Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq13 201 1e-46 >seq13 Length=415809 Score = 201 bits (222), Expect = 1e-46 Identities = 581/885 (66%), Gaps = 13/885 (1%) Strand=Plus/Plus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 |||| |||||| ||| | ||||| ||||| || || || || |||| ||||| |||| Sbjct 173035 TTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTTT 173094 Query 15972 CCATAAAATCAAAGGGATTAGTAGC--TGAAAATATCTTAGAGTACCCCAGTTCCGTAAC 16029 ||||||| || || || || || | |||| | | || | |||| || ||| Sbjct 173095 CCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGT-TACCTAAGGCAACTAA- 173152 Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG 16089 ||||||||| || |||||||| | |||||| ||||| || ||| || || | | Sbjct 173153 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAA 173212 Query 16090 TCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGAT 16149 | || |||| || | || || | ||| || |||| ||||| ||| || Sbjct 173213 TGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAATAAT 173272 Query 16150 ATCGGTGGCTCGTGTTTCAGAC-GGTGTATGGTTTAGGTGTTTAAACATTAGACACGCGA 16208 || | | | ||| | ||| | | |||| ||| |||| |||||| || | Sbjct 173273 -TCTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAGTGGGAGAACAATAGACAGGCAA 173331 Query 16209 AGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCA 16268 |||| ||||| ||||| ||||| | ||| | ||||||||| ||||| || || |||| Sbjct 173332 AGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCA 173391 Query 16269 TTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCT 16328 | || |||||| |||||||| || ||||||||||| || || || || | ||| | Sbjct 173392 TCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTT 173451 Query 16329 CAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATT 16388 |||||| |||||||| | | || ||| || || ||| || |||| |||||||| Sbjct 173452 CAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATC 173511 Query 16389 TCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACAATT 16448 | ||||||| || |||| || || | || |||||||| || || || || Sbjct 173512 TAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAAGA 173571 Query 16449 TCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTCTGAGT 16508 || ||||||| ||| | || || || || | | |||| || |||| |||| Sbjct 173572 AATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGAGT 173631 Query 16509 GTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTGTACTT 16568 | ||||| || || || || || || ||||| || ||| || | ||||| |||| Sbjct 173632 GAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAACTT 173691 Query 16569 CCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCAAAAAACG 16628 | | | || ||| ||| ||| ||||| || ||||| ||| |||||||| || | Sbjct 173692 CAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAAAG 173751 Query 16629 CCAATATGTGCTT--AATGAAATATTTTTC---GTCAGATGTAAGAATATGCCAATCTTT 16683 |||| | ||| ||||||| || |||| ||| | ||| |||||| | Sbjct 173752 CCAAGA--CTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTG 173809 Query 16684 TAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTTATA 16743 |||||| || || | ||| | |||||| | ||||| || ||| | || | ||||| Sbjct 173810 TAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATA 173869 Query 16744 CATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCT 16788 || |||||| || | ||| || || |||| ||| |||| Sbjct 173870 GGCTTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCT 173914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511414137900120