Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq4 347 1e-90
seq13 255 5e-63
>seq4
Length=144043
Score = 347 bits (384), Expect = 1e-90
Identities = 1215/1877 (65%), Gaps = 61/1877 (3%)
Strand=Plus/Minus
Query 36796 GTGAATTTTATAGGATTTGATGCCGATTTTGTTCTCATATAATACATTCCAGTTTTTAGC 36855
||||||| |||| ||| || | || |||||||| || ||||| ||||| || |
Sbjct 47191 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 47132
Query 36856 CCCAATCTCCATCCGTAAAAATGCATACTGGTCAGTT---TTGCGTATG--TAGGATTAT 36910
||| ||||| ||||| || ||||| | |||| || | ||| | || ||
Sbjct 47131 CCCTTGCTCCAACCGTAGAAGTGCAT----GGAAGTTAACTTACCCATGGTTGGGGCCAT 47076
Query 36911 CTATATATATTGTCATTGATTGACTTTGATCTATAAACGCACCTCTGTCGGCTGCCATTT 36970
|||| || |||| || ||| |||||| || || || ||| || || ||||| |
Sbjct 47075 G-ATATGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCAGCCATAT 47017
Query 36971 CTAAAATACATTTTTGAGATATCTCCCAAACCGTTTTATATATTTGTTTTATATTATCTG 37030
| | ||| ||||| |||| |||||||| |||||||| | | || || | | |
Sbjct 47016 CAATGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATCCTTCATTTCTTGAG 46957
Query 37031 GTAAATCT---AAATGTTGAATAGAACCATTATGTAACACAATTGTATT---CTTTATGT 37084
| | | | || ||||| ||||||||||| | || || || |||| ||| |||
Sbjct 46956 GAATGTTTGGTAATTGTTGGATAGAACCATTGT-TAGCA--ATGATATTAGACTTCATGG 46900
Query 37085 CATTATTCCACATATTTCTACTTATTAGTTCTCTCAATAGGTGTGGATTTACAACCTGAA 37144
| | || ||| ||| || | || || |||||| || ||| || |||| ||
Sbjct 46899 CTTCATCCCAAATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGT 46840
Query 37145 AATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATGGACTCAT 37204
| || |||||||| |||||| | || || || ||| ||||||||| | ||||
Sbjct 46839 ATTCACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCAT 46780
Query 37205 TATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGGCTATTTC 37264
| | || ||| ||||| || ||||| ||||| ||||| || || | | | | ||||
Sbjct 46779 TGTAACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTC 46720
Query 37265 TCAATCCATGTGTATTAATTCTCTTTTTTAGTTCATTCCAATCCCATAAATCTGTTGGGT 37324
| || || || | ||| | || | |||| ||||||||||||| |||||
Sbjct 46719 TTAAACCGTGCTTGGCAATCTTAGCCTTCAATTCAGTCCAATCCCATAAGGTAGTTGGAG 46660
Query 37325 T--CTTTAACCACATATCATATTGTAGAATACCTTTACTCGCTGGAGAATCGTTATATGT 37382
| || ||| | ||| ||||||| || ||||| | ||||||||| | | || |
Sbjct 46659 CAACGTT--CCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGA 46602
Query 37383 CTCATAAGGTCCGTAAATTTTAGCTAGTTCGCAACTAGATTCTAGTGCGGCATAATATAT 37442
|||| | ||| | ||||| ||||| ||| || ||| | || || | ||| ||
Sbjct 46601 AGCATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAAT 46542
Query 37443 TGTTTCGAAAATTTGTATATTTAATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAA 37502
|||||||||||||| || || ||| || |||| ||| |||||||| | | ||
Sbjct 46541 GGTTTCGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGAATCGAATGGAACTCTTAA 46482
Query 37503 TAATATAAACACATCAGCCAAACCCTGAACACCGATACCTATGGGTCTATGTTTCTTATT 37562
| ||||| |||||||||||| |||||||| | | || ||||| ||| || | ||
Sbjct 46481 CATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTT 46422
Query 37563 AGATCT---AGACGATTCTATCACTGGATAATAATTGATATCTATTATTTTATTTAGATT 37619
||||| || | ||| | | || ||||| || | || || | |||| ||
Sbjct 46421 GGATCTTCTAGCAGTTTCAA---CAGGGTAATAGTTTCTGTCAATAACAGCGTTTAAGTT 46365
Query 37620 TTTAACTAGTATTTTCGTAATTATTCTCAACTTGTC-GAA--CATAAATACGT-TATTAT 37675
||| | | | || || | | | || || | ||| ||||| | | | || |
Sbjct 46364 CTTAGCAATAACCTTACAAACT-TCGTGAAGTTTTTTGAAGTCATAAGTTTGAGTCTTTT 46306
Query 37676 TAAC-------AAATTTACTCA--------ACGAAATAGATCCTAGATTACATACAGCAA 37720
| | | ||||| | | | || ||| ||| ||||| ||||||
Sbjct 46305 GATCTTCGGAGACCTTTACAAAGGCTGGTAAGGCAACAGAAGCTAAGTTACAAACAGCAG 46246
Query 37721 CTTCATCTTCGTTACTAA--ATTGTATAATCTCTGTACAGAGATTACTCGATCTAATTGT 37778
||| | || | || | ||| | ||| || ||| | ||| ||| |||||||
Sbjct 46245 TTTCCTTATCAT--CTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGT 46188
Query 37779 TCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATCTTTATATAGTATATACGGCGT 37838
||||| || ||||||| |||||||||||||||| ||| || || | || | || ||
Sbjct 46187 ACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGT 46128
Query 37839 TCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAAACTTCTTGCTTTAACGATCGC 37898
|| ||| |||| || || | || | | |||||| || || || | | ||
Sbjct 46127 ACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTCTT 46068
Query 37899 TTTAAtttttttCTTTGTTTCGTATTCTATATATAATTTGTTAAAATCATTCCCCCATA- 37957
| || | | | | |||||||| ||||| || | ||| |||| | |||||
Sbjct 46067 TCTACCTCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCAT--CACCATAA 46010
Query 37958 -CATCGCATAATCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCT 38016
|||| | || || ||| ||| | ||| | | || || ||| || ||| | |
Sbjct 46009 GCATCACTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTG 45950
Query 38017 ACGCGTTCCATAAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATAT 38076
|| | | ||| || || ||||| | |||||| || | ||||||||| | | ||| |
Sbjct 45949 ACTCTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATT 45890
Query 38077 TCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGT 38136
||||| || || ||| ||||| | | | ||||| || ||||||| ||||||||||
Sbjct 45889 TCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGT 45830
Query 38137 TCTATATAAATCGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACT 38196
|||| || | | | || || |||||||| | ||| || |||| || ||||| |
Sbjct 45829 TCTAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACGTATCTGGCA 45770
Query 38197 GTGTTATTATATATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGAT 38256
||||| || | | ||| | |||||||| | |||||| || | || || |||| |
Sbjct 45769 GTGTTGTTGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGCA 45710
Query 38257 ATATAAGTACCCTTAGCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTT 38316
|| |||| || | | || || || || || || || ||||| ||| ||
Sbjct 45709 ATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTTA 45650
Query 38317 GATATTAAAGCGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATT 38376
|| ||| ||| |||| ||||| |||||| | ||||| || ||| |||||||| ||
Sbjct 45649 GAAATTTGAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATA 45590
Query 38377 GGTAGTATAAAACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGA 38436
| | || |||||| |||||||||||| |||||| || || || |||| ||| |||
Sbjct 45589 GAAATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGA 45530
Query 38437 GATGCATGTATGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATA 38496
|| ||||| | || || ||| |||| | || || ||||| || || | || ||
Sbjct 45529 GAAGCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATG 45470
Query 38497 TCACCGCCGTGAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTATTATT 38556
| | ||||| ||||| | || || ||||| | || ||||||||||||||| | ||
Sbjct 45469 TTTTCACCGTGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAACGATC 45410
Query 38557 TTATTATTCTGTTTAAGTAGATACGATTTTTCTAATGTTTTTATTCCAAAATAACTATA- 38615
||| ||| || | || || ||| |||| ||||| || | |||||||| | ||
Sbjct 45409 TTACCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAG 45350
Query 38616 -TGAATAATCTCTATCG 38631
|||| ||||||||||
Sbjct 45349 TTGAA--ATCTCTATCG 45335
>seq13
Length=415809
Score = 255 bits (282), Expect = 5e-63
Identities = 600/894 (67%), Gaps = 30/894 (3%)
Strand=Plus/Plus
Query 11338 CTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATA 11397
||||||||| ||| ||||| ||| || ||||| |||||||| ||| ||||| |
Sbjct 173033 CTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTT 173092
Query 11398 CTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAA 11457
||||||||| || || || |||||||| | ||||| |||||| | |||
Sbjct 173093 TTCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAA 173152
Query 11458 TAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAG 11517
||||||||| || || ||||| | ||| || ||||| | | ||||||||| | |
Sbjct 173153 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAA 173212
Query 11518 ATCCACCGGAATAGCAACTGTCAAAAACTC-CTTTTCTATATTAACCGCATCAATGATTA 11576
| || ||||| ||| | |||| || |||||| || | ||| || ||| || |
Sbjct 173213 TGCAACTGGAATGGCATCAA-CAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAATAA 173271
Query 11577 TCGACGTTATAACTTCCTTAGATGGTGGATGTAAT--AAATGTTTAAACATTAAACACGC 11634
| | || | || || ||| | ||| | || || |||| || ||| ||
Sbjct 173272 TT--CTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAGTGGGAGAACAATAGACAGGC 173329
Query 11635 AAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGG 11694
||| ||| |||||||||||| ||||||| || | ||| || || || || || || ||
Sbjct 173330 AAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGG 173389
Query 11695 CATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCC 11754
|||||| || ||| || | ||| || |||||||||||||||||||| || || | ||
Sbjct 173390 CATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACC 173449
Query 11755 CTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATA------CCTTGTTGCTAGATAT 11808
|| ||||| ||||| || || | |||||| || | | |||| | || || ||
Sbjct 173450 TTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTAT--CTTGA-AT 173506
Query 11809 CCATTTTCTGGCCCAATCAGC--TTTCTTT--TTTACGCATTCCATTGTTTCTATAGCGT 11864
|||| | | ||||| ||||| |||| || ||| | | || |||||||||||||
Sbjct 173507 CCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGA----ATAGTTTCTATAGCGT 173562
Query 11865 TAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATA 11922
| |||| || || ||||| | ||| | | ||||| |||| ||||||| |||
Sbjct 173563 TTAATAAGAAATCA--TTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATA 173620
Query 11923 CATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGA 11982
|||| || ||||| |||||||| ||||| || || |||||||| || ||||
Sbjct 173621 AGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGG 173680
Query 11983 ACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGA 12042
| || || || || | || |||| | || || ||||| |||||||||||| ||
Sbjct 173681 AATTTGAACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGC 173740
Query 12043 TGCAAAAAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAAT---TTATC 12099
||||| || || | | | || || || |||| | || | | | | ||||
Sbjct 173741 AGCAAAGAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATT 173800
Query 12100 CCAATCATCTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGA 12159
|||||| | |||||| || || ||||| | ||||||| ||||||| ||| || | |
Sbjct 173801 CCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGC 173860
Query 12160 TTGTTTATACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCT 12213
| ||||| || ||| || || | | ||||| ||||| | |||||| ||
Sbjct 173861 TCTCTTATAGGCTTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCT 173914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468524559881040
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