Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq4 435 4e-117 seq13 214 2e-50 >seq4 Length=144043 Score = 435 bits (482), Expect = 4e-117 Identities = 1495/2297 (65%), Gaps = 73/2297 (3%) Strand=Plus/Minus Query 64839 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 64898 ||||||||||| | || || || | || || | | |||||||| || || || | | Sbjct 47191 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 47132 Query 64899 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 64956 || ||||| ||||| || ||||| |||| || || | || | || | Sbjct 47131 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATGGTTGGGGCCATG--A 47074 Query 64957 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 65016 |||| || ||||| || ||| |||||| ||||| ||| || || |||||||| | | Sbjct 47073 TATGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCAGCCATATCAA 47014 Query 65017 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 65075 |||| |||||||||| | |||||||| ||||||||| || || ||| || |||| ||| Sbjct 47013 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 46955 Query 65076 AGGTTTGT--ATTCT-GAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 65132 | ||||| ||| | | || || ||| | || || || || ||| || | ||| Sbjct 46954 ATGTTTGGTAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 46895 Query 65133 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 65191 | ||| ||| | | || |||| | | | | | || || || | ||| |||| Sbjct 46894 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 46836 Query 65192 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 65251 ||||| || ||| | || ||| || ||| || | ||||| | | | ||||| | Sbjct 46835 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTA 46776 Query 65252 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 65311 || |||||||| | ||| || ||||| |||||||| || |||||||| ||||| | Sbjct 46775 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 46716 Query 65312 ACCGTATGTTCTGATTTTATCTTTTAGAGGTTC---CCAATTCCA-AAGATCCGACGGTA 65367 ||||| | || ||| | || | ||| ||||| ||| ||| | | || Sbjct 46715 ACCGTGCTTGGCAATCTTAGCCTTCAA---TTCAGTCCAATCCCATAAGGTA-GTTGGAG 46660 Query 65368 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 65427 |||| ||||| || ||| | | || || ||| | || | | Sbjct 46659 CAACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAG 46600 Query 65428 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 65487 | || | |||||| | ||||||| |||| || || || ||| ||| |||||||| Sbjct 46599 CATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGG 46540 Query 65488 TTTCGAAGATCTTCTTATTTAGATCTTGTGCTTC--CAGGCTATCAAATGGATAATTTAA 65545 ||||||| || | | || | || | |||| ||| ||| |||||| |||| Sbjct 46539 TTTCGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGA--ATCGAATGGAACTCTTAA 46482 Query 65546 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 65605 | ||||| | || || || ||||||||||| | | |||||||| |||||| | || Sbjct 46481 CATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTT 46422 Query 65606 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 65665 || || ||| | || ||| ||||| || | || |||| || | | |||| Sbjct 46421 GGATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCT 46363 Query 65666 GA-CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA------------TCGCT 65712 | |||| || || || || | ||||| || ||| | | | | Sbjct 46362 TAGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCATAAGTTTGAGTCTTTTGAT 46303 Query 65713 CATCTA------TTACAAACA-TGTTCAATGCAACAGATGCCAGATTACAAACGGCTACC 65765 | || ||||||| || | || |||||||| || | |||||||| || Sbjct 46302 CTTCGGAGACCTTTACAAAGGCTGGT-AAGGCAACAGAAGCTAAGTTACAAACAGCAGTT 46244 Query 65766 TCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCT 65825 || ||| |||| | |||| | || ||| || | ||| | | || || || || Sbjct 46243 TCCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCC 46184 Query 65826 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCA 65885 || || | ||||||| ||||| ||||| |||||||| |||| |||||| ||||||||| Sbjct 46183 AAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCA 46124 Query 65886 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTG 65945 ||||| | || | ||||| || || | ||| | | ||||||| || | ||| Sbjct 46123 GTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTC--TTTC 46066 Query 65946 TATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACAT 66003 || |||| |||| ||||||| | ||| | ||| || || || || || ||| Sbjct 46065 TACCTCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCATCACCATAAGCAT 46006 Query 66004 TGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTC 66063 ||| |||||| |||| ||| | | || | ||| || || | |||| |||| Sbjct 46005 CACTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTC 45946 Query 66064 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCT 66123 ||||| || | ||||||||||| | |||| ||||||||||| | ||| ||| | Sbjct 45945 TCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTT 45886 Query 66124 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCA 66183 | || || ||| ||| | | |||| ||| | | |||||| | ||||| ||||| | Sbjct 45885 CCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTA 45826 Query 66184 AGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 66243 ||| | || | | ||||| | |||||| || || ||||| | |||||| || |||| Sbjct 45825 GGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACGTATCTGGCAGTGT 45766 Query 66244 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATAT 66303 | || ||||||| | ||| || || | ||||||||| ||||||||||| || | || | Sbjct 45765 TGTTGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGCAATGT 45706 Query 66304 AGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 66363 | ||| | | | || || ||| || ||| || || || || | ||||| | Sbjct 45705 AAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTTAGAAA 45646 Query 66364 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 66423 || || ||| ||||| ||||||||||| || || ||| ||||||| |||| || Sbjct 45645 TTTGAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAA 45586 Query 66424 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 66483 || ||||| ||||||||| | | ||| || ||||| |||| || ||||||| Sbjct 45585 TTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAG 45526 Query 66484 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATCC 66542 | || ||||| || ||| ||| | | ||||| || || || || || || | Sbjct 45525 CATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTT 45466 Query 66543 CATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 66602 || | || || || || || || | ||| | || || || ||||||||||||||||| Sbjct 45465 CACCG-TGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTTA 45407 Query 66603 TTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 66660 || || ||||| ||||| ||| ||||||| || || ||||||||||||||||| || Sbjct 45406 CCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTG 45347 Query 66661 AAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 66720 ||| |||| ||| | |||||| | | | |||| || | ||| |||| | Sbjct 45346 AAA--TCTCTATCGAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTT 45289 Query 66721 CCATGGTAATA-CTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGT 66777 || || | | | ||||| || ||||| |||||| | || || |||| Sbjct 45288 ---TGTAAACATCATCAGAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAGT 45232 Query 66778 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TGA 66835 || |||| || || || |||| | ||||| |||||| |||| ||||||| || ||| Sbjct 45231 TGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGA 45172 Query 66836 TACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTG 66894 | ||| ||||| ||||| | || |||||||| ||||| || || || || ||| Sbjct 45171 T--GGCGATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCAC 45115 Query 66895 CTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGA 66954 |||| || || | | || ||||| | || || || || | || | || || Sbjct 45114 AAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAGA 45055 Query 66955 TAACCTTCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAA 67012 ||| ||| | | ||||| | |||||| ||||| | || | ||| ||||| ||||| Sbjct 45054 TAA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATAA 44997 Query 67013 TTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGTT 67071 | | ||| | ||||| ||||||||||| ||| | ||| | ||| | || || Sbjct 44996 TCTAGCAATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTTT 44938 Query 67072 TAATGACAAACATTTTT 67088 ||| |||||||| ||| Sbjct 44937 TAACAACAAACATGTTT 44921 >seq13 Length=415809 Score = 214 bits (236), Expect = 2e-50 Identities = 592/896 (66%), Gaps = 15/896 (2%) Strand=Plus/Plus Query 35867 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 35926 ||||| || ||| || | ||||| || ||||| || ||||| |||| ||||| ||| Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093 Query 35927 TCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAATTCAGAAATC 35986 ||||| || |||||||| ||| | ||||| | | |||| || || || | Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 173153 Query 35987 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 36046 |||||||| || |||||||| | |||| ||||| | ||| |||||| || | | | Sbjct 173154 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 173213 Query 36047 TTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAAT 36105 |||||||| || || || || |||| |||||| || || || | ||||| Sbjct 173214 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 173272 Query 36106 AGATATTACTGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGCGA 36164 | | | || | || || ||| | | ||| || |||| | ||| || | Sbjct 173273 TCTT-TCAATGATCTTTGGATCTGGTTTGTTCTTTAAGTGGGAGAACAATAGACAGGCAA 173331 Query 36165 AATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCA 36224 | || |||| ||| || ||||||| || ||||||||||| || || | || |||| Sbjct 173332 AGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCA 173391 Query 36225 TTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTT 36284 | | || || || | ||| || || | |||||||| ||||| || || | |||| Sbjct 173392 TCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTT 173451 Query 36285 CTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACT 36341 | || || ||||| |||| ||||| || || | | || | | || || ||||| Sbjct 173452 CAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATC 173511 Query 36342 TTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGAT 36401 | |||||| || ||||| | || | ||| || || |||||||| || || | Sbjct 173512 TAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAAGA 173571 Query 36402 AGtttttttCATTACTATCTTTAACATATGTATC-AATCA-AAAGACTATACATTTCCGA 36459 | | ||||| || ||| || | ||||| || ||| | ||||| ||| |||| || Sbjct 173572 AATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGA--ATAAGTTTCAGA 173629 Query 36460 ATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTAC 36519 ||||||||||| || ||||| || ||||||||||| |||| || | ||| || || Sbjct 173630 GTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAAC 173689 Query 36520 TTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAA 36579 ||| | | | || ||| | || |||||||| || || || ||| || ||||| || Sbjct 173690 TTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAA 173749 Query 36580 CGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGT---TTATTCCAATCATT 36636 ||||| || | || ||| || |||| ||| | | | ||||||||||| | Sbjct 173750 AGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTG 173809 Query 36637 GATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 36696 | ||| ||||| | ||| | |||||| | ||||| || || || || || | ||||| Sbjct 173810 TAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATA 173869 Query 36697 CATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATC-TATTTTGATTT 36751 | ||| || || | ||| |||||| || | ||| |||| | ||||| ||| Sbjct 173870 GGCTTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCTTCTTTTGTTTT 173925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172462686440