Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq13 147 4e-30 seq1 98.7 2e-15 >seq13 Length=415809 Score = 147 bits (162), Expect = 4e-30 Identities = 497/755 (66%), Gaps = 38/755 (5%) Strand=Plus/Minus Query 101620 TTTCATTCTCCAGATTCT-GGCGTTCTTTGCATCCTCTGACGGAATTGTAATTGAAAATC 101678 ||||||| || ||| ||| ||| |||||||| | ||||| || ||||| | |||||| Sbjct 173771 TTTCATT-TCAAGAGTCTTGGCTTTCTTTGCTGCTTCTGATGGTATTGTCAATGAAAACT 173713 Query 101679 T--TACAACACGTCTTCG-TCAAGTGGCGCAGATTCCAGAAGCGAGGAGTTTCTTTGACT 101735 | | || | ||| | | |||| || ||||||||||| | | |||||| | | Sbjct 173712 TGGTTGAAAATTTCTCTGCTGAAGTT---CAAATTCCAGAAGCTAAGTGTTTCTACGGTT 173656 Query 101736 TCCAAGTTGGAATGGAGAGTATTCATG--GCAACGTCTACGGAGAACTGATTGATAGACT 101793 ||||| || ||||| | ||||| | ||| | | | | ||| ||||| Sbjct 173655 TCCAAATTATGATGGAAAACATTCACTCTGAAACTTATTCT------TTATTATTAGACA 173602 Query 101794 GGTGCC-CGACGA---AAAAGACAAGGCTATCTTGTTTAACGCTGCACAACACT-TCCCC 101848 | | | | || ||| || || | | |||| || |||||| | || ||| | || Sbjct 173601 CATACATCAAGGATCCAAAGGAAAATGATTTCTTATTAAACGCTATAGAA-ACTATTCCT 173543 Query 101849 GCCATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGATTTG--- 101905 | || ||| | |||| | |||||||||| ||||| ||| || ||| |||| Sbjct 173542 GAAATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAAGATAAGGACGCTTTGTTT 173483 Query 101906 GCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCA 101965 || ||| | | ||||| |||||||| |||||||| |||| || |||| |||| || Sbjct 173482 GCTGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTTTTTCTCTGGTTCATTTGCT 173423 Query 101966 TCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTC 102025 | || |||||| | ||||| | |||| | |||||||| | || | |||||| || || Sbjct 173422 GCTATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTTGACTTTCTCCAACGAATTG 173363 Query 102026 ATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTT 102085 || | ||| || |||||| | ||| |||||||| || | |||| | | Sbjct 173362 ATCTGTAGAGATGAAGGTTTACATACTGACTTTGCCTGTCTATTGTTCTCCCACT-TAAA 173304 Query 102086 GTTGATACCCCATCAAGAGAAAGGATTCTTGAAA---TTGTCACTGAAGCCGTCCGAATT 102142 | | ||| ||| | ||| | |||||| || | ||||||| || |||| Sbjct 173303 GAACAAACCAGATCCAAAGA-----TCATTGAAAGAATTATTGCTGAAGCTGTTGAAATT 173249 Query 102143 GAACAAGAATTTCTCACA-GTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGT- 102200 ||| |||| | || | | || | || ||| |||| | || ||||| ||| | Sbjct 173248 GAA-AAGAGATACTTTGTTGATGCCATTCCAGTTGCATTACTTGGTATGAA-TGCTGATC 173191 Query 102201 TGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAA 102260 | |||| ||| || |||||||||| || |||| | |||| |||| | || |||| Sbjct 173190 TAATGAACCAATATGTTGAATTTGTTGCTGATAGATTATTAGTTGCCTTAGGTAACGAAA 173131 Query 102261 AGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGA 102320 ||| | ||||| |||||||| ||| || ||||| || || ||| | | ||||| Sbjct 173130 AGCTGTTCAATGTCACCAACCCATTCGACTTTATGGAAAACATATCCTTAGCTGGTAAGA 173071 Query 102321 CCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 |||| || |||||||||||||| | || |||||| Sbjct 173070 CCAATTTCTTTGAAAAGAGAGTTTCTGATTATCAA 173036 >seq1 Length=1362551 Score = 98.7 bits (108), Expect = 2e-15 Identities = 313/475 (66%), Gaps = 13/475 (3%) Strand=Plus/Plus Query 35153 GATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCC---AAATGAGGTTCTCTCTT 35209 |||||||| || ||||||||| |||| || |||| ||| | || | || || || ||| Sbjct 1128239 GATAGAACCGGTACAGGAACTTTATCGATATTTGCACCACCACAATTAAGATTTTCACTT 1128298 Query 35210 CGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAA 35269 |||| ||| |||| | | || || || | | | || | || || | | | Sbjct 1128299 AAAGACAACAAATTTCCTTTATTAACAACAAAAAGAGTATTTACCAAAGCTATTATAGTA 1128358 Query 35270 GAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTGGCCAAGAAGAAGA-- 35327 ||||| ||||| | | ||| |||| | |||| | | ||| |||||| Sbjct 1128359 GAACTTCTTTGGTTTGTTAAGGGAGATACCAATAACAAAAATCTA--CAAAAAGAAGGCG 1128416 Query 35328 TACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATA 35387 | | || ||| | | |||||| || || |||| | || | |||||| || | Sbjct 1128417 TCAAAATTTGGGATGGTAATGGTTCTCGTGAATACCTAGATTCTCTTGGGTTAACTGACA 1128476 Query 35388 GAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAAT 35447 ||| ||| || ||||| || || || || || ||||||||| | |||||||||||||||| Sbjct 1128477 GAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTGGTGCTGAAT 1128536 Query 35448 ATGATACCTGTTCTTCCGATTATAC-TGGAAAGGGTATTGATCAATTGGCCAATATACTA 35506 ||| | ||| | || || || ||||| || |||||||| | ||||| | Sbjct 1128537 ATGTTGATTGTCACACTGACTACACAAACAAAGGATA-CGATCAATTAAGCGATATAATT 1128595 Query 35507 AAGACCCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTAT 35565 | | ||| ||| ||||| | |||||||| || || ||| | || |||||||| Sbjct 1128596 CATAAGTTGA-AGACCAATCCTTACGATAGAAGAATCATCATGTCTGCTTGGAATCCACC 1128654 Query 35566 GGATCTTCACCTTATGGCTCTTCCTCCATGCCAC-ATGACTGCTCAATTTTATGT 35619 || || | ||||||||||| ||||||||| | ||| |||||| ||||| Sbjct 1128655 AGACTTTAAGAAAATGGCTCTTCCGCCATGCCACGTTTTCTG-TCAATTCTATGT 1128708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583480159155