Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq13 197 3e-45
seq1 185 2e-41
seq18 136 9e-27
>seq13
Length=415809
Score = 197 bits (218), Expect = 3e-45
Identities = 378/547 (69%), Gaps = 10/547 (2%)
Strand=Plus/Minus
Query 268754 GCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGATTGG 268813
|||| |||||||| ||||| | |||||| | ||| ||||| | || ||| ||||||
Sbjct 173860 GCCGAAGCTTCTTTCTGGACCGCTGAAGAAATCGATTTGTCTAAGGATTTACACGATTGG 173801
Query 268814 AAAAATTTAA--AACCAGAA-GAAAGAAGATTTATATCTTATATTCTTGCGTTT-TTTGC 268869
|| || || || | || |||||| || || || | | ||||| ||| |||||
Sbjct 173800 AATAACAGAATGAATGAAAATGAAAGATTTTTCATTTCA-AGAGTCTTGGCTTTCTTTGC 173742
Query 268870 AGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGGTACAGAT 268929
| | ||||||||| || || ||||| | || || || |||| | || || || ||
Sbjct 173741 TGCTTCTGATGGTATTGTCAATGAAAACTTGGTTGAAAATTTCTCTGCTGAAGTTCAAAT 173682
Query 268930 TCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATTCAGAGAT 268989
||| ||||| | ||||| ||||| ||||| || || ||||| ||||| || || |
Sbjct 173681 TCCAGAAGCTAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCTGAAAC 173622
Query 268990 GTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGACTATTTTC 269049
|| | ||||| |||| || || || | ||| || ||||| | ||||
Sbjct 173621 TTATTCTTTATTATTAGACACATACATCAAGGATCCAAAGGAAAATGATTTCTTATTAAA 173562
Query 269050 TTCTATGAGAACTATGGACTGTG-TGAGaaaaaaaTCTGAATGGGCTCTGAAATGGATAA 269108
|||| |||||| ||| | | |||| ||||||||||| | | ||||||
Sbjct 173561 CGCTATAGAAACTATTC-CTGAAATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTC 173503
Query 269109 ACGATAGCG-CGCCTTAC--GGAGAAAGGTTAGTTGCTTTTGCCGCTGTAGAAGGTATAT 269165
| |||| | ||| || | ||||| | ||||||||||| ||||| |||||| | |
Sbjct 173502 AAGATAAGGACGCTTTGTTTGCTGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCT 173443
Query 269166 TCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTTATGCCAGGAT 269225
| || || || || ||||| |||||||| ||||||||||||| || | ||||| || |
Sbjct 173442 TTTTCTCTGGTTCATTTGCTGCTATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTT 173383
Query 269226 TAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGACTTCGCTTGTT 269285
| |||||||| ||||||||||| | || || ||||||||||| ||||| || |||
Sbjct 173382 TGACTTTCTCCAACGAATTGATCTGTAGAGATGAAGGTTTACATACTGACTTTGCCTGTC 173323
Query 269286 TATTATT 269292
|||| ||
Sbjct 173322 TATTGTT 173316
>seq1
Length=1362551
Score = 185 bits (204), Expect = 2e-41
Identities = 180/232 (78%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||||| || | |||| ||||| || |||||||| ||||| || |||||||||
Sbjct 277376 CCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAT 277435
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| ||||||||| ||||||| ||| || ||||| || |||| || ||||||||||| ||
Sbjct 277436 AAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGA 277495
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| |||||||| || || || || || || ||||| || | | ||| || ||| |||
Sbjct 277496 ATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACC 277555
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGT 104564
|| | ||||| ||||||||||| || |||||||| || || ||||||||||
Sbjct 277556 TCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTTGT 277607
>seq18
Length=128875
Score = 136 bits (150), Expect = 9e-27
Identities = 161/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| | || || |||| |||| ||||||||||| || || || || ||||||
Sbjct 91034 CCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGAT 90975
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| |||||||||||||||| |||||| |||||||| |||| || ||||||||||| ||
Sbjct 90974 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 90915
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512
|| ||||| || || || ||||| || || ||| || | || || || ||| ||
Sbjct 90914 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACT 90855
Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAA 104550
|| | || || |||||||| || | || || |||||
Sbjct 90854 TCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 90817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397795156028
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |