Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq13 251 7e-62
>seq13
Length=415809
Score = 251 bits (278), Expect = 7e-62
Identities = 578/860 (67%), Gaps = 19/860 (2%)
Strand=Plus/Plus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
|||||||| ||| ||||||||||||||||||||| || || || |||| || || |||
Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093
Query 16004 TCCATAAAATCAAAAGGATTTTT-----TGAACAATAGTATTTATCGCATCCCAATTCCA 16058
|||||||| || || || || | |||||| || ||| || || | |
Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGC-----TTTTCGTTACCTAAGGCAA 173148
Query 16059 ACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTA 16118
||||||||||| || |||||||| | ||| || ||||||| |||| ||||| || |
Sbjct 173149 CTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAA 173208
Query 16119 TTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGA 16178
|||| ||| || || || || || | | ||||| || | ||| |||||| |
Sbjct 173209 GTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAA 173268
Query 16179 TTATATCTCTTACTACACTATTTAAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAA 16237
| || ||| | | | || | | | || ||| |||||| |||| || |||
Sbjct 173269 TAAT-TCTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAGTGGGAGAACAATAGACAG 173327
Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297
||||| ||| ||| || ||||| || |||| || || ||||| || || || | |||
Sbjct 173328 GCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCA 173387
Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357
||||| | || ||| || | ||| || ||||| |||||||||||||| || || | |
Sbjct 173388 GGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACA 173447
Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417
|||||||| || ||||| ||||||| || ||| | || | ||| || |||
Sbjct 173448 CCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATC 173507
Query 16418 cattttttagcccaatttgctttttgtttAA-CACAGTTCATGTTCTCTATTGCATTAAA 16476
||| | ||||||| | || |||| |||| ||| || | ||||| || || ||
Sbjct 173508 CATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAG-GAATAGTTTCTATAGCGTTTAA 173566
Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536
||| ||| ||||| || ||| || || || |||| || |||| ||| ||||
Sbjct 173567 TAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTC 173626
Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596
|| ||||| || ||||| || || ||||| || || || ||||||| | |||||
Sbjct 173627 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 173686
Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656
||||||| | || |||| | |||||||| || || || ||||| ||| |||||
Sbjct 173687 AACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 173746
Query 16657 -AAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGTTTTA-ACCAGT 16712
||| |||| | | | ||| ||| | |||| || || | | | ||| ||| |
Sbjct 173747 GAAAGCCAAGACTCT-TGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAAT 173805
Query 16713 CAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTT 16772
| ||||| || || ||||||| ||||| | ||||| |||||||| | || | |
Sbjct 173806 CGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCT 173865
Query 16773 TATACATTTTCCATATGTCT 16792
|||| || ||| || |||
Sbjct 173866 TATAGGCTTCCCAAATTTCT 173885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462511762962600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |