Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq13 250 2e-61 >seq13 Length=415809 Score = 250 bits (276), Expect = 2e-61 Identities = 581/854 (68%), Gaps = 39/854 (5%) Strand=Plus/Plus Query 12860 TTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTT 12919 |||||||| || |||||| |||||||| || || || || || |||| || || ||| Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093 Query 12920 TCCATAAAATCGAAAGGATTTTTCGAAC--AATAGTATTTT-TTACACCCTAATTCTAGT 12976 |||||||| ||||| || || | | || || ||| |||| |||| | | | Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTAC---CTAAGGCAACT 173150 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 || ||||| ||||||||||| || | || || ||||||| |||| ||||| || | | Sbjct 173151 AATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGT 173210 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGttt---ttttCTATATCAACTGCTTCGATA 13093 ||| || || || || || | ||||| | ||||| || ||||| ||||| | Sbjct 173211 AATGCAACTGGAATGGCATCA---ACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCA 173267 Query 13094 ACTATGTCTCTTATTACGTTCTCTAATGGAG--GATTTGAT----AGATGCTTAAACATC 13147 | || |||| | | ||| | ||| | |||| | | || |||| Sbjct 173268 ATAAT---TCTTTCAATGATCTTT---GGATCTGGTTTGTTCTTTAAGTGGGAGAACAAT 173321 Query 13148 ATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTT 13207 | ||| ||||| ||| || || ||||||||||||| || | ||||| || || || Sbjct 173322 AGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTC 173381 Query 13208 AGACCCGGCAT-AAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaa 13266 | ||| ||||| || |||| || || || ||| || ||||||||||| ||||| || || Sbjct 173382 AAACCAGGCATCAAACCCTTTTTCTTCAA-CCAGAAGATAGCAGCAAATGAACCAGAGAA 173440 Query 13267 aaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACT 13326 ||| | |||||||| || ||||| || | || |||||| || || | | ||| Sbjct 173441 AAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATC 173500 Query 13327 CTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACG-CAGTTCATATTTTCTATTG 13385 | ||||| | | ||||| | || |||| |||| ||| ||| ||||||| | Sbjct 173501 TTGAATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGA-ATAGTTTCTATAG 173559 Query 13386 CGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTAT 13445 |||| ||||| ||| |||||||| || || || || |||| ||||| || Sbjct 173560 CGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAAT 173619 Query 13446 ACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTG 13505 | |||| || ||||| ||||||||| ||||||||||| || ||||| |||| |||| Sbjct 173620 AAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTG 173679 Query 13506 ATACCTGAACTTC-GGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTA 13564 | |||||||| | || |||| |||| | |||||||| || || || || ||| | Sbjct 173680 GAATTTGAACTTCAGCAGAGAAAT-TTTCAACCAAGTTTTCATTGACAATACCATCAGAA 173738 Query 13565 GCAGCaaaaaaaG-CAAGTATGTGCTT--AATAAAttttttttCGTTTTCTGACA-ACT- 13619 |||||||| |||| |||| | ||| ||| || | |||| ||||| || || Sbjct 173739 GCAGCAAAGAAAGCCAAGACT---CTTGAAATGAAAAATCTTTCATTTTCATTCATTCTG 173795 Query 13620 TTA-ACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCA 13678 ||| |||||| | ||||| || || ||||| | || ||| ||||||| |||||||| Sbjct 173796 TTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCT 173855 Query 13679 ACAGCCTTCTTATA 13692 | || ||||||| Sbjct 173856 TCGGCTCTCTTATA 173869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982184643482