Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq4 468 7e-127 seq13 188 1e-42 >seq4 Length=144043 Score = 468 bits (518), Expect = 7e-127 Identities = 1426/2182 (65%), Gaps = 77/2182 (4%) Strand=Plus/Minus Query 70918 ATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTT 70977 || ||||| ||||| || ||| |||||| ||||| ||| || || |||||||| | Sbjct 47074 ATATGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCAGCCATATCA 47015 Query 70978 ATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGG 71036 ||||| |||||||||| | |||||||| ||||||||| || || ||| || |||| || Sbjct 47014 ATGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGG 46956 Query 71037 AAGGTTTGT--ATTCT-GAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTC 71093 || ||||| ||| | | || || ||| | ||||| || || || || |||| Sbjct 46955 AATGTTTGGTAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTC 46896 Query 71094 ATTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATT 71152 || ||| ||| | | || |||| | | | | | || || || | ||| ||| Sbjct 46895 ATCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATT 46837 Query 71153 CTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTAT 71212 | ||||| || ||| | || ||| || ||| || | ||||| | | ||||| | Sbjct 46836 CACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCATTGT 46777 Query 71213 TTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAA 71272 || |||||||| | ||| || ||||| |||||||| || ||||||| ||||| | Sbjct 46776 AACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTA 46717 Query 71273 GACCATGTGATCGG--ATTTTATCTTTTAGAGATTC---CCAATTCCA-AAGATCCGATG 71326 ||| ||| | || || ||| | || | |||| ||||| ||| ||| | | || Sbjct 46716 AACC--GTGCTTGGCAATCTTAGCCTTCA---ATTCAGTCCAATCCCATAAGGTA-GTTG 46663 Query 71327 GTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATG 71386 | |||| | || | | ||| || ||| | || | Sbjct 46662 GAGCAACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAG 46603 Query 71387 TATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAA 71446 | | || | |||||| |||| |||| |||| || || || || | | ||||| Sbjct 46602 AAGCATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAA 46543 Query 71447 TGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTA 71506 ||||||||||||| | | || | || | |||| ||| |||||| ||| Sbjct 46542 TGGTTTCGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGAATCGAATGGAACTCTTA 46483 Query 71507 AGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTAT 71566 | | ||||| | || || || |||||||| || | | ||||||||||||||| | | Sbjct 46482 ACATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGT 46423 Query 71567 TAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 71626 | || || ||| | || ||| ||||| || | || |||| || | | ||| Sbjct 46422 TGGATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTC 46364 Query 71627 TGA-CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA--------TCTCCC-A 71676 | | | || || || || || | ||||| || ||| | ||| | Sbjct 46363 TTAGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCATAAGTTTGAGTCTTTTGA 46304 Query 71677 TCTA---------TTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACC 71727 ||| ||||||| | ||||||||||| || | |||||||| || Sbjct 46303 TCTTCGGAGACCTTTACAAAGGCTGGTAAGGCAACAGAAGCTAAGTTACAAACAGCAGTT 46244 Query 71728 TCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCT 71787 || ||| |||| | |||| | ||||||| || | ||| | | || || || || Sbjct 46243 TCCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACCC 46184 Query 71788 AAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCA 71847 || || | ||||||| ||||| ||||| |||||||| |||| ||| || ||||||||| Sbjct 46183 AAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACCA 46124 Query 71848 GTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTG 71907 ||||| | || | ||||| || || | ||| | | ||||||| || | || | Sbjct 46123 GTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTCTT--TC 46066 Query 71908 TATCTCTT--TTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCAT 71965 || |||| |||| ||||||||| ||||| ||| || || || || |||||| Sbjct 46065 TACCTCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCATCACCATAAGCAT 46006 Query 71966 TGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTC 72025 || |||||| |||| | ||| | | || | ||| || |||| | || |||| Sbjct 46005 CACTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTC 45946 Query 72026 GTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCT 72085 ||||| || | ||||||||||| | |||| |||| |||||| | ||| || | Sbjct 45945 TCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTT 45886 Query 72086 CGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCA 72145 | || || ||| ||| | | |||| ||| | | |||||||| ||||| ||||| | Sbjct 45885 CCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTA 45826 Query 72146 AGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGT 72205 ||| | || | | || || | |||||| || || ||||| | |||||| || |||| Sbjct 45825 GGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACGTATCTGGCAGTGT 45766 Query 72206 TATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATAT 72265 | || ||||||| | ||| || || | ||||||||| | ||||||||| || | || | Sbjct 45765 TGTTGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGCAATGT 45706 Query 72266 AGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGA 72325 | ||| ||| | || ||| ||| || ||| || || || || | ||||| | Sbjct 45705 AAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTTAGAAA 45646 Query 72326 TTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAA 72385 || || ||| ||||| ||||||||||| || || ||| ||||||| |||| || Sbjct 45645 TTTGAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAAA 45586 Query 72386 GTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 72445 || ||||| ||||||||| | | ||| || ||||| |||| || ||||||| Sbjct 45585 TTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAG 45526 Query 72446 CGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTAT-ATCC 72504 | || ||||| || ||| ||||| | ||||| || || || || ||| || | Sbjct 45525 CATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTT 45466 Query 72505 CATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTG 72564 || | || || || || || || | ||| | || ||| || ||||||||||||||||| Sbjct 45465 CACCG-TGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTTA 45407 Query 72565 TTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 72622 ||| || ||||| ||||| ||| ||||||| || || ||||||||||||||||| || Sbjct 45406 CCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTG 45347 Query 72623 AAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAAC----- 72677 ||| |||| ||| | |||||| | || | |||| || | ||| |||| Sbjct 45346 AAA--TCTCTATCGAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTT 45289 Query 72678 TATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 72737 | || ||| | | ||||| || ||||| |||||| | ||||| || Sbjct 45288 TGTAAACATCATCA-----GAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTA 45234 Query 72738 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT--T 72795 |||| |||| || || || |||| | ||||| |||||| |||| |||||||| || | Sbjct 45233 GTTGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACT 45174 Query 72796 GATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGC 72854 ||| ||| ||||||||||| |||| |||||||| ||||| || || || || ||| Sbjct 45173 GAT--GGCGATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGC 45117 Query 72855 TGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTG 72914 |||| || || | | || ||||| | || || || || | || | || Sbjct 45116 ACAAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGA 45057 Query 72915 GATAACCTTCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACAT 72972 ||||| ||| | | ||||| | |||||| ||||| | || | ||| ||||| ||| Sbjct 45056 GATAA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCAT 44999 Query 72973 AATTTTCTAATACGAGACGTGATTTTATCAAACATAAC----ATTTTCCCGGCATCCATT 73028 ||| | ||| | || || ||||||||||| ||| | ||| | ||| | Sbjct 44998 AATCTAGCAATTCTGGATGTAATTTTATCAAATTGAACTGGAACTTT----TCTTCCGTC 44943 Query 73029 TCGTTTAACGACAAACATTTTT 73050 || |||||| |||||||| ||| Sbjct 44942 TCTTTTAACAACAAACATGTTT 44921 >seq13 Length=415809 Score = 188 bits (208), Expect = 1e-42 Identities = 577/885 (65%), Gaps = 14/885 (2%) Strand=Plus/Plus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 ||||| || ||| || | ||||| || ||||| ||||| || | || ||||| ||| Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || || || || ||||| ||||| | | |||| || || || | Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 173153 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 |||||||| || | ||||| | |||| ||||| | ||| |||||| || | | | Sbjct 173154 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 173213 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 |||||||| || || || || |||| |||||| || || || | ||||| Sbjct 173214 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 173272 Query 42013 AGATCTTAC--TGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGC 42069 |||| | || | || || ||| | | ||| || |||| | ||| || Sbjct 173273 ---TCTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAGTGGGAGAACAATAGACAGGC 173329 Query 42070 GAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 42129 || || || | ||| |||||||||| || ||||||||||| || || | || || Sbjct 173330 AAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGG 173389 Query 42130 CATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCC 42189 ||| | || || || | ||| || |||| |||||||| ||||| || |||| || Sbjct 173390 CATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACC 173449 Query 42190 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCA---TAACCGGCACTGTCATGTATCCA 42246 ||| || || ||||| |||| ||||| || || || || | | || || ||||| Sbjct 173450 TTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCA 173509 Query 42247 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAG 42306 | |||||| || ||||| | || | ||| || |||||||| || || || | Sbjct 173510 TCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAA 173569 Query 42307 ATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGA 42366 | | ||||| || ||| || | ||||| || | || | | ||| |||| || Sbjct 173570 GAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGA 173629 Query 42367 ATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTAC 42426 ||||||||||| || || || || ||||||||||| | || || | || || || Sbjct 173630 GTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAAC 173689 Query 42427 TTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAA 42486 ||| | | | || |||| | || ||||| || || || || ||| || ||||| || Sbjct 173690 TTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAA 173749 Query 42487 CGCCAATACATGTTTTATAAAATATTTTTC---GTCCGGTGTTAATTTATTCCAATCATT 42543 ||||| || | || ||| || |||| || || ||||||||||| | Sbjct 173750 AGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTG 173809 Query 42544 GATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATA 42603 | ||| ||||| | ||| | |||||| | ||||| || || ||||| || | ||||| Sbjct 173810 TAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATA 173869 Query 42604 CATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 | ||| || || | ||| ||||||||| | ||| ||||| Sbjct 173870 GGCTTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCT 173914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138856041160