Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq13 154 1e-32
seq4 147 2e-30
>seq13
Length=415809
Score = 154 bits (170), Expect = 1e-32
Identities = 403/611 (66%), Gaps = 13/611 (2%)
Strand=Plus/Minus
Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596
||||| || | || || ||| ||| ||||| |||||| | || || | || |||
Sbjct 173914 AGATTCGTTTTATTCCCAATTAAATTCCCAGAAATTTGGGAAGCCTATAAGAGAGCCGAA 173855
Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656
|| || || ||||||| |||||| | || ||||||||||| | ||||||| || |
Sbjct 173854 GCTTCTTTCTGGACCGCTGAAGAAATCGATTTGTCTAAGGATTTACACGATTGGAATAAC 173795
Query 57657 C---TCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCC 57713
| || ||| ||| ||| ||| ||| | || ||||| || || || || ||
Sbjct 173794 AGAATGAATGAAAATGAAAGATTTTTCATTTCAAGAGTCTTGGCTTTCTTTGCTGCTTCT 173735
Query 57714 GATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAG 57773
||||||||||| || || || ||||| |||| || || ||||| ||| | | ||
Sbjct 173734 GATGGTATTGTCAATGAAAACTTGGTTGAAAATTTCTCTGCTGAAGTTCAAATTCCAGAA 173675
Query 57774 GCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCG 57833
|| | || || ||||| || ||| | || |||||| | || || |||| |||||
Sbjct 173674 GCTAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCTGAAACTTATTCT 173615
Query 57834 CTACTCATCGATACGTACGTGAAGGA--CAACGACGAGAAACGTAGACTGTTCAACGCGA 57891
|| | | || || ||| | ||||| ||| | || || | | || ||||| |
Sbjct 173614 TTATTATTAGACACATACATCAAGGATCCAA--AGGAAAATGATTTCTTATTAAACGCTA 173557
Query 57892 TCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCG 57951
| ||||| || || | || | ||||| || ||| | || | |||||| || |
Sbjct 173556 TAGAAACTATTCCTGAAATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAA---G 173500
Query 57952 CCACGGCCAC---GTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCT 58008
| || | | ||| || || || || | || || || || || |||||| | || |
Sbjct 173499 ATAAGGACGCTTTGTTTGCTGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTTTT 173440
Query 58009 TTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGA 58068
| || || ||||| || || || ||| |||||||| || ||||||| || |||
Sbjct 173439 TCTCTGGTTCATTTGCTGCTATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTTGA 173380
Query 58069 CGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAA 58128
| || |||||| ||||| | | || || ||| | |||||||| ||||| || |||
Sbjct 173379 CTTTCTCCAACGAATTGATCTGTAGAGATGAAGGTTTACATACTGACTTTGCCTGTCTAT 173320
Query 58129 TGTACTCTCAC 58139
||| ||| |||
Sbjct 173319 TGTTCTCCCAC 173309
>seq4
Length=144043
Score = 147 bits (162), Expect = 2e-30
Identities = 335/504 (66%), Gaps = 0/504 (0%)
Strand=Plus/Minus
Query 23456 TGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACG 23515
||||| || || ||||| | ||||| || || ||||| || || || || ||||| |||
Sbjct 45838 TGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACG 45779
Query 23516 TAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCT 23575
|| | ||| ||||||||| | ||||| | ||| || | | ||| ||||| | ||
Sbjct 45778 TATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTG 45719
Query 23576 ACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCG 23635
|| || | || || | | || | |||||||| ||| ||||| || || |||
Sbjct 45718 GTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCG 45659
Query 23636 CCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCC 23695
| | || || || || |||| || | || || ||||| || || || ||
Sbjct 45658 GCAGTCTTAGAAATTTGAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCA 45599
Query 23696 TCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAAC 23755
|| || | | | |||||||| ||||||||||| | | | || ||| | || |||
Sbjct 45598 TCCTTCATAGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAAT 45539
Query 23756 AGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCG 23815
||||| || || || |||||||||| | ||||| | ||||| || |||||| |
Sbjct 45538 AGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACT 45479
Query 23816 GCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTC 23875
||||||| || ||||| ||||| | || || | ||| |||| | ||| |||||
Sbjct 45478 TTTTCAATGTTTTCACCGTGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTT 45419
Query 23876 TCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAA 23935
|| || | || || || || || | ||||| | || || || || || ||||||
Sbjct 45418 TCAACGATCTTACCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAA 45359
Query 23936 TAGTCATAGTTAAAGTCACGATCG 23959
|||| ||||| || || | ||||
Sbjct 45358 TAGTTGTAGTTGAAATCTCTATCG 45335
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445766171544720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |