Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq13 320 2e-82
>seq13
Length=415809
Score = 320 bits (354), Expect = 2e-82
Identities = 605/873 (69%), Gaps = 19/873 (2%)
Strand=Plus/Plus
Query 13568 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTC 13627
|||||| || |||||||| ||| |||||| ||||||||||| || || ||||| |
Sbjct 173021 AATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 173080
Query 13628 CAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATA-AACACTTTATCACAAC 13686
| ||||| ||||||||||| || ||||| || | ||||| |||| || || ||
Sbjct 173081 TAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGT-GACATTGAACAGCTTTTCGTTAC 173139
Query 13687 CTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13746
||| | | || |||||||||||||| ||| |||| |||||| ||||| |||| ||
Sbjct 173140 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 173199
Query 13747 TCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAG 13806
||||||| | || | || ||||| || || || ||||| || ||||
Sbjct 173200 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 173259
Query 13807 CCTCTTTTATAATAATTGTAATAATCTCATTAGAAGGAGGATATT--TTAGATGTTTAAA 13864
| || ||||| || ||| |||| || || | | || ||| || ||
Sbjct 173260 CTTCAGCAATAATTCTTTCAATGATCT--TTGGATCTGGTTTGTTCTTTAAGTGGGAGAA 173317
Query 13865 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 13924
| || ||| ||||| ||| ||| | || |||||||||| || | |||||| || ||
Sbjct 173318 CAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAA 173377
Query 13925 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGA 13984
|| || || |||||||| || ||| || ||||| || || ||||||||||| || ||
Sbjct 173378 AGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGA 173437
Query 13985 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14044
|| || | || ||||| |||||||| || | | || ||| ||||| | || | ||
Sbjct 173438 GAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTT 173497
Query 14045 GT-TCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAA 14103
| | || |||||| | |||||||||||| |||| ||||| | || ||||| |
Sbjct 173498 ATCTTGA-ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTA 173556
Query 14104 TAGCATTAAATAAATATTCCTTCTCTTTAG--TACTTGAAATGTATGTATC-AATAAGTA 14160
|||| || ||||| | || || || || | | |||| |||||||| || ||||| ||
Sbjct 173557 TAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTG--ATGTATGTGTCTAATAA-TA 173613
Query 14161 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAG 14220
| ||| |||||||||| ||||||||||| || || ||||| || || || |||
Sbjct 173614 AAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAG 173673
Query 14221 CTTCCGACCATTGTACTTCCG-AGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCA 14279
|||| | ||| ||||| | || |||| |||| |||| |||||||| || ||||||
Sbjct 173674 CTTCTGGAATTTGAACTTCAGCAGAGAAAT-TTTCAACCAAGTTTTCATTGACAATACCA 173732
Query 14280 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTG 14336
||| ||| ||||| || ||||| | || ||| ||| | || | | |||||| |
Sbjct 173733 TCAGAAGCAGCAAAGAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATT 173792
Query 14337 AGTTTTTTCCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14396
|| ||||||||| |||||||||||| | ||| | ||| ||| | ||||| ||| |
Sbjct 173793 CTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAA 173852
Query 14397 GCGACAGCTTTTTTATACATTACCCATATTTCT 14429
|| | ||| | ||||| | |||| ||||||
Sbjct 173853 GCTTCGGCTCTCTTATAGGCTTCCCAAATTTCT 173885
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479727754139400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |