Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq13 334 7e-87 >seq13 Length=415809 Score = 334 bits (370), Expect = 7e-87 Identities = 608/873 (70%), Gaps = 19/873 (2%) Strand=Plus/Plus Query 13356 AATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTC 13415 |||||| || |||||||| ||| |||||| |||||||| || || || ||||| | Sbjct 173021 AATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGC 173080 Query 13416 CAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATA-AACACTTTATCACAAC 13474 | ||||| ||||||||||| |||||||| || || ||||| |||| || || || Sbjct 173081 TAAGGATATGTTTTCCATAAAGTCGAATGGGTTGGT-GACATTGAACAGCTTTTCGTTAC 173139 Query 13475 CTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAAT 13534 ||| | | ||||||||||||||||| ||| |||| |||||| ||||| |||| || Sbjct 173140 CTAAGGCAACTAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCAT 173199 Query 13535 TCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAG 13594 ||||||| | || | || ||||| || | || || ||||| || |||| Sbjct 173200 TCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAG 173259 Query 13595 CCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATT--TTAGATGTTTAAA 13652 | || ||||| | | ||| || | || || | | || ||| || || Sbjct 173260 CTTCAGCAATAATTCTTTCAATGATCT--TTGGATCTGGTTTGTTCTTTAAGTGGGAGAA 173317 Query 13653 AATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAA 13712 | || ||| ||||| ||| ||| | || |||||||||| || | |||||| || || Sbjct 173318 CAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAA 173377 Query 13713 TGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGA 13772 || || || |||||||| || ||| || ||||| || || ||||| ||||| || || Sbjct 173378 AGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGA 173437 Query 13773 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTT 13832 || || | || ||||| |||||||| || | |||| ||| ||||| | || | || Sbjct 173438 GAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTT 173497 Query 13833 GT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGA 13891 | |||| |||||| | |||||||||||| |||| ||||| | || ||||| | Sbjct 173498 ATCTTGA-ATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTA 173556 Query 13892 TTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATC-AATAAGTA 13948 | || || ||||| || || || || | | |||| |||||||| || ||||| || Sbjct 173557 TAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTG--ATGTATGTGTCTAATAA-TA 173613 Query 13949 AGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAG 14008 | ||| |||||||||| |||||||| || || || ||||| || ||||| ||| Sbjct 173614 AAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAG 173673 Query 14009 CTTCTGACCATTGTACCTCCG-AGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCA 14067 |||||| ||| || || | || |||| |||| ||||||||||||| ||||||||| Sbjct 173674 CTTCTGGAATTTGAACTTCAGCAGAGAAAT-TTTCAACCAAGTTTTCATTGACAATACCA 173732 Query 14068 TCACTAGCTGCAAAAAATGCCAATATGTTTTTAAT--AAAGTATTGC-TCTTCATTGTTG 14124 ||| ||| ||||| || ||||| | || ||| ||| | || | | |||||| | Sbjct 173733 TCAGAAGCAGCAAAGAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATT 173792 Query 14125 AGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14184 || ||||||||| |||||||||||| | ||| | ||| ||| | ||||| ||| | Sbjct 173793 CTGTTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAA 173852 Query 14185 GCGACAGCTTTTTTATACATTACCCATATTTCT 14217 || | ||| | ||||| | |||| |||||| Sbjct 173853 GCTTCGGCTCTCTTATAGGCTTCCCAAATTTCT 173885 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588554723240