Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq1 163 2e-35
seq18 131 1e-25
>seq1
Length=1362551
Score = 163 bits (180), Expect = 2e-35
Identities = 174/230 (76%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| |||||||| ||||| || | ||||| |||||||| |||||||| || |
Sbjct 277376 CCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAT 277435
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| | |||| | ||||||||||| || |||||| | || || | |||||| || ||||
Sbjct 277436 AAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGA 277495
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||||||||| ||||| ||| ||| | || || | ||| | ||| ||
Sbjct 277496 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACC 277555
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366
|| || |||||||| ||||| || ||||||||||| ||||||||||| ||
Sbjct 277556 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 277605
>seq18
Length=128875
Score = 131 bits (144), Expect = 1e-25
Identities = 168/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||||||||||| |||||| || || || || |||||||| ||||||||||| |
Sbjct 91034 CCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGAT 90975
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
| |||| |||||||||||||||| ||||| | || || | |||||| || ||||
Sbjct 90974 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 90915
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||| ||||| || ||| ||| ||| || || || || | ||| ||
Sbjct 90914 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACT 90855
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTG 15368
|| || || ||||| ||||| || | || || |||||| | | ||| |||
Sbjct 90854 TCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAAACTGTTTATAATTG 90803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362179019023581
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |