Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq4 423 2e-113 seq13 205 1e-47 >seq4 Length=144043 Score = 423 bits (468), Expect = 2e-113 Identities = 1491/2296 (65%), Gaps = 71/2296 (3%) Strand=Plus/Minus Query 52808 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 52867 ||||||||||| | || || || | || || | | |||||||| || || || | | Sbjct 47191 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 47132 Query 52868 CCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCGGATC-TGCTA 52925 || ||||| ||||| || ||||| |||| || || | || | || | Sbjct 47131 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATGGTTGGGGCCATG--A 47074 Query 52926 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 52985 |||| || ||||| || ||| |||||| ||||| ||| || || |||||||| | | Sbjct 47073 TATGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCAGCCATATCAA 47014 Query 52986 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 53044 |||| |||||||||| | |||||||| ||||||||| || || ||| || |||| ||| Sbjct 47013 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 46955 Query 53045 AGGTTTGT--ATTCT-GAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 53101 | ||||| ||| | | ||||| ||| | | || || || ||| || | ||| Sbjct 46954 ATGTTTGGTAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 46895 Query 53102 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 53160 | ||| ||| | | || |||| | | | | | || || || | ||| |||| Sbjct 46894 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 46836 Query 53161 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 53220 ||||| || ||| | || ||| || ||| || | ||||| | | | ||||| | Sbjct 46835 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTA 46776 Query 53221 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 53280 || |||||||| | ||| || ||||| |||||||| || |||||||| ||||| | Sbjct 46775 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 46716 Query 53281 ACCGTATGTTCTGATTTTATCTTTTAGAGGTTC---CCAATTCCA-AAGATCCGACGGTA 53336 ||||| | || ||| | || | ||| ||||| ||| ||| | | || Sbjct 46715 ACCGTGCTTGGCAATCTTAGCCTTCAA---TTCAGTCCAATCCCATAAGGTA-GTTGGAG 46660 Query 53337 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 53396 |||| ||||| || ||| | | || || ||| | || | | Sbjct 46659 CAACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAG 46600 Query 53397 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 53456 | || | |||||| | ||||||| |||| || || || ||| ||| |||||||| Sbjct 46599 CATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGG 46540 Query 53457 TTTCGAAGATCTTCTTATTTAGATCTTGTGCTTC--CAGGCTATCAAATGGATAATTTAA 53514 ||||||| || | | || | || | |||| ||| ||| |||||| |||| Sbjct 46539 TTTCGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGA--ATCGAATGGAACTCTTAA 46482 Query 53515 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 53574 | ||||| | || || || ||||||||||| | | |||||||| |||||| | || Sbjct 46481 CATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTT 46422 Query 53575 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCT 53634 || || ||| | || ||| ||||| || | || |||| || | ||| | Sbjct 46421 GGATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTAAGTTCTT 46362 Query 53635 GACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA---TTG------TCCATC 53685 |||| || || || || | ||||| || ||| | ||| | ||| Sbjct 46361 AGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCATAAGTTTGAGTCTTTTGATC 46302 Query 53686 TA---------TTACAAACA-TGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCT 53735 | ||||||| || | || |||| ||| || | |||||||| || | Sbjct 46301 TTCGGAGACCTTTACAAAGGCTGGT-AAGGCAACAGAAGCTAAGTTACAAACAGCAGTTT 46243 Query 53736 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 53795 | ||| |||| | |||| | || ||| || | ||| | | || || || || | Sbjct 46242 CCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCA 46183 Query 53796 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAG 53855 | || | ||||||| ||||| ||||| |||||||| |||| |||||| || ||||||| Sbjct 46182 AGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAG 46123 Query 53856 TTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGT 53915 |||| | |||| ||||| || || | ||| | ||||||| || | ||| | Sbjct 46122 TTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTC--TTTCT 46065 Query 53916 ATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATT 53973 | |||| |||| ||||||| | ||| | |||||| || || || || ||| Sbjct 46064 ACCTCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCATCACCATAAGCATC 46005 Query 53974 GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCG 54033 ||| |||||| |||| ||| | | || | ||| || || | |||| |||| Sbjct 46004 ACTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCT 45945 Query 54034 TTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTC 54093 ||||| || | ||||||||||| | |||| |||| |||||| | ||| ||| || Sbjct 45944 CTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTC 45885 Query 54094 GTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAA 54153 || || ||| ||| | | |||| ||| | | |||||||| ||||| ||||| | Sbjct 45884 CTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAG 45825 Query 54154 GTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTT 54213 ||| | | | | ||||| | |||||| || || ||||| | |||||| || ||||| Sbjct 45824 GTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACGTATCTGGCAGTGTT 45765 Query 54214 ATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATA 54273 || ||||||| | ||| || || | ||||||||| | ||||||||| || | || || Sbjct 45764 GTTGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTA 45705 Query 54274 GCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGAT 54333 ||| ||| | || || ||| || ||| || || || || | ||||| || Sbjct 45704 AGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTTAGAAAT 45645 Query 54334 TAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAG 54393 | || ||| ||||| ||||||||||| || || ||| ||||||| |||| || Sbjct 45644 TTGAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAAT 45585 Query 54394 TAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGC 54453 || ||||| ||||||||| | | ||| || ||||| |||| || |||||||| Sbjct 45584 TAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGC 45525 Query 54454 GTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTAT-ATCCC 54512 || ||||| || ||| ||| | | ||||| || ||||| || || || | | Sbjct 45524 ATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTC 45465 Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572 | | || || || || || || | ||| | || || || ||||||||||||||||| Sbjct 45464 ACCG-TGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTTAC 45406 Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGA 54630 || || |||| ||||| ||| ||||||| || || ||||||||||||||||| ||| Sbjct 45405 CATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGA 45346 Query 54631 AAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACATC 54690 || |||| ||| | |||||| | | | |||| || | ||| |||| | Sbjct 45345 AA--TCTCTATCGAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTT- 45289 Query 54691 CATGGTAATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTT 54747 || || | | | ||||| || ||||| |||||| | || || ||||| Sbjct 45288 --TGTAAACATCATCAGAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAGTT 45231 Query 54748 AAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TGAT 54805 |||| || | || |||| | ||||| |||||| |||| ||||||| || |||| Sbjct 45230 GTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGAT 45171 Query 54806 ACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGC 54864 ||| ||||| ||||| |||| |||||||| ||||| || || || || ||| Sbjct 45170 --GGCGATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCACA 45114 Query 54865 TATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGAT 54924 |||| || | | | || ||||| | || || || || | || | || ||| Sbjct 45113 AGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAGAT 45054 Query 54925 AACCTTCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAAT 54982 || ||| | | ||||| | |||||| ||||| | || | ||| ||||| |||||| Sbjct 45053 AA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATAAT 44996 Query 54983 TTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGTTT 55041 | ||| | ||||| ||||||||||| ||| | ||| | ||| | || ||| Sbjct 44995 CTAGCAATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTTTT 44937 Query 55042 AATGACAAACATTTTT 55057 || |||||||| ||| Sbjct 44936 AACAACAAACATGTTT 44921 >seq13 Length=415809 Score = 205 bits (226), Expect = 1e-47 Identities = 586/888 (66%), Gaps = 20/888 (2%) Strand=Plus/Plus Query 23844 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 23903 ||||| || ||| || | ||||| || ||||| || ||||| |||| ||||| ||| Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093 Query 23904 TCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATCCC-AATTCAGAAAT 23962 ||||| || ||| |||| ||||| ||||| | | ||||| | || || || | Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAG-CTTTTCGTTACCTAAGGCAACTAA 173152 Query 23963 CAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAATTCATTCCTATAAG 24022 |||||||| || ||||| || | |||| ||||| | ||| |||||| || | | Sbjct 173153 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAA 173212 Query 24023 TTTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAA 24081 | |||||||| || || || || |||| |||||| || || || | |||| Sbjct 173213 TGCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAA 173271 Query 24082 TAGATCTTAC--TGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATG 24138 | |||| | || | || || ||| | | ||| || |||| | ||| | Sbjct 173272 T---TCTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAGTGGGAGAACAATAGACAGG 173328 Query 24139 CGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGG 24198 | || || |||| ||| || ||||||| || ||||||||||| || || | || | Sbjct 173329 CAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAG 173388 Query 24199 GCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTC 24258 |||| | || || || | ||| || || | |||||||| ||||| || || | | Sbjct 173389 GCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACAC 173448 Query 24259 CTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCC 24315 |||| || || ||||| |||| |||||||| || | | || | | || || |||| Sbjct 173449 CTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCC 173508 Query 24316 ACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGA 24375 | | |||||| || ||||| | || | ||| || || |||||||| || || | Sbjct 173509 ATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATA 173568 Query 24376 GATAGtttttttCATTACTATCTTTAACATATGTATC-AATCA-AAAGACTATACATTTC 24433 | | ||||| || ||| || | ||||| || ||| | ||||| ||| |||| Sbjct 173569 AGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGA--ATAAGTTTC 173626 Query 24434 CGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTG 24493 || ||||||||||| || ||||| || ||||||||||| |||| || | ||| || Sbjct 173627 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 173686 Query 24494 TACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAA 24553 ||||| | | || ||| | || |||||||| || || || ||| || ||||| Sbjct 173687 AACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 173746 Query 24554 AAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATC 24610 || ||||| || | || ||| || |||| | | | | | ||||||||||| Sbjct 173747 GAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATC 173806 Query 24611 ATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTT 24670 | | ||| ||||| | ||| | |||||| | ||||| || || || || || | || Sbjct 173807 GTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTT 173866 Query 24671 ATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 ||| | ||| || || | ||| |||||| || | ||| ||||| Sbjct 173867 ATAGGCTTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCT 173914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721295717680