Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq2 172 1e-37 seq17 170 4e-37 seq15 167 5e-36 >seq2 Length=821690 Score = 172 bits (190), Expect = 1e-37 Identities = 158/200 (79%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| | ||| ||||||||| ||||||||||||| | || | ||||| || Sbjct 193847 ACCAAATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 193788 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || ||||||||||| | |||||||||| |||||||| || ||||||||| Sbjct 193787 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGG 193728 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || ||||| ||| ||||||| ||||| |||| ||||||||| || ||||| |||||| Sbjct 193727 ATTTTGGCTTTGACGTTATCGATGGTGTCGGAAGATTCGACTTCTAGGGTGATAGTCTTA 193668 Query 283071 CCCGTCAAAGTCTTAACGAA 283090 || || || || || || || Sbjct 193667 CCAGTTAAGGTTTTGACAAA 193648 >seq17 Length=834807 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||| | ||| ||||||||| ||||||||||||| | || | ||||| || Sbjct 25729 ACCAAATGAAGRGTGGATTCTTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCC 25670 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || ||||||||||| | |||||||||| |||||||| || ||||||||| Sbjct 25669 AATTGTTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCTTTGTCTTGG 25610 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || ||||| || | || |||||||| |||| ||| ||||| | || || || ||| Sbjct 25609 ATTTTGGCTTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAGGTAATGGTTTTA 25550 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || |||||||| |||||||| || ||||| || Sbjct 25549 CCTGTCAAAGTTTTAACGAAAATTTGCATCTT 25518 >seq15 Length=1932387 Score = 167 bits (184), Expect = 5e-36 Identities = 161/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955 ||| | |||| || ||||||||||||||||| | | || | ||| || || | || Sbjct 1576850 ATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTG 1576791 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||| || ||||||||||| | ||||||||| ||||| ||||| |||||||||||||| Sbjct 1576790 TTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCCTCTTTGTCTTGGATCTT 1576731 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | || ||| | ||||| ||||| |||| ||||||||| | |||||| ||||| || || Sbjct 1576730 GGACTTGACGTTGTCGATCGTGTCTGAAGATTCGACTTCCAAAGTGATGGTCTTCCCAGT 1576671 Query 283076 CAAAGTCTTAACGAATATCTGCATTTT 283102 ||| || |||||||| || |||||||| Sbjct 1576670 CAATGTTTTAACGAAAATTTGCATTTT 1576644 Score = 147 bits (162), Expect = 5e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955 ||| | |||| || ||||||||||||||||| | | || | ||| || || | || Sbjct 1577078 ATGAAGCGTGGACTCCTTTTGGATGTTGTAGTCCGACAAAGTTCTGCCGTCTTCCAACTG 1577019 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||| || ||||||||||| | ||||||||| ||||| || || |||||||||||||| Sbjct 1577018 TTTACCAGCAAAGATCAATCTTTGTTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTT 1576959 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 | || ||| | ||||| |||||||| | |||||||| | |||||| || || || || Sbjct 1576958 GGACTTGACGTTGTCGATCGTGTCCGAGGACTCGACTTCCAAAGTGATGGTTTTCCCAGT 1576899 Query 283076 CAAAGTCTTAACGAATATCTGCAT 283099 ||| || |||||||| || ||||| Sbjct 1576898 CAATGTTTTAACGAAAATTTGCAT 1576875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738972007118