Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq1 170 3e-37 seq18 118 2e-21 >seq1 Length=1362551 Score = 170 bits (188), Expect = 3e-37 Identities = 434/658 (66%), Gaps = 18/658 (3%) Strand=Plus/Minus Query 205317 TCtttttatttttaattttGGAAATGGGTTTGGTGTACGTTCTAATTGtttttttAATCC 205376 ||||||||||| ||| | || ||| |||| || | ||| | ||||| ||| || | Sbjct 1128964 TCTTTTTATTTCTAAAGTAGGGAATTCTCTTGGAGTTCTTTCAATTTGTTCTTTCAAAGC 1128905 Query 205377 ATTAATATGATTAACATATATATGTGCATTACCAATATTATGAATAAATTCATATGGTTT 205436 || | ||||| || | || |||| ||| || | |||||||||||| | Sbjct 1128904 ATCTACATGATCCTTGTAAACGTGAGCATCACCCATGGTGTGAATAAATTCACCACAATC 1128845 Query 205437 TAAATTAGTTAAATGTGCAATCATATAAGTCAATAAACTATAACTAGCAACATTAAATGG 205496 | || | | | ||||||||| ||||| ||| |||| ||||| || || || Sbjct 1128844 CATATCAACAACCTTTGCAATCATTCTGGTCAACAAAGCATAAGAAGCAATGTTGAAAGG 1128785 Query 205497 TACACCTAAACCCATATCAGCTGATCTTTG-------ATACATTTGACATGTAAGATATT 205549 ||||| || ||||||||| |||||||| |||||| |||| | || || Sbjct 1128784 AACACCCAACCCCATATCACAAGATCTTTGGTATAAGATACAT--GACAATTGAGGCTTT 1128727 Query 205550 TATTATTAATT-------ACATGAAATTGT-ACAAAACAATGACAAGGTGGTATAACCAT 205601 | | || | |||| ||||| | ||||| || || || || | | |||| Sbjct 1128726 TGGTCTTTAGGGAAAGAAACATAGAATTGACAGAAAACG-TGGCATGGCGGAAGAGCCAT 1128668 Query 205602 ATTTTCAACATCTATAGGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttatt 205661 || | || ||| |||||||| || | | || || ||||| | ||| || | Sbjct 1128667 TTTCTTAAAGTCTGGTGGATTCCAAGCAGACATGATGATTCTTCTATCGTAAGGATTGGT 1128608 Query 205662 ttttattttatttatAATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATC 205721 || | |||| || |||| |||||||||| |||||| ||||| || | || | Sbjct 1128607 CTTCAACTTATGAATTATATCGCTTAATTGATCGTATCCTTTGTTTGTGTAGTCAGTGTG 1128548 Query 205722 CATATCAATATATTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATC 205781 ||||| ||||| |||||||||||| | |||||| ||||||||||| ||||||||||| Sbjct 1128547 ACAATCAACATATTCAGCACCAAAATGTCTCCATTGGAAACCATAAACAGGACCTAAATC 1128488 Query 205782 ACCTTCTTTTCTATCATTAAAACCACGtttttttatatattttaatgatccattttcatc 205841 |||||||| ||| ||| | || ||| | | || |||| || ||||| |||| Sbjct 1128487 ACCTTCTTCTCTGTCAGTTAACCCAAGAGAATCTAGGTATTCACGAGAACCATTACCATC 1128428 Query 205842 ccaaatatggattcctttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCA 205901 |||||| | || |||| |||| |||| | || |||| || ||| | |||||| Sbjct 1128427 CCAAATTTTGACGCCTTCTTTTTGTAGATTTTTGTTATTGGTATCTCCCTTAACAAACCA 1128368 Query 205902 TAATAATTCTTCAACAATTCCTCTCCAAAACATTGATTTTGTTGTAAATAATGGAAAT 205959 | | |||| | | ||| || | ||| | | ||||||||| ||||| |||||| Sbjct 1128367 AAGAAGTTCTACTATAATAGCTTTGGTAAATACTCTTTTTGTTGTTAATAAAGGAAAT 1128310 Score = 149 bits (164), Expect = 9e-31 Identities = 175/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 124538 AATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAA 124597 ||||||||| || |||| || ||||| || || || || ||| | ||| | ||| | Sbjct 277603 AATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTC 277544 Query 124598 TGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCA 124657 |||| | || ||| | || ||||| ||||| ||||||||||| ||||||||||| Sbjct 277543 TGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGATCA 277484 Query 124658 ACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAA 124717 |||||| | || || || || || |||||||| ||| || |||| ||| || || || Sbjct 277483 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAA 277424 Query 124718 TATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 |||||||||||||| ||||| || || || ||| | ||| |||||||| ||| || Sbjct 277423 CATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGGTGGTAAGAA 277367 >seq18 Length=128875 Score = 118 bits (130), Expect = 2e-21 Identities = 115/148 (78%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || ||||| || |||||||| ||||||||||||||||| | || ||||| || ||| Sbjct 90892 AAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTAATCTTTGCTGGTAAA 90951 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 |||||||| || || |||| ||| ||||| || || ||||||||||| ||| | || Sbjct 90952 CAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAAGAATCTACTCTACAC 91011 Query 124743 TTGGTTTTACGTTTACGAGGTGGTATTA 124770 || ||| || | || |||||||| ||| Sbjct 91012 TTAGTTCTAAGATTGAGAGGTGGTGTTA 91039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755455612828800