Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq13 251 7e-62 >seq13 Length=415809 Score = 251 bits (278), Expect = 7e-62 Identities = 578/860 (67%), Gaps = 19/860 (2%) Strand=Plus/Plus Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003 |||||||| ||| ||||||||||||||||||||| || || || |||| || || ||| Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093 Query 16004 TCCATAAAATCAAAAGGATTTTT-----TGAACAATAGTATTTATCGCATCCCAATTCCA 16058 |||||||| || || || || | |||||| || ||| || || | | Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGC-----TTTTCGTTACCTAAGGCAA 173148 Query 16059 ACAATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTA 16118 ||||||||||| || |||||||| | ||| || ||||||| |||| ||||| || | Sbjct 173149 CTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAA 173208 Query 16119 TTAATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGA 16178 |||| ||| || || || || || | | ||||| || | ||| |||||| | Sbjct 173209 GTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAA 173268 Query 16179 TTATATCTCTTACTACACTATTTAAC-GGAGGGTTTAATAAGTGTTTAAACATTATACAA 16237 | || ||| | | | || | | | || ||| |||||| |||| || ||| Sbjct 173269 TAAT-TCTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAGTGGGAGAACAATAGACAG 173327 Query 16238 GCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCT 16297 ||||| ||| ||| || ||||| || |||| || || ||||| || || || | ||| Sbjct 173328 GCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCA 173387 Query 16298 GGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATA 16357 ||||| | || ||| || | ||| || ||||| |||||||||||||| || || | | Sbjct 173388 GGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACA 173447 Query 16358 CCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatc 16417 |||||||| || ||||| ||||||| || ||| | || | ||| || ||| Sbjct 173448 CCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATC 173507 Query 16418 cattttttagcccaatttgctttttgtttAA-CACAGTTCATGTTCTCTATTGCATTAAA 16476 ||| | ||||||| | || |||| |||| ||| || | ||||| || || || Sbjct 173508 CATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAG-GAATAGTTTCTATAGCGTTTAA 173566 Query 16477 TAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTC 16536 ||| ||| ||||| || ||| || || || |||| || |||| ||| |||| Sbjct 173567 TAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTC 173626 Query 16537 TGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTG 16596 || ||||| || ||||| || || ||||| || || || ||||||| | ||||| Sbjct 173627 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 173686 Query 16597 TACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAA 16656 ||||||| | || |||| | |||||||| || || || ||||| ||| ||||| Sbjct 173687 AACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 173746 Query 16657 -AAACGCAAGTATGTGTTTAATAAAAtttttttCGTTATC--TGAAAGTTTTA-ACCAGT 16712 ||| |||| | | | ||| ||| | |||| || || | | | ||| ||| | Sbjct 173747 GAAAGCCAAGACTCT-TGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAAT 173805 Query 16713 CAGAAAAATCTTTTGATAAATCGACCTCTTCTACAGTCCAAAAAGAAGCAACAGCCTTTT 16772 | ||||| || || ||||||| ||||| | ||||| |||||||| | || | | Sbjct 173806 CGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCT 173865 Query 16773 TATACATTTTCCATATGTCT 16792 |||| || ||| || ||| Sbjct 173866 TATAGGCTTCCCAAATTTCT 173885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462511762962600