Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq4 419 3e-112
seq13 178 2e-39
>seq4
Length=144043
Score = 419 bits (464), Expect = 3e-112
Identities = 1485/2291 (65%), Gaps = 61/2291 (3%)
Strand=Plus/Minus
Query 62046 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62105
||||||||||| | || || || | || || | | |||||||| || || || | |
Sbjct 47191 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 47132
Query 62106 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 62163
|| ||||| ||||| || ||||| |||| || || | || | || |
Sbjct 47131 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATGGTTGGGGCCATG--A 47074
Query 62164 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62223
|||| || ||||| || ||| |||||| ||||| ||| || || |||||||| | |
Sbjct 47073 TATGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCAGCCATATCAA 47014
Query 62224 TGATCGTCTTTTGTGCAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62282
|||| |||||||||| | |||||||| ||||||||| || || ||| || |||| |||
Sbjct 47013 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 46955
Query 62283 AGGTTTGT--ATTCT-GAATGGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 62339
| ||||| ||| | | || || ||| | | || || || ||| || | |||
Sbjct 46954 ATGTTTGGTAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 46895
Query 62340 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGGTTAACTACTTGGAATTC 62398
| ||| ||| | | || |||| | | | | | ||||| || | |||| ||||
Sbjct 46894 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 46836
Query 62399 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62458
||||| || ||| | || ||| || ||| || | ||||| | | ||||| |
Sbjct 46835 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTA 46776
Query 62459 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62518
|| |||||||| | ||| || ||||| |||||||| || |||||||| ||||| |
Sbjct 46775 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 46716
Query 62519 ACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCA-AAGATCCGACGGTACAA 62577
||||| | || ||| | || | | ||||| ||| ||| | | || |||
Sbjct 46715 ACCGTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCATAAGGTA-GTTGGAGCAA 46657
Query 62578 CANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTATCAT 62637
| ||||||| || ||| | | || || ||| | || | | |||
Sbjct 46656 CGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCAT 46597
Query 62638 ATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGTAATAAATGGTTT 62697
| | |||||| | ||||||| || | || || || ||| ||| |||||||||||
Sbjct 46596 AGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTT 46537
Query 62698 CAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAA 62757
| || || | | || | || | |||| ||| |||||| |||| | |
Sbjct 46536 CGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATCA 46477
Query 62758 TAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGA 62817
|||| | || || || ||||||||||| | | |||||||| |||||| | || ||
Sbjct 46476 TAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTTGGATC 46417
Query 62818 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA-CA 62876
|| ||| | || ||| ||||| || | || |||| || | | |||| | ||
Sbjct 46416 TTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCTTAGCA 46358
Query 62877 ATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA-------------------TCG 62917
|| || || || || | ||||| || ||| | |||
Sbjct 46357 ATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCATAAGTTTGAGTCTTTTGATCTTCG 46298
Query 62918 CCCATCTATTACAAACA-TGTTCAATGCAACAGATGCCAGATTACACACGGCTACCTCAT 62976
| || ||||||| || | || |||||||| || | ||||| || || || |
Sbjct 46297 GAGACCT-TTACAAAGGCTGGT-AAGGCAACAGAAGCTAAGTTACAAACAGCAGTTTCCT 46240
Query 62977 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAAT 63036
|| |||| | |||| | || ||| || | ||| | | || || || || || |
Sbjct 46239 TATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAAGT 46180
Query 63037 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 63096
| | ||||||| ||||| ||||| |||||||| |||| |||||| |||||||||||||
Sbjct 46179 TCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGTTT 46120
Query 63097 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC 63156
| | || | ||||| || || | ||| | | ||||||| || | ||| || |
Sbjct 46119 CGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTC--TTTCTACC 46062
Query 63157 TC--CTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63214
|| | |||| ||||||| | ||| | ||| || || || || || |||
Sbjct 46061 TCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCATCACCATAAGCATCACT 46002
Query 63215 CAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63274
||| | |||| |||| ||| | | || | ||| || || | |||| |||| ||
Sbjct 46001 CAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCTT 45942
Query 63275 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTCCTCGTT 63334
||| || | ||||||||||| | |||| |||| |||||| | ||| ||| || ||
Sbjct 45941 CATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTT 45882
Query 63335 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63394
|| ||| ||| | | |||| ||| | | |||||||| ||||| ||||| | |||
Sbjct 45881 ACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTA 45822
Query 63395 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63454
| || | | ||||| | |||||| || || ||||| | |||||| || ||||| ||
Sbjct 45821 CAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACGTATCTGGCAGTGTTGTT 45762
Query 63455 ATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCC 63514
||||||| | ||| || || | ||| || || ||||||||||||| | || ||
Sbjct 45761 GAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGA 45702
Query 63515 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63574
||| ||| | || || ||| || ||| || || || || | ||||| |||
Sbjct 45701 GCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTTAGAAATTTG 45642
Query 63575 TGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAG 63634
|| ||| ||||| || |||||||| || || || |||||| |||| || ||
Sbjct 45641 AGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTAA 45582
Query 63635 AAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63694
||||| ||||||||| | | | ||| || ||||| |||| || |||||||| ||
Sbjct 45581 GAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCATG 45522
Query 63695 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCCCATT 63753
||||| || ||| ||| | | ||||| || || || || || || | ||
Sbjct 45521 GGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTCACC 45462
Query 63754 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATTTTGTTGT 63813
| || || || || || || | ||| | || || || ||||||||||| || || |
Sbjct 45461 G-TGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTTACCAT 45403
Query 63814 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAA 63871
| || ||||| ||||| ||| ||||||| || || ||||||||||||||||| |||||
Sbjct 45402 TGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAAA- 45344
Query 63872 GTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATATCCAT 63931
|||| ||| | |||||| | || | |||| || | ||| |||| | | |
Sbjct 45343 -TCTCTATCGAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTT---T 45288
Query 63932 GGTAATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAA 63988
| || | | | ||||| || ||||| |||||| | ||||| |||||| |
Sbjct 45287 GTAAACATCATCAGAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAGTTGTA 45228
Query 63989 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATATGGC 64048
||| || || || |||| | ||||| |||||| |||| |||||||| || |||||
Sbjct 45227 TAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGATGGC 45168
Query 64049 TATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 64107
||||||||||| |||| |||||||| ||||| || || || || ||| |||
Sbjct 45167 GATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCACAAGTTT 45109
Query 64108 CGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCT 64167
| || || | | || ||||| | || || || || | || | || |||| |
Sbjct 45108 CAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAGATAA--T 45051
Query 64168 TCAT--AGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTCT 64225
|| | | ||||| | |||||| ||||| | | | ||| |||||||| ||| |
Sbjct 45050 TCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATAATCTAGC 44991
Query 64226 AATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGTTTAATGA 64284
||| | || || ||||||||||| ||| | ||| | ||| | || ||||| |
Sbjct 44990 AATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTTTTAACAA 44932
Query 64285 CAAACATTTTT 64295
||||||| |||
Sbjct 44931 CAAACATGTTT 44921
>seq13
Length=415809
Score = 178 bits (196), Expect = 2e-39
Identities = 573/883 (65%), Gaps = 10/883 (1%)
Strand=Plus/Plus
Query 33291 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33350
||||| || ||| || | ||||| || ||||| || || || | || ||||| |||
Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093
Query 33351 TCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATCCCAATTCAGAAATC 33410
||||| || || || || ||||| |||||| | | |||| || || || |
Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 173153
Query 33411 AATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATGAGT 33470
|||||||| || || ||||| | |||| ||||| | ||| |||||| || | | |
Sbjct 173154 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 173213
Query 33471 TTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATGGATACCGCATTTGTTATAAT 33529
|||||||| || || || || |||| |||||| || || | | |||||
Sbjct 173214 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 173272
Query 33530 AAATCTAACGGTTTCTTCA-CTCGGTGGATGTAATAAATGTTTAAACATCAAACATGCGA 33588
| || | | | | | || | | | | | ||| || |||| | ||| || |
Sbjct 173273 TCTTTCAATGATCTTTGGATCTGGTTTGTTCTT-TAAGTGGGAGAACAATAGACAGGCAA 173331
Query 33589 AATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCA 33648
| || || | ||| || ||||||| || |||||||| || || || | || ||||
Sbjct 173332 AGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCA 173391
Query 33649 TTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTT 33708
| | || || || | ||| || || | ||| ||||| || || || |||| ||||
Sbjct 173392 TCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTT 173451
Query 33709 CTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACT 33765
| || |||||||| |||| ||||| || || | | || | | || || |||||
Sbjct 173452 CAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATC 173511
Query 33766 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGAT 33825
| |||||| || ||||| | || | ||| || |||||||| || || || |
Sbjct 173512 TAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAAGA 173571
Query 33826 AGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAAT 33885
| | ||||| || ||| || | || || || | || | | ||| |||| || |
Sbjct 173572 AATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGAGT 173631
Query 33886 GAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTT 33945
|||||||||| || || || || ||||||||||| |||| || | ||| || ||||
Sbjct 173632 GAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAACTT 173691
Query 33946 CTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACG 34005
| | | | || ||| | || |||||||| || || |||||| || ||||| || |
Sbjct 173692 CAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAAAG 173751
Query 34006 CCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGA 34062
|||| || | || ||| || |||| | | | | | ||||||||||| | |
Sbjct 173752 CCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTGTA 173811
Query 34063 TATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACA 34122
||| ||||| | ||| | |||||| | ||||| || || || || || | |||||
Sbjct 173812 AATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATAGG 173871
Query 34123 TATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165
| ||| || || | ||| |||||||| | ||| |||||
Sbjct 173872 CTTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCT 173914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817277218480
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