| | ||||| ||| || |||||
Sbjct 312734 TAATAGACATGCAAAATCGGTATGCAGTCCTTCATCTCTACAAATCAATTCATTTGAAAA 312793
Query 4601 CGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGA 4660
||||| || ||||| || || | || || | |||||| || || ||||| || |||||
Sbjct 312794 AGTTAAACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGATTGCAGCAAAGGATCCAGA 312853
Query 4661 AAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATC-GGGACCCGAACGAGCTGGCTT 4719
|||||| | ||||| || || ||||| || || |||| | | || | || |||
Sbjct 312854 AAAGAAAACACCTTCCACAGCAGCAAATGCCACCAATCTTTCAGCAAAAAGTGC-ATCTT 312912
Query 4720 TGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATA 4779
||||| ||||||| | | ||||| | || |||| || | |||||||| | |
Sbjct 312913 CGTCTTGAATCCATCTAATAGCCCATTCTGCCTTTTCTTTGATTTGAGGAATTGTTTCAA 312972
Query 4780 TAGCGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGC 4839
| || || ||||| | |||| ||| |||| |||||||| || || | ||
Sbjct 312973 TGGCATTGAATAAAAAATCGCTTTCTTTTGGATCTTTGATATAAGTATCAATCAAAAGTG 313032
Query 4840 TATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTT 4899
||| ||||| || || ||||| || ||| |||||||||||||| ||| | ||||
Sbjct 313033 AATAAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATCCGTAAAAACATTTGGCTT 313092
Query 4900 CTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCAC 4959
| | | ||| ||||| || ||| |||| || || ||||| || || || || |||
Sbjct 313093 CAGGAATTTGCACTTCTGCACTAAAATTTTCAACCAAATTTTCATTAACAATTCCATCAG 313152
Query 4960 TGGCTGCAAAAAACGCCAAAACATGAGATAT-AAAGTACTGT--TCGTCAGGCTTAAGTT 5016
||||||||||| || ||||| | || ||| || | | ||| | | |
Sbjct 313153 AAGCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTTCATTTTCATTCATTCTGT 313212
Query 5017 TTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTT 5076
| ||||| | | |||||||||| | || ||||| |||||| |||||||||| || ||||
Sbjct 313213 TATTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTGCAGTCCAAAAAGAAGCTT 313272
Query 5077 CCGCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134
| || ||| || |||||| ||| |||| | || |||| | ||||||||
Sbjct 313273 CTGCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTGGAAACAAAACAAATCT 313330
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427049511520661
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |