Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq13 302 4e-77
>seq13
Length=415809
Score = 302 bits (334), Expect = 4e-77
Identities = 601/873 (69%), Gaps = 19/873 (2%)
Strand=Plus/Plus
Query 13900 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTC 13959
|||||| || |||||||| ||| |||||| ||||||||||| || || ||||| |
Sbjct 173021 AATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 173080
Query 13960 CAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATA-AACACTTTATCACAAC 14018
| ||||| ||||||||||| || ||||| || || ||||| |||| || || ||
Sbjct 173081 TAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGT-GACATTGAACAGCTTTTCGTTAC 173139
Query 14019 CTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAAT 14078
||| | | || ||||||||| |||| || |||| |||||| ||||| |||| ||
Sbjct 173140 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 173199
Query 14079 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 14138
||||||| | || | || ||||| || || || ||||| || ||||
Sbjct 173200 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 173259
Query 14139 CCTCGTTTATAATAATCGTAATAATTTCATTAGAAGGAGGATATT--TTAGATGTTTAAA 14196
| || ||||| | ||| || | || || | | || ||| || ||
Sbjct 173260 CTTCAGCAATAATTCTTTCAATGATCT--TTGGATCTGGTTTGTTCTTTAAGTGGGAGAA 173317
Query 14197 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 14256
| || ||| ||||| ||| ||| | || |||||||||| || | |||||| || ||
Sbjct 173318 CAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAA 173377
Query 14257 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 14316
|| || || |||||||| || ||| || ||||| || || ||||| ||||| || ||
Sbjct 173378 AGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGA 173437
Query 14317 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14376
|| || | || ||||| |||||||| || | | || ||| ||||| | || | ||
Sbjct 173438 GAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTT 173497
Query 14377 GT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14435
| | || |||||| | |||||||||||| |||| ||||| | || ||||| |
Sbjct 173498 ATCTTGA-ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTA 173556
Query 14436 TAGCATTAAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATC-AATAAGTA 14492
|||| || ||||| || || || || | | |||| |||||||| || ||||| ||
Sbjct 173557 TAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTG--ATGTATGTGTCTAATAA-TA 173613
Query 14493 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAG 14552
| ||| |||||||||| ||||||||||| || || ||||| || ||||| |||
Sbjct 173614 AAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAG 173673
Query 14553 CTTCTGACCATTGTACCTCTG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14611
|||||| ||| || || | || |||| |||| |||| |||||||| || ||||||
Sbjct 173674 CTTCTGGAATTTGAACTTCAGCAGAGAAAT-TTTCAACCAAGTTTTCATTGACAATACCA 173732
Query 14612 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGCTG 14668
||| ||| ||||| || ||||| | || ||| ||| | || | | |||||| |
Sbjct 173733 TCAGAAGCAGCAAAGAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATT 173792
Query 14669 AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14728
|| ||||||||| |||||||||||| | ||| | ||| ||| | ||||| ||| |
Sbjct 173793 CTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAA 173852
Query 14729 GCAACAGCTTTTTTATACATTACCCATATTTCT 14761
|| | ||| | ||||| | |||| ||||||
Sbjct 173853 GCTTCGGCTCTCTTATAGGCTTCCCAAATTTCT 173885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482345352797880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |