Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09-
27] 17 sequences; 11,458,415 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq17 147 5e-30
seq15 143 6e-29
seq2 143 6e-29
>seq17
Length=834807
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| |||||| | ||||| ||||| || ||| | || || ||| || |||
Sbjct 25524 CAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCTTCTGAC 25583
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || || |||||| || || || ||||||||||| || || || ||||| |||
Sbjct 25584 ACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAA 25643
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || ||||| | |||||||| || ||| | | || || ||| |
Sbjct 25644 AGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATT 25703
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||||||||| || || ||| | ||||||||| | |||
Sbjct 25704 CAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGA 25742
>seq15
Length=1932387
Score = 143 bits (158), Expect = 6e-29
Identities = 163/219 (74%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||||||||| ||||| | || || ||||| ||||| | || || || ||| |||
Sbjct 1576878 CAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCGGAC 1576937
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| || ||||||||||| || || || ||||| |||
Sbjct 1576938 ACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAACAA 1576997
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| | ||||| || || |||||| | ||||| || || ||| | | || || ||| ||
Sbjct 1576998 AGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAACATC 1577057
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
||||| || || || || ||| | ||||||||| | |||
Sbjct 1577058 CAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGA 1577096
Score = 136 bits (150), Expect = 1e-26
Identities = 183/253 (72%), Gaps = 5/253 (2%)
Strand=Plus/Plus
Query 177890 TTTAAGAAATATATAAAGTAAGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGG 177949
|||||| || ||| ||| || ||||||| |||||||||| ||||| | || ||
Sbjct 1576621 TTTAAGCAAGATAAAAACAAAAA--AAAATGC---AAATTTTCGTTAAAACATTGACTGG 1576675
Query 177950 AAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGAT 178009
|| || ||||| | || || ||| |||||||| ||||| |||||||| |||||
Sbjct 1576676 GAAGACCATCACTTTGGAAGTCGAATCTTCAGACACGATCGACAACGTCAAGTCCAAGAT 1576735
Query 178010 TCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCT 178069
|| |||||||| || || || || ||||| ||| || | ||||| || || |||||| |
Sbjct 1576736 CCAAGACAAAGAGGGGATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAGTT 1576795
Query 178070 CGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
||||| || || ||| | | || || ||| ||||||| || || || || ||| | ||
Sbjct 1576796 GGAAGACGGCAGAACTTTGTCGGACTACAACATCCAAAAGGAGTCCACGCTTCATTTAGT 1576855
Query 178130 TTTGAGACTCAGA 178142
|||||| | |||
Sbjct 1576856 CTTGAGATTGAGA 1576868
>seq2
Length=821690
Score = 143 bits (158), Expect = 6e-29
Identities = 160/214 (75%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988
||| || ||||| | || || || || |||||||| || || ||| || ||||||||
Sbjct 193647 TTTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCAT 193706
Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048
||| ||||||||| || || || ||||||||||| || || || ||||| ||| || |
Sbjct 193707 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 193766
Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||| || || ||||| | |||||||| || ||| | | || || ||| | |||||
Sbjct 193767 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 193826
Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142
|||||| || || ||| | ||||||||| | |||
Sbjct 193827 AGAATCCACTCTTCATTTGGTTTTGAGATTGAGA 193860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203730937812298
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |