Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq16 563 1e-155 seq14 352 4e-92 >seq16 Length=1651669 Score = 563 bits (624), Expect = 1e-155 Identities = 1485/2248 (66%), Gaps = 56/2248 (2%) Strand=Plus/Minus Query 76778 CAATG-TAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTT 76836 ||||| |||| || || | || ||| |||| || || | | ||||||||||| |||| Sbjct 931322 CAATGGTAAATTGGATGGCAGCAGAAGCGGCTTGGGTTCTCAAGTAGTACATACCTGTTT 931263 Query 76837 TTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGG 76896 | | ||| | ||| ||||| ||||||||| |||| ||| | || | Sbjct 931262 TCAAACCTTTAGACCACCCGTAAAAATGCATGGAGGTCAATTTACCCATGGTTGGGGCCA 931203 Query 76897 CTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTT 76956 || ||||| |||| || ||| |||||| || |||||| ||| || || ||||| | Sbjct 931202 TGATGTGAATGTTCAAAGAATGAGATTGATCAATAAAAGCTGATCTGTCTGCAGCCATGT 931143 Query 76957 TTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTG 77016 || ||||| ||||| | | |||||||| |||||| | | | ||| | || | | Sbjct 931142 CGATGATGGTTTTTTGCGACAATTCCCAAACGGTTTTGTACAAGTCTTTAAGTTCTTGAG 931083 Query 77017 GAAGGTTTGT---ATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTT-ATATCA 77072 ||| ||||| || |||||| || || | | ||||| || | ||| || || Sbjct 931082 GAATGTTTGGCAAATGTTGAATAGACCCGTTGTTAGCAATAAT-GTTTGATTTCATGGCA 931024 Query 77073 TCATTCCACAATTTCCTC-TCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAA 77131 || | ||| |||| || || ||| ||||||| | | || || || ||||| || Sbjct 931023 TCGTCCCA-AATTCCCAAATCAACCAAATCTCTAAGCAAGTATGGGTTCACAATTTGGAA 930965 Query 77132 TTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATT 77191 ||| |||||||| ||| | || ||| || || ||| ||||||| | | ||||||| Sbjct 930964 TTCCCCAGACAAAGTTCTTCTAGAGTACATGTTTGAAGTAAATGGTTCGAAACATTCATT 930905 Query 77192 GTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCT 77251 || ||||| ||||| | ||| ||||| ||||||||||| |||| | || ||||| Sbjct 930904 GTAACCCAAGATTTGCGAAGTTGAAGCCGTTGGCATAGGAGCCAATAGCAATGAGTTTCT 930845 Query 77252 GAGACCATGTGTTC-TGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTA 77310 | ||| ||| ||| ||||||| ||| | | | ||| ||| |||||||||||||| || Sbjct 930844 TAAACC-TGTTTTCATGATTTTTTCTCTCAAAGATTCCCATTCCCAAAGATCTGATGGAG 930786 Query 77311 CAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATATGATCCATTATATGTTT 77370 | | ||| | |||| |||| | || || | ||| ||||| | | | | || Sbjct 930785 CTCTGTTCCACATATCGAATTGCAAAACCCCTTGGGAAGCTGGAGATCCTTGAAACGATT 930726 Query 77371 CATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTG 77430 || || ||||| | || | ||| |||||||| || ||| || | || Sbjct 930725 GGTATGGACCTTCCTCCACGGCCATTTCGTTGGAAGCTTCCAAAGCAGCGTGGTACAATG 930666 Query 77431 TTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGT-AAA 77489 |||||||||| | | || || | || ||||| | |||||| ||| | | | ||| Sbjct 930665 TTTCGAAAATTTGAATGTTTAGTTGTTTAGCTTCTTCAGAATCAAATGGA-ACTCTCAAA 930607 Query 77490 AGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTG 77549 || ||||| | || || || || ||||| || | | |||| |||||||||||| | || Sbjct 930606 AGCATAAAAGTGTCGGCCAAACCTTGAACCCCTAAAGCAATTGGTCTATGTCTCATGTTT 930547 Query 77550 GAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTA 77609 || || | || | | ||||| || || | || || | | | || | ||||| Sbjct 930546 GAGTTTCTTGCAGTTTCCACTGGATAGTAGTTTCTATCAATGACTCTGTTCAAGTTTCTT 930487 Query 77610 ACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTTCCA------------ 77657 | ||||| | || || | | ||| |||| | | || | Sbjct 930486 GTGATGACTTTTGCGACTTCATGCAATTTTTTGAAATTATAAGTTTGAGTTTGGTTRTCT 930427 Query 77658 TCTATAAC-------AAACATGTTCAAAGCTATAGATGCTAGATTACAAACTGC---TAC 77707 ||| ||| ||| || | ||||| || || || | ||||||||||| | | Sbjct 930426 TCTGAAACGTTGATAAAAGCTGGT-AAAGCAATGGAAGCCAAGTTACAAACTGCAGTTTC 930368 Query 77708 CTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATTTGATAGTGCC 77767 |||||| | | ||||| | || || ||| | ||| ||||||| || || Sbjct 930367 GTCATTATCA---GAATATTCCACAATTTCACAACACAAATTGGATGATTTGATGGTTCC 930311 Query 77768 CAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCC 77827 || |||| ||||||| ||||| || || | || || |||| |||||| || || || Sbjct 930310 CAAGTTTTTTTGGTTGGATTTTTTGTTACAAGCATCTTTGTAAACAATAAATGGTGTACC 930251 Query 77828 GGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTT 77887 ||||| | |||| ||| | ||| | | ||| | | |||||| || | ||| Sbjct 930250 TGTTTCTGTTTGTGCTTCCAAAATGGCATACCATAATTTTTGAGCTTTAATTGTT--TTT 930193 Query 77888 GTATCGCCTCTCTCTTT--CATATTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACA 77945 || | | || |||| |||||| | |||| |||||| || | || ||||| Sbjct 930192 CTACCTCTTCCTTCTTGAACATATTTGTTGTATAATTTTTCAAAATCTTTACCATAAACA 930133 Query 77946 TCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACT 78005 ||| ||| ||||| |||| |||| | | |||| ||| || || ||| |||||| Sbjct 930132 TCACTCAAACCAGGAGCTTCACTTGGAGAAAATAATGTCCAATCTGAATTTTCTTTAACT 930073 Query 78006 CGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCT 78065 || |||||| | ||| || | ||| | ||| ||| | ||||| | |||| |||| Sbjct 930072 TTTTGCATAAATAAATCTGGAACCCACAAGGCAGGAAACAAATCTCTTGCTCTAATTTCT 930013 Query 78066 TCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 78125 || || || ||| || || ||| | ||| || | ||||||| ||||||||||||| Sbjct 930012 TCTTTACCATGATTTTTCCGAATATCAATAAAATCAAAAATATCACTATGCCATGGTTCT 929953 Query 78126 AGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTG 78185 | ||| | || | | | ||||||| ||||||||| || ||||| | |||||| || || Sbjct 929952 AAATAAAGAGCAAAAGCACCAGGTCTTTTATTACCACCTTGATCAACATATCTTGCAGTA 929893 Query 78186 TTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATA 78245 ||||| ||||||| | ||||||||| | || ||||| ||||| |||||||||| |||| Sbjct 929892 TTATTGAAAACTCTAATCATTGGAATCAATCCATTAGAAGTTCCGTTTGTTCCAGCAATA 929833 Query 78246 TAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGAT 78305 || || ||| | ||||||| ||| | || ||||| || || | ||||| Sbjct 929832 TATGAACCTGTTGATCTAATATTATGAATATGAAGACCAATTCCACCAGCAGTTTTAGAA 929773 Query 78306 ATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTA 78365 || | ||| || ||| || || || || || || || || ||||| |||| | Sbjct 929772 ATCAAAGCACATTCTTTTAAAGTGTCATAAATTCCATCAATTGAATCATCTTTCATAGCA 929713 Query 78366 AGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGAT 78425 | ||||||||| ||||||||| | ||| |||||||| |||||||| ||||| Sbjct 929712 ACAAGAAAACATGAAGACATTTGTGGTCTTGGAGTACCTGCATTGAATAATGTTGGAGAA 929653 Query 78426 GCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGATTCTATGTCC 78485 ||||| || || || || || | | ||| || ||||| | | || || || || Sbjct 929652 GCATGAGTGAAATATCTTAATGACATCAAATTATAAGTTTCCAAAACTTTYTCAATATC- 929594 Query 78486 CATTG--ATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCT 78543 ||| ||||||||| || || || | ||| | || ||| || ||||||||| | | | Sbjct 929593 -ATTACCATGAATTCCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAGCAATTT 929535 Query 78544 TATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATG 78603 ||| ||| | || || || ||| |||| |||||||||||||||||||| |||||| Sbjct 929534 GGCCATTGATTCTTAATAAATAAGATCTTTCTAAAGTTTTAAAACCAAAATAATTGTATT 929475 Query 78604 AAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATCTTTGTATTTGGTAACAAT-- 78661 ||| ||||| || |||| |||| || ||||| | |||||| | ||| |||||| Sbjct 929474 GAAAATCTCTATCATAAACAATAGCACTATTTAATACATCTTTATTTTTTTCAACAATTT 929415 Query 78662 -ATCCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGGATTAACATAGT 78720 || | | || | | ||| || |||||| || |||||||| ||||| ||| Sbjct 929414 GATAAACGTCATCACT---AATCATTGGAGATTTTAATCCATTTTTTTCATTAATATAAA 929358 Query 78721 TAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAGATTAGATA 78780 | ||||||| || || | | |||| ||||||| |||| || |||| ||| || | Sbjct 929357 AATATAAATCAGAAATAACTTGAGAAAATTGTTTTTTAGTTTGTTTATGTAAATTGGAAA 929298 Query 78781 CAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATGTTGTGTAGTACAAGTGGCTGCTA 78840 || ||||||||||| | | |||||||||||||| ||||| | || | Sbjct 929297 TTGCAATTCTTGCAGCCAATGTTGCATAATCAGGATGAATAGTAGTCATATAAGCACATG 929238 Query 78841 TTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATATAGTCCTTGAATAA 78900 |||| || || ||| |||| || || ||||| || ||||| | ||| | || ||| | Sbjct 929237 TTTCAGCAGCCAAATTATCCAATTCAATAGTAGTAACCCCTTCATAAACACCAGAAATGA 929178 Query 78901 CTTTCATGGCG--ATTTTGACAGGATCTACAAACTCAGTGTTCAATCCATAACATAATTT 78958 ||| | | | || |||||||| | | | | | ||| |||||||||||| | Sbjct 929177 --TTCTTTGTGTAATAGAAACAGGATCAATATGGTTTGGATCCAAACCATAACATAATCT 929120 Query 78959 TCTAATACGAGATGTGATTTTATCAAAT 78986 || | ||| ||||||||||||||| Sbjct 929119 GGCTATTCTAGAAGTGATTTTATCAAAT 929092 >seq14 Length=1659880 Score = 352 bits (390), Expect = 4e-92 Identities = 634/916 (69%), Gaps = 38/916 (4%) Strand=Plus/Plus Query 47831 TTGAGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTT 47890 || || ||| || || ||||||||| ||| || | ||| || || ||||| ||||| Sbjct 312431 TTTAGCCATGACACCTGCTTTTTGATAATCAGAAACTCTTTTTTCAAAGAAATTTGTTTT 312490 Query 47891 GCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTAACTGCATTATAA-Attttt- 47948 ||| |||| || || |||||||||||||||||||| || |||| ||| |||||| Sbjct 312491 TCCTGCCAAAGAGATGTTTTCCATAAAATCAAATGGGTTGGAAACATTGTAATATTTTTC 312550 Query 47949 -ttAAATCCTAATTCTGAAATCAGTCTATCTGCAACGAATTCTATATATCTTTTCATCAT 48007 ||| || ||| | | | |||||| ||||| ||||| | |||| ||||||| Sbjct 312551 GTTA---CCCAATGCAACCAATAATCTATCAGCAACAAATTCCACATATTGATTCATCAA 312607 Query 48008 TTCACAATTCATTCCTAT--AAGTTTAACTGGTAGAGCCTCCGTAAGAAACTCTTGTTCG 48065 || ||||||||||| ||| | || ||||| || || || | | || ||| Sbjct 312608 AGCAGCATTCATTCCTAACAAAGAT--ACAGGTAGTGCATCTTCAAAATATCTTTTTTCA 312665 Query 48066 ATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTCACTTGGTGGATACAA---- 48121 |||| || || || | || ||| | | |||| || || ||||| || Sbjct 312666 ATAGAAACTGCTTC----AGTA---ATGATTC--TTTCAGCAATTTTTGGAT-CAGGTTT 312715 Query 48122 ------CAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTCATCTCTACT 48175 |||||||| || | || |||||||||||| ||| || ||||||||||||| Sbjct 312716 GTTTTCCAAATGTTGGAATAATAGACATGCAAAATCGGTATGCAGTCCTTCATCTCTACA 312775 Query 48176 AATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATAT 48235 ||| ||||| || ||||| || | ||| ||||| | || ||| || | |||||| || Sbjct 312776 AATCAATTCATTTGAAAAAGTTAAACCTGGCATCAACCCCTTTTTCTTCAACCAAAAGAT 312835 Query 48236 TGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTC 48295 ||| || || |||||||||||||| | ||||| || || |||||||| | ||| || Sbjct 312836 TGCAGCAAAGGATCCAGAAAAGAAAACACCTTCCACAGCAGCAAATGCCACCAATCTTTC 312895 Query 48296 TCCGTAACTGGC---TTCGTTGTGTATCCACCGTTGTGCCCAATCAGCCTTCTTCTTT-A 48351 | || || ||||| || ||||| | ||||| || ||||| |||||| | Sbjct 312896 AGCAAAAAGTGCATCTTCGTCTTGAATCCATCTAATAGCCCATTCTGCCTT-TTCTTTGA 312954 Query 48352 CACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTATCTTTAACGT 48411 ||| |||||||| || ||||| || | ||| | |||| || |||||| | | Sbjct 312955 TTTGAGGAATTGTTTCAATGGCATTGAATAAAAAATCGCTTTCTTTTGGATCTTTGATAT 313014 Query 48412 AAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATC 48471 ||||||| || ||||| ||| |||| |||||| ||||| || || ||||||| Sbjct 313015 AAGTATCAATCAAAAGTGAATAAGTTTCACTGTGAATGTTTTCCATCATAATTTGAAATC 313074 Query 48472 CGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCT 48531 ||||||||||| | ||||| | || || || || | || ||| |||| ||||||| | Sbjct 313075 CGTAAAAACATTTGGCTTCAGGAATTTGCACTTCTGCACTAAAATTTTCAACCAAATTTT 313134 Query 48532 CATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTT 48591 |||| || ||||||||| ||| |||||||||||||| || |||| ||| || ||| Sbjct 313135 CATTAACAATTCCATCAGAAGCTGCAAAAAATGCTAAAACTCTACTAATGAAAAATCTTT 313194 Query 48592 CGTTGGAAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAG 48648 | || | ||| | |||||||| || | | |||||| |||| ||| | |||||| | Sbjct 313195 CATTTTCATTCATTCTGTTATTCCAATCGTGCAAATCTTTGGATAGATCAATTTCTTCTG 313254 Query 48649 CTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATTGGATTG 48708 | |||||||| || || ||||| |||||| | ||| || ||| |||| ||||| Sbjct 313255 CAGTCCAAAAAGAAGCTTCTGCACGTTTATAAGCTTGCCAAATTTCATGATATTTGATTG 313314 Query 48709 GGAAAATAACAAATCT 48724 | || | ||||||||| Sbjct 313315 GAAACAAAACAAATCT 313330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668652382880