Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq1 163 2e-35 >seq1 Length=1362551 Score = 163 bits (180), Expect = 2e-35 Identities = 413/627 (66%), Gaps = 17/627 (3%) Strand=Plus/Minus Query 97018 CTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCA 97077 || ||||||| || || ||| | | |||||| | |||| | |||| ||||||| Sbjct 1128936 CTTGGAGTTCTTTCAATTTGTTCTTTCAAAGCATCTACATGATCCTTGTAAACGTGAGCA 1128877 Query 97078 TCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAA 97137 || || | |||||||||||||| ||| | | | |||| || | || ||||| | Sbjct 1128876 TCACCCATGGTGTGAATAAATTCACCACAATCCATATCAACAACCTTTGCAATCATTCTG 1128817 Query 97138 GTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTT 97197 || || | || ||| ||||||||| ||||| || || | ||||||||| |||||| Sbjct 1128816 GTCAACAAAGCATAAGAAGCAATGTTGAAAGGAACACCCAACCCCATATCACAAGATCTT 1128757 Query 97198 TGATATAACTGACAGGAAA------GCTTTCCATC---------ACACACATAAAACTGA 97242 || ||||| ||| || | ||||| || | | ||||| || ||| Sbjct 1128756 TGGTATAAGATACATGACAATTGAGGCTTTTGGTCTTTAGGGAAAGAAACATAGAATTGA 1128697 Query 97243 CTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACAC 97302 | || || || || || || | |||||||| || ||| |||||||||| || Sbjct 1128696 CAGAAAACGTGGCATGGCGGAAGAGCCATTTTCTTAAAGTCTGGTGGATTCCAAGCAGAC 1128637 Query 97303 ATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTGA 97362 || | |||||||||||| || || || | | ||| |||||| | |||||||| Sbjct 1128636 ATGATGATTCTTCTATCGTAAGGATTGGTCTTCAACTTATGAATTATATCGCTTAATTGA 1128577 Query 97363 TCAACGCCTTCTCCACCATAATT-GTGCTTAAGACCTTGATATTCTGCTCCAAAATGCCT 97421 || |||| || | ||| | | | | |||||| || |||||||| || Sbjct 1128576 TCGTATCCTTTGTTTGTGTAGTCAGTG-TGACAATCAACATATTCAGCACCAAAATGTCT 1128518 Query 97422 CCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTT 97481 ||||||||| ||||||||||| || | || ||||||||||| ||| || ||||| Sbjct 1128517 CCATTGGAAACCATAAACAGGACCTAAATCACCTTCTTCTCTGTCAGTTAACCCAAGAGA 1128458 Query 97482 ATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAGATGCTGCAAGCTC 97541 ||||| || | ||| ||||| |||||||||| | || || | | || | Sbjct 1128457 ATCTAGGTATTCACGAGAACCATTACCATCCCAAATTTTGACGCCTTCTTTTTGTAGATT 1128398 Query 97542 TTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAACACCTCTCCAAAA 97601 |||| | | ||| ||| | | |||||| | | |||| | | || | || | ||| Sbjct 1128397 TTTGTTATTGGTATCTCCCTTAACAAACCAAAGAAGTTCTACTATAATAGCTTTGGTAAA 1128338 Query 97602 TACTCTCTTAGTTGTTAAGAGAGGAAA 97628 |||||| || |||||||| | |||||| Sbjct 1128337 TACTCTTTTTGTTGTTAATAAAGGAAA 1128311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783826716370