Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq13 302 4e-77 >seq13 Length=415809 Score = 302 bits (334), Expect = 4e-77 Identities = 601/873 (69%), Gaps = 19/873 (2%) Strand=Plus/Plus Query 13900 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTC 13959 |||||| || |||||||| ||| |||||| ||||||||||| || || ||||| | Sbjct 173021 AATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 173080 Query 13960 CAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATA-AACACTTTATCACAAC 14018 | ||||| ||||||||||| || ||||| || || ||||| |||| || || || Sbjct 173081 TAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGT-GACATTGAACAGCTTTTCGTTAC 173139 Query 14019 CTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAAT 14078 ||| | | || ||||||||| |||| || |||| |||||| ||||| |||| || Sbjct 173140 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 173199 Query 14079 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 14138 ||||||| | || | || ||||| || || || ||||| || |||| Sbjct 173200 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 173259 Query 14139 CCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATT--TTAGATGTTTAAA 14196 | || ||||| | ||| || | || || | | || ||| || || Sbjct 173260 CTTCAGCAATAATTCTTTCAATGATCT--TTGGATCTGGTTTGTTCTTTAAGTGGGAGAA 173317 Query 14197 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 14256 | || ||| ||||| ||| ||| | || |||||||||| || | |||||| || || Sbjct 173318 CAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAA 173377 Query 14257 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 14316 || || || |||||||| || ||| || ||||| || || ||||| ||||| || || Sbjct 173378 AGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGA 173437 Query 14317 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14376 || || | || ||||| |||||||| || | | || ||| ||||| | || | || Sbjct 173438 GAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTT 173497 Query 14377 GT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435 | | || |||||| | |||||||||||| |||| ||||| | || ||||| | Sbjct 173498 ATCTTGA-ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTA 173556 Query 14436 TAGCATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATC-AATAAGTA 14492 |||| || ||||| || || || || | | |||| |||||||| || ||||| || Sbjct 173557 TAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTG--ATGTATGTGTCTAATAA-TA 173613 Query 14493 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAG 14552 | ||| |||||||||| ||||||||||| || || ||||| || ||||| ||| Sbjct 173614 AAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAG 173673 Query 14553 CTTCTGACCATTGTACCTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14611 |||||| ||| || || | || |||| |||| |||| |||||||| || |||||| Sbjct 173674 CTTCTGGAATTTGAACTTCAGCAGAGAAAT-TTTCAACCAAGTTTTCATTGACAATACCA 173732 Query 14612 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGCTG 14668 ||| ||| ||||| || ||||| | || ||| ||| | || | | |||||| | Sbjct 173733 TCAGAAGCAGCAAAGAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATT 173792 Query 14669 AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14728 || ||||||||| |||||||||||| | ||| | ||| ||| | ||||| ||| | Sbjct 173793 CTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAA 173852 Query 14729 GCAACAGCTTTTTTATACATTACCCATATTTCT 14761 || | ||| | ||||| | |||| |||||| Sbjct 173853 GCTTCGGCTCTCTTATAGGCTTCCCAAATTTCT 173885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345352797880