Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1 131 1e-25 >seq1 Length=1362551 Score = 131 bits (144), Expect = 1e-25 Identities = 536/841 (64%), Gaps = 27/841 (3%) Strand=Plus/Plus Query 19960 AATGGTGTACAAAAAACAGATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGC-- 20017 ||||||| | | | ||||| ||||||| || ||||| ||||| |||||| | | Sbjct 1128221 AATGGTGAAACCAGACCAGATAGAACCGGTACAGGAACTTTATCGATATTTGCACCACCA 1128280 Query 20018 -AATCTCGATATA-ACTTGA-GA-AATGAATTTCCCTTATTAACTACGAAACGGGTATTT 20073 ||| ||| | |||| | || || ||||||| |||||||| || ||| | |||||| Sbjct 1128281 CAATTAAGATTTTCACTTAAAGACAACAAATTTCCTTTATTAACAACAAAAAGAGTATTT 1128340 Query 20074 TGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAG 20133 |||| || | | ||| | | |||||| |||| ||| || ||| | | Sbjct 1128341 ACCAAAGCTATTATAGTAGAACTTCTTTGGTTTGTTAAGGGAGATACCAATAACAAAAAT 1128400 Query 20134 CTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGC 20193 || | || |||| || || |||||| | |||| ||| ||| || | Sbjct 1128401 CTACAAAAAGAAGGCGTCAAAATTTGGGATGGTAATGGTTCTCGTGAATACCTAGATTCT 1128460 Query 20194 AATGGATT---TGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGG 20250 ||| || ||||| | |||| || ||||| |||||||| ||||| || |||||| Sbjct 1128461 CTTGGGTTAACTGACA---GAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGG 1128517 Query 20251 AGACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGAT 20310 ||||||||||| |||||||||||||| |||| | || ||||| ||| Sbjct 1128518 AGACATTTTGGTGCTGAATATGTTGATTGTCACACTGACTACACAAACAAAGGATACGAT 1128577 Query 20311 CAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTA 20370 |||||| || | ||| || | || || || || |||| |||||||| || | Sbjct 1128578 CAATTAAGCGATATAATTCATAAGTTGAAGACCAATCCTTACGATAGAAGAATCATCATG 1128637 Query 20371 TGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC 20430 | || ||||| | ||| | ||||||| | || ||||| || | | || Sbjct 1128638 TCTGCTTGGAATCCACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGT 1128697 Query 20431 CAATTTTACGTTGCTAA---TAATGA------------ATTGTCGTGTCAAATGTATCAA 20475 ||||| || ||| || ||| || |||||| ||| | || ||| Sbjct 1128698 CAATTCTATGTTTCTTTCCCTAAAGACCAAAAGCCTCAATTGTCATGTATCTTATACCAA 1128757 Query 20476 CGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACG 20535 |||| ||||||||| |||||||||||||||| ||||| |||||| || | || Sbjct 1128758 AGATCTTGTGATATGGGGTTGGGTGTTCCTTTCAACATTGCTTCTTATGCTTTGTTGACC 1128817 Query 20536 TATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGAC 20595 ||||||||| | ||| ||| | | ||||| || | |||||||| || || Sbjct 1128818 AGAATGATTGCAAAGGTTGTTGATATGGATTGTGGTGAATTTATTCACACCATGGGTGAT 1128877 Query 20596 GCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAA 20655 || || ||||| ||||| |||| |||| ||| ||| | | || |||| | Sbjct 1128878 GCTCACGTTTACAAGGATCATGTAGATGCTTTGAAAGAACAAATTGAAAGAACTCCAAGA 1128937 Query 20656 CAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATATTAACGATTTTAAAGCTGAT 20715 ||||||| ||| | || | || | ||||||| ||| | ||||| || || Sbjct 1128938 GAATTCCCTACTTTAGAAATAAAAAGAGATATTAAAGACATTGATGATTTCAAGTTGGAA 1128997 Query 20716 GATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAA 20775 ||||||| | ||| || || || |||| || ||| ||| | ||| ||||||| Sbjct 1128998 GATTTTGAAATCAAAGACTACAACCCTTATAAGTCTATTAAGATGAAGATGAGTGTTTAA 1129057 Query 20776 T 20776 | Sbjct 1129058 T 1129058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183800532745