Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq16 125 1e-23 >seq16 Length=1651669 Score = 125 bits (138), Expect = 1e-23 Identities = 310/471 (66%), Gaps = 21/471 (4%) Strand=Plus/Plus Query 50445 GATCGTTTAGGATTTAATTACAGAAACAAAGGAGATTTAGGACCTGTTTACGGTTTTCAA 50504 ||| ||||||| | | | |||| |||| ||| | || |||||||| || |||||| Sbjct 123911 GATAGTTTAGGTCTGACAGATAGAAGAGAAGGTGATCTTGGTCCTGTTTATGGGTTTCAA 123970 Query 50505 TGGAGACATTTTGGAGCGCGTTACATAAATTGCGACGTAAATTACGAAGGTCAAGGCGTG 50564 ||||||||||||||||| |||| || || |||| || || || || || ||| Sbjct 123971 TGGAGACATTTTGGAGCAGAATACAAAACATGTGACGACAACTATGATGGCCAGGGCTAT 124030 Query 50565 GATCAACTGCAAAAAATTATAACGACGTTGAAAACAAACCCCGACGATCGGCGTATTTTA 50624 ||||||||| | ||||| | ||||| ||||| |||| | | ||| | Sbjct 124031 GATCAACTGGCTGAGGTTATATACAAACTGAAACACAACCCATACGACAGAAGAATTATC 124090 Query 50625 ATGACCGCCTGGAATCCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCATGTTTTA 50684 ||| || ||||| || | ||| | | ||| | ||| ||||| || |||||||| Sbjct 124091 TTGAGTGCTTGGAACCCTCCAGATTTCAAAAAAATGGCTTTGCCTCCTTGCCATGTTTTC 124150 Query 50685 TGTCAATTTTATG---------CCACAGACAA-------TGTTTTATCCTGTCA-ATGT- 50726 |||||||||||| | | ||| | || || || ||| ||| Sbjct 124151 AGTCAATTTTATGTGAGCTTTCCTAAAGAAGAAAACGCCCGTCCTAAACTTTCATGTGTT 124210 Query 50727 ---TATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCT 50783 || |||||||| ||||||||||||||| || || |||||| | || || || || Sbjct 124211 CTATACCAAAGATCTTGTGATATGGGTTTAGGGGTCCCATTCAACATTGCATCCTATGCA 124270 Query 50784 TTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATACG 50843 | |||| | |||| || ||| |||||| | || || ||||| ||||| || Sbjct 124271 CTGCTAACTAAAATGATTGCCAAAGTTTGTGATATGGATCCTGGTGAATTCATTCACACT 124330 Query 50844 TTAGGAGACGCTCATATTTACCTCGATCACGTCGATGCTTTAAAGGAGCAA 50894 || || ||||| || |||| |||||||| || ||||| || || ||| Sbjct 124331 TTGGGTGACGCCCACGTTTATAAAGATCACGTTGACGCTTTGAAAGAACAA 124381 Score = 98.7 bits (108), Expect = 1e-15 Identities = 132/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 63718 GTTAAAATAAAATTAAGATCTTCTAAAATACCAGAAATAGGTGATAAATTTGCTTCTTTT 63777 |||||| | | | | ||| | | ||| | || |||| ||||| |||||||| || Sbjct 411439 GTTAAAGTTAGAGTTAGAACCACCAAAGTGCCGCAAATTGGTGACAAATTTGCCTCCAG- 411497 Query 63778 ACA-GCTCAAAAAGGTACGTGTGGTATGATTTATCGACAAGAAGATATGCCTTTTACCAA 63836 ||| | |||||||||||| |||||| | ||| || |||||||||||| ||||| Sbjct 411498 ACACGGTCAAAAAGGTACCATTGGTATTACATATGGAAGAGAAGATATGCCATTTACGGC 411557 Query 63837 AGACGGTATCGTACCCGATCTCGTCATCAATCCACACGCTTTTCCCAGTCGTATGACCGT 63896 ||| ||||| || || ||| | |||||||||| || ||| |||| ||||||||| || Sbjct 411558 AGAAGGTATTGTTCCTGATTTGATCATCAATCCTCATGCTATTCCATCTCGTATGACTGT 411617 Query 63897 T 63897 | Sbjct 411618 T 411618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667075058246520