Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq1 131 1e-25
>seq1
Length=1362551
Score = 131 bits (144), Expect = 1e-25
Identities = 536/841 (64%), Gaps = 27/841 (3%)
Strand=Plus/Plus
Query 19960 AATGGTGTACAAAAAACAGATCGAACCGGAACTGGAACGTTATCTGTATTTGGAATGC-- 20017
||||||| | | | ||||| ||||||| || ||||| ||||| |||||| | |
Sbjct 1128221 AATGGTGAAACCAGACCAGATAGAACCGGTACAGGAACTTTATCGATATTTGCACCACCA 1128280
Query 20018 -AATCTCGATATA-ACTTGA-GA-AATGAATTTCCCTTATTAACTACGAAACGGGTATTT 20073
||| ||| | |||| | || || ||||||| |||||||| || ||| | ||||||
Sbjct 1128281 CAATTAAGATTTTCACTTAAAGACAACAAATTTCCTTTATTAACAACAAAAAGAGTATTT 1128340
Query 20074 TGGAAAGGCGTTGTTGAAGAGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAG 20133
|||| || | | ||| | | |||||| |||| ||| || ||| | |
Sbjct 1128341 ACCAAAGCTATTATAGTAGAACTTCTTTGGTTTGTTAAGGGAGATACCAATAACAAAAAT 1128400
Query 20134 CTTGTAGAAAAAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGC 20193
|| | || |||| || || |||||| | |||| ||| ||| || |
Sbjct 1128401 CTACAAAAAGAAGGCGTCAAAATTTGGGATGGTAATGGTTCTCGTGAATACCTAGATTCT 1128460
Query 20194 AATGGATT---TGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGG 20250
||| || ||||| | |||| || ||||| |||||||| ||||| || ||||||
Sbjct 1128461 CTTGGGTTAACTGACA---GAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGG 1128517
Query 20251 AGACATTTTGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGAT 20310
||||||||||| |||||||||||||| |||| | || ||||| |||
Sbjct 1128518 AGACATTTTGGTGCTGAATATGTTGATTGTCACACTGACTACACAAACAAAGGATACGAT 1128577
Query 20311 CAATTACAAAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTA 20370
|||||| || | ||| || | || || || || |||| |||||||| || |
Sbjct 1128578 CAATTAAGCGATATAATTCATAAGTTGAAGACCAATCCTTACGATAGAAGAATCATCATG 1128637
Query 20371 TGCGCCTGGAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC 20430
| || ||||| | ||| | ||||||| | || ||||| || | | ||
Sbjct 1128638 TCTGCTTGGAATCCACCAGACTTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTGT 1128697
Query 20431 CAATTTTACGTTGCTAA---TAATGA------------ATTGTCGTGTCAAATGTATCAA 20475
||||| || ||| || ||| || |||||| ||| | || |||
Sbjct 1128698 CAATTCTATGTTTCTTTCCCTAAAGACCAAAAGCCTCAATTGTCATGTATCTTATACCAA 1128757
Query 20476 CGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACG 20535
|||| ||||||||| |||||||||||||||| ||||| |||||| || | ||
Sbjct 1128758 AGATCTTGTGATATGGGGTTGGGTGTTCCTTTCAACATTGCTTCTTATGCTTTGTTGACC 1128817
Query 20536 TATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGAC 20595
||||||||| | ||| ||| | | ||||| || | |||||||| || ||
Sbjct 1128818 AGAATGATTGCAAAGGTTGTTGATATGGATTGTGGTGAATTTATTCACACCATGGGTGAT 1128877
Query 20596 GCGCATATTTACCTTAATCATATAGAACCTTTAAAATTACAGTTAACACGACAACCAAAA 20655
|| || ||||| ||||| |||| |||| ||| ||| | | || |||| |
Sbjct 1128878 GCTCACGTTTACAAGGATCATGTAGATGCTTTGAAAGAACAAATTGAAAGAACTCCAAGA 1128937
Query 20656 CAATTCCCAACTCTTCGCATTACTCGAACTGTTAAAGATATTAACGATTTTAAAGCTGAT 20715
||||||| ||| | || | || | ||||||| ||| | ||||| || ||
Sbjct 1128938 GAATTCCCTACTTTAGAAATAAAAAGAGATATTAAAGACATTGATGATTTCAAGTTGGAA 1128997
Query 20716 GATTTTGTGTTAGAAGGTTATAATCCCCATAATTCAATTCCAATGGAAATGTCTGTTTAA 20775
||||||| | ||| || || || |||| || ||| ||| | ||| |||||||
Sbjct 1128998 GATTTTGAAATCAAAGACTACAACCCTTATAAGTCTATTAAGATGAAGATGAGTGTTTAA 1129057
Query 20776 T 20776
|
Sbjct 1129058 T 1129058
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399183800532745
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |