Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20osmophila_20[genbank_20GCA_5F001747045.1_202016-09- 27] 17 sequences; 11,458,415 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq17 147 5e-30 seq15 143 6e-29 seq2 143 6e-29 >seq17 Length=834807 Score = 147 bits (162), Expect = 5e-30 Identities = 164/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| |||||| | ||||| ||||| || ||| | || || ||| || ||| Sbjct 25524 CAAATTTTCGTTAAAACTTTGACAGGTAAAACCATTACCTTGGAAGTTGAATCTTCTGAC 25583 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| || || || ||||||||||| || || || ||||| ||| Sbjct 25584 ACTATTGACAATGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAA 25643 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || ||||| | |||||||| || ||| | | || || ||| | Sbjct 25644 AGATTGATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATT 25703 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||||| || || ||| | ||||||||| | ||| Sbjct 25704 CAAAAAGAATCCACYCTTCATTTGGTTTTGAGATTGAGA 25742 >seq15 Length=1932387 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| ||||| | || || ||||| ||||| | || || || ||| ||| Sbjct 1576878 CAAATTTTCGTTAAAACATTGACTGGGAAAACCATCACTTTGGAAGTCGAGTCCTCGGAC 1576937 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| || ||||||||||| || || || ||||| ||| Sbjct 1576938 ACGATCGACAACGTCAAGTCCAAGATCCAAGACAAAGAAGGGATTCCACCAGACCAACAA 1576997 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || |||||| | ||||| || || ||| | | || || ||| || Sbjct 1576998 AGATTGATCTTTGCTGGTAAACAGTTGGAAGACGGCAGAACTTTGTCGGACTACAACATC 1577057 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||| || || || || ||| | ||||||||| | ||| Sbjct 1577058 CAAAAGGAGTCCACGCTTCATTTAGTTTTGAGATTGAGA 1577096 Score = 136 bits (150), Expect = 1e-26 Identities = 183/253 (72%), Gaps = 5/253 (2%) Strand=Plus/Plus Query 177890 TTTAAGAAATATATAAAGTAAGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGG 177949 |||||| || ||| ||| || ||||||| |||||||||| ||||| | || || Sbjct 1576621 TTTAAGCAAGATAAAAACAAAAA--AAAATGC---AAATTTTCGTTAAAACATTGACTGG 1576675 Query 177950 AAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGAT 178009 || || ||||| | || || ||| |||||||| ||||| |||||||| ||||| Sbjct 1576676 GAAGACCATCACTTTGGAAGTCGAATCTTCAGACACGATCGACAACGTCAAGTCCAAGAT 1576735 Query 178010 TCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCT 178069 || |||||||| || || || || ||||| ||| || | ||||| || || |||||| | Sbjct 1576736 CCAAGACAAAGAGGGGATTCCACCAGACCAACAAAGATTGATCTTTGCTGGTAAACAGTT 1576795 Query 178070 CGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || ||| | | || || ||| ||||||| || || || || ||| | || Sbjct 1576796 GGAAGACGGCAGAACTTTGTCGGACTACAACATCCAAAAGGAGTCCACGCTTCATTTAGT 1576855 Query 178130 TTTGAGACTCAGA 178142 |||||| | ||| Sbjct 1576856 CTTGAGATTGAGA 1576868 >seq2 Length=821690 Score = 143 bits (158), Expect = 6e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||| || ||||| | || || || || |||||||| || || ||| || |||||||| Sbjct 193647 TTTTGTCAAAACCTTAACTGGTAAGACTATCACCCTAGAAGTCGAATCTTCCGACACCAT 193706 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 ||| ||||||||| || || || ||||||||||| || || || ||||| ||| || | Sbjct 193707 CGATAACGTCAAAGCCAAAATCCAAGACAAAGAAGGTATTCCACCTGACCAACAAAGATT 193766 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || ||||| | |||||||| || ||| | | || || ||| | ||||| Sbjct 193767 GATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGACTACAACATTCAAAA 193826 Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||||| || || ||| | ||||||||| | ||| Sbjct 193827 AGAATCCACTCTTCATTTGGTTTTGAGATTGAGA 193860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730937812298