Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq13 320 2e-82 >seq13 Length=415809 Score = 320 bits (354), Expect = 2e-82 Identities = 605/873 (69%), Gaps = 19/873 (2%) Strand=Plus/Plus Query 13568 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTC 13627 |||||| || |||||||| ||| |||||| ||||||||||| || || ||||| | Sbjct 173021 AATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 173080 Query 13628 CAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATA-AACACTTTATCACAAC 13686 | ||||| ||||||||||| || ||||| || | ||||| |||| || || || Sbjct 173081 TAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGT-GACATTGAACAGCTTTTCGTTAC 173139 Query 13687 CTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13746 ||| | | || |||||||||||||| ||| |||| |||||| ||||| |||| || Sbjct 173140 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 173199 Query 13747 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 13806 ||||||| | || | || ||||| || || || ||||| || |||| Sbjct 173200 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 173259 Query 13807 CCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATT--TTAGATGTTTAAA 13864 | || ||||| || ||| |||| || || | | || ||| || || Sbjct 173260 CTTCAGCAATAATTCTTTCAATGATCT--TTGGATCTGGTTTGTTCTTTAAGTGGGAGAA 173317 Query 13865 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 13924 | || ||| ||||| ||| ||| | || |||||||||| || | |||||| || || Sbjct 173318 CAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAA 173377 Query 13925 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGA 13984 || || || |||||||| || ||| || ||||| || || ||||||||||| || || Sbjct 173378 AGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGA 173437 Query 13985 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14044 || || | || ||||| |||||||| || | | || ||| ||||| | || | || Sbjct 173438 GAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTT 173497 Query 14045 GT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14103 | | || |||||| | |||||||||||| |||| ||||| | || ||||| | Sbjct 173498 ATCTTGA-ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTA 173556 Query 14104 TAGCATTAAATAAATATTCCTTCTCTTTAG--TACTTGAAATGTATGTATC-AATAAGTA 14160 |||| || ||||| | || || || || | | |||| |||||||| || ||||| || Sbjct 173557 TAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTG--ATGTATGTGTCTAATAA-TA 173613 Query 14161 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAG 14220 | ||| |||||||||| ||||||||||| || || ||||| || || || ||| Sbjct 173614 AAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAG 173673 Query 14221 CTTCCGACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14279 |||| | ||| ||||| | || |||| |||| |||| |||||||| || |||||| Sbjct 173674 CTTCTGGAATTTGAACTTCAGCAGAGAAAT-TTTCAACCAAGTTTTCATTGACAATACCA 173732 Query 14280 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTG 14336 ||| ||| ||||| || ||||| | || ||| ||| | || | | |||||| | Sbjct 173733 TCAGAAGCAGCAAAGAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATT 173792 Query 14337 AGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14396 || ||||||||| |||||||||||| | ||| | ||| ||| | ||||| ||| | Sbjct 173793 CTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAA 173852 Query 14397 GCGACAGCTTTTTTATACATTACCCATATTTCT 14429 || | ||| | ||||| | |||| |||||| Sbjct 173853 GCTTCGGCTCTCTTATAGGCTTCCCAAATTTCT 173885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727754139400