Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq1 170 3e-37
seq18 118 2e-21
>seq1
Length=1362551
Score = 170 bits (188), Expect = 3e-37
Identities = 434/658 (66%), Gaps = 18/658 (3%)
Strand=Plus/Minus
Query 205317 TCtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCC 205376
||||||||||| ||| | || ||| |||| || | ||| | ||||| ||| || |
Sbjct 1128964 TCTTTTTATTTCTAAAGTAGGGAATTCTCTTGGAGTTCTTTCAATTTGTTCTTTCAAAGC 1128905
Query 205377 ATTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTT 205436
|| | ||||| || | || |||| ||| || | |||||||||||| |
Sbjct 1128904 ATCTACATGATCCTTGTAAACGTGAGCATCACCCATGGTGTGAATAAATTCACCACAATC 1128845
Query 205437 TAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496
| || | | | ||||||||| ||||| ||| |||| ||||| || || ||
Sbjct 1128844 CATATCAACAACCTTTGCAATCATTCTGGTCAACAAAGCATAAGAAGCAATGTTGAAAGG 1128785
Query 205497 TACACCTAAACCCATATCAGCTGATCTTTG-------ATACATTTGACATGTAAGATATT 205549
||||| || ||||||||| |||||||| |||||| |||| | || ||
Sbjct 1128784 AACACCCAACCCCATATCACAAGATCTTTGGTATAAGATACAT--GACAATTGAGGCTTT 1128727
Query 205550 TATTATTAATT-------ACATGAAATTGT-ACAAAACAATGACAAGGTGGTATAACCAT 205601
| | || | |||| ||||| | ||||| || || || || | | ||||
Sbjct 1128726 TGGTCTTTAGGGAAAGAAACATAGAATTGACAGAAAACG-TGGCATGGCGGAAGAGCCAT 1128668
Query 205602 ATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttatt 205661
|| | || ||| |||||||| || | | || || ||||| | ||| || |
Sbjct 1128667 TTTCTTAAAGTCTGGTGGATTCCAAGCAGACATGATGATTCTTCTATCGTAAGGATTGGT 1128608
Query 205662 ttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATC 205721
|| | |||| || |||| |||||||||| |||||| ||||| || | || |
Sbjct 1128607 CTTCAACTTATGAATTATATCGCTTAATTGATCGTATCCTTTGTTTGTGTAGTCAGTGTG 1128548
Query 205722 CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATC 205781
||||| ||||| |||||||||||| | |||||| ||||||||||| |||||||||||
Sbjct 1128547 ACAATCAACATATTCAGCACCAAAATGTCTCCATTGGAAACCATAAACAGGACCTAAATC 1128488
Query 205782 ACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatgatccattttcatc 205841
|||||||| ||| ||| | || ||| | | || |||| || ||||| ||||
Sbjct 1128487 ACCTTCTTCTCTGTCAGTTAACCCAAGAGAATCTAGGTATTCACGAGAACCATTACCATC 1128428
Query 205842 ccaaatatggattcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCA 205901
|||||| | || |||| |||| |||| | || |||| || ||| | ||||||
Sbjct 1128427 CCAAATTTTGACGCCTTCTTTTTGTAGATTTTTGTTATTGGTATCTCCCTTAACAAACCA 1128368
Query 205902 TAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAAT 205959
| | |||| | | ||| || | ||| | | ||||||||| ||||| ||||||
Sbjct 1128367 AAGAAGTTCTACTATAATAGCTTTGGTAAATACTCTTTTTGTTGTTAATAAAGGAAAT 1128310
Score = 149 bits (164), Expect = 9e-31
Identities = 175/237 (74%), Gaps = 0/237 (0%)
Strand=Plus/Minus
Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597
||||||||| || |||| || ||||| || || || || ||| | ||| | ||| |
Sbjct 277603 AATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTC 277544
Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657
|||| | || ||| | || ||||| ||||| ||||||||||| |||||||||||
Sbjct 277543 TGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCA 277484
Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717
|||||| | || || || || || |||||||| ||| || |||| ||| || || ||
Sbjct 277483 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAA 277424
Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774
|||||||||||||| ||||| || || || ||| | ||| |||||||| ||| ||
Sbjct 277423 CATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGGTGGTAAGAA 277367
>seq18
Length=128875
Score = 118 bits (130), Expect = 2e-21
Identities = 115/148 (78%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682
|| || ||||| || |||||||| ||||||||||||||||| | || ||||| || |||
Sbjct 90892 AAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTAATCTTTGCTGGTAAA 90951
Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742
|||||||| || || |||| ||| ||||| || || ||||||||||| ||| | ||
Sbjct 90952 CAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAAGAATCTACTCTACAC 91011
Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTA 124770
|| ||| || | || |||||||| |||
Sbjct 91012 TTAGTTCTAAGATTGAGAGGTGGTGTTA 91039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755455612828800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |