Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq4 419 3e-112 seq13 178 2e-39 >seq4 Length=144043 Score = 419 bits (464), Expect = 3e-112 Identities = 1485/2291 (65%), Gaps = 61/2291 (3%) Strand=Plus/Minus Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105 ||||||||||| | || || || | || || | | |||||||| || || || | | Sbjct 47191 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 47132 Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 62163 || ||||| ||||| || ||||| |||| || || | || | || | Sbjct 47131 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATGGTTGGGGCCATG--A 47074 Query 62164 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62223 |||| || ||||| || ||| |||||| ||||| ||| || || |||||||| | | Sbjct 47073 TATGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCAGCCATATCAA 47014 Query 62224 TGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62282 |||| |||||||||| | |||||||| ||||||||| || || ||| || |||| ||| Sbjct 47013 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 46955 Query 62283 AGGTTTGT--ATTCT-GAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 62339 | ||||| ||| | | || || ||| | | || || || ||| || | ||| Sbjct 46954 ATGTTTGGTAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 46895 Query 62340 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTC 62398 | ||| ||| | | || |||| | | | | | ||||| || | |||| |||| Sbjct 46894 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 46836 Query 62399 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62458 ||||| || ||| | || ||| || ||| || | ||||| | | ||||| | Sbjct 46835 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTA 46776 Query 62459 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62518 || |||||||| | ||| || ||||| |||||||| || |||||||| ||||| | Sbjct 46775 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 46716 Query 62519 ACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCA-AAGATCCGACGGTACAA 62577 ||||| | || ||| | || | | ||||| ||| ||| | | || ||| Sbjct 46715 ACCGTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCATAAGGTA-GTTGGAGCAA 46657 Query 62578 CANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCAT 62637 | ||||||| || ||| | | || || ||| | || | | ||| Sbjct 46656 CGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCAT 46597 Query 62638 ATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62697 | | |||||| | ||||||| || | || || || ||| ||| ||||||||||| Sbjct 46596 AGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTT 46537 Query 62698 CAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAA 62757 | || || | | || | || | |||| ||| |||||| |||| | | Sbjct 46536 CGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATCA 46477 Query 62758 TAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 62817 |||| | || || || ||||||||||| | | |||||||| |||||| | || || Sbjct 46476 TAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTGGATC 46417 Query 62818 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA-CA 62876 || ||| | || ||| ||||| || | || |||| || | | |||| | || Sbjct 46416 TTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCTTAGCA 46358 Query 62877 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA-------------------TCG 62917 || || || || || | ||||| || ||| | ||| Sbjct 46357 ATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCATAAGTTTGAGTCTTTTGATCTTCG 46298 Query 62918 CCCATCTATTACAAACA-TGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCAT 62976 | || ||||||| || | || |||||||| || | ||||| || || || | Sbjct 46297 GAGACCT-TTACAAAGGCTGGT-AAGGCAACAGAAGCTAAGTTACAAACAGCAGTTTCCT 46240 Query 62977 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAAT 63036 || |||| | |||| | || ||| || | ||| | | || || || || || | Sbjct 46239 TATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAAGT 46180 Query 63037 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 63096 | | ||||||| ||||| ||||| |||||||| |||| |||||| ||||||||||||| Sbjct 46179 TCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGTTT 46120 Query 63097 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC 63156 | | || | ||||| || || | ||| | | ||||||| || | ||| || | Sbjct 46119 CGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTC--TTTCTACC 46062 Query 63157 TC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63214 || | |||| ||||||| | ||| | ||| || || || || || ||| Sbjct 46061 TCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCATCACCATAAGCATCACT 46002 Query 63215 CAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63274 ||| | |||| |||| ||| | | || | ||| || || | |||| |||| || Sbjct 46001 CAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCTT 45942 Query 63275 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTT 63334 ||| || | ||||||||||| | |||| |||| |||||| | ||| ||| || || Sbjct 45941 CATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTT 45882 Query 63335 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63394 || ||| ||| | | |||| ||| | | |||||||| ||||| ||||| | ||| Sbjct 45881 ACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTA 45822 Query 63395 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63454 | || | | ||||| | |||||| || || ||||| | |||||| || ||||| || Sbjct 45821 CAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACGTATCTGGCAGTGTTGTT 45762 Query 63455 ATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCC 63514 ||||||| | ||| || || | ||| || || ||||||||||||| | || || Sbjct 45761 GAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGA 45702 Query 63515 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63574 ||| ||| | || || ||| || ||| || || || || | ||||| ||| Sbjct 45701 GCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTTAGAAATTTG 45642 Query 63575 TGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAG 63634 || ||| ||||| || |||||||| || || || |||||| |||| || || Sbjct 45641 AGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTAA 45582 Query 63635 AAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63694 ||||| ||||||||| | | | ||| || ||||| |||| || |||||||| || Sbjct 45581 GAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCATG 45522 Query 63695 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCCCATT 63753 ||||| || ||| ||| | | ||||| || || || || || || | || Sbjct 45521 GGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTCACC 45462 Query 63754 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGT 63813 | || || || || || || | ||| | || || || ||||||||||| || || | Sbjct 45461 G-TGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTTACCAT 45403 Query 63814 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAA 63871 | || ||||| ||||| ||| ||||||| || || ||||||||||||||||| ||||| Sbjct 45402 TGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAAA- 45344 Query 63872 GTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCAT 63931 |||| ||| | |||||| | || | |||| || | ||| |||| | | | Sbjct 45343 -TCTCTATCGAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTT---T 45288 Query 63932 GGTAATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 63988 | || | | | ||||| || ||||| |||||| | ||||| |||||| | Sbjct 45287 GTAAACATCATCAGAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAGTTGTA 45228 Query 63989 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGC 64048 ||| || || || |||| | ||||| |||||| |||| |||||||| || ||||| Sbjct 45227 TAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGATGGC 45168 Query 64049 TATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 64107 ||||||||||| |||| |||||||| ||||| || || || || ||| ||| Sbjct 45167 GATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCACAAGTTT 45109 Query 64108 CGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCT 64167 | || || | | || ||||| | || || || || | || | || |||| | Sbjct 45108 CAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAGATAA--T 45051 Query 64168 TCAT--AGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTCT 64225 || | | ||||| | |||||| ||||| | | | ||| |||||||| ||| | Sbjct 45050 TCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATAATCTAGC 44991 Query 64226 AATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGTTTAATGA 64284 ||| | || || ||||||||||| ||| | ||| | ||| | || ||||| | Sbjct 44990 AATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTTTTAACAA 44932 Query 64285 CAAACATTTTT 64295 ||||||| ||| Sbjct 44931 CAAACATGTTT 44921 >seq13 Length=415809 Score = 178 bits (196), Expect = 2e-39 Identities = 573/883 (65%), Gaps = 10/883 (1%) Strand=Plus/Plus Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350 ||||| || ||| || | ||||| || ||||| || || || | || ||||| ||| Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093 Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410 ||||| || || || || ||||| |||||| | | |||| || || || | Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 173153 Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470 |||||||| || || ||||| | |||| ||||| | ||| |||||| || | | | Sbjct 173154 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 173213 Query 33471 TTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATGGATACCGCATTTGTTATAAT 33529 |||||||| || || || || |||| |||||| || || | | ||||| Sbjct 173214 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 173272 Query 33530 AAATCTAACGGTTTCTTCA-CTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGA 33588 | || | | | | | || | | | | | ||| || |||| | ||| || | Sbjct 173273 TCTTTCAATGATCTTTGGATCTGGTTTGTTCTT-TAAGTGGGAGAACAATAGACAGGCAA 173331 Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648 | || || | ||| || ||||||| || |||||||| || || || | || |||| Sbjct 173332 AGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCA 173391 Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708 | | || || || | ||| || || | ||| ||||| || || || |||| |||| Sbjct 173392 TCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTT 173451 Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 33765 | || |||||||| |||| ||||| || || | | || | | || || ||||| Sbjct 173452 CAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATC 173511 Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825 | |||||| || ||||| | || | ||| || |||||||| || || || | Sbjct 173512 TAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAAGA 173571 Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885 | | ||||| || ||| || | || || || | || | | ||| |||| || | Sbjct 173572 AATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGAGT 173631 Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945 |||||||||| || || || || ||||||||||| |||| || | ||| || |||| Sbjct 173632 GAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAACTT 173691 Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005 | | | | || ||| | || |||||||| || || |||||| || ||||| || | Sbjct 173692 CAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAAAG 173751 Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGA 34062 |||| || | || ||| || |||| | | | | | ||||||||||| | | Sbjct 173752 CCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTGTA 173811 Query 34063 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 34122 ||| ||||| | ||| | |||||| | ||||| || || || || || | ||||| Sbjct 173812 AATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATAGG 173871 Query 34123 TATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 | ||| || || | ||| |||||||| | ||| ||||| Sbjct 173872 CTTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCT 173914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817277218480