Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1 201 1e-46 seq38 159 4e-34 >seq1 Length=1362551 Score = 201 bits (222), Expect = 1e-46 Identities = 470/694 (68%), Gaps = 50/694 (7%) Strand=Plus/Minus Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869 ||||||||| | ||| | || |||||| |||| |||||||| || | || ||||| Sbjct 1128919 TTGTTCTTTCAAAGCATCTACATGATCCTTGTAAACGTGAGCATCACCCATGGTGTGAAT 1128860 Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929 ||||||||| | |||||||||| | | ||||| | || || || |||||||| Sbjct 1128859 AAATTCACCACAATCCATATCAACAACCTTTGCAATCATTCTGGTCAACAAAGCATAAGA 1128800 Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984 ||| | || ||||| ||||| || |||||||| |||||||| |||| || ||| Sbjct 1128799 AGCAATGTTGAAAGGAACACCCAACCCCATATCACAAGATCTTTGGTATAAGATACATGA 1128740 Query 6985 CAAGATAAAATATT-GTCTATAG---------CATAAAATTGACACAATACATGACATGG 7034 ||| | | || |||| ||| |||| |||||||| || || || ||||| Sbjct 1128739 CAATTGAGGCTTTTGGTCTTTAGGGAAAGAAACATAGAATTGACAGAAAACGTGGCATGG 1128680 Query 7035 AGGTAAAACAGCC-TGATCT--ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCT 7091 || || |||| | ||| | || | |||||||||||||| ||| | || | ||| Sbjct 1128679 CGG---AAGAGCCATTTTCTTAAAGTCTGGTGGATTCCAAGCAGACATGATGATTCTTCT 1128623 Query 7092 ATCATTTGGATTTGTTTTTAA-TTTTGTTATAATTATTT---GTAATTGATC-TATACCC 7146 ||| | ||||| || || || || || |||||| | ||||||||| ||| || Sbjct 1128622 ATCGTAAGGATTGGTCTTCAACTTATG----AATTATATCGCTTAATTGATCGTAT-CCT 1128568 Query 7147 TGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAAC 7206 | | || | ||| ||||||| | ||| | ||| ||||||||||||||||| || Sbjct 1128567 TTGTTTGTGTAGTCAGTGTGACAATCAACATATTCAGCACCAAAATGTCTCCATTGGAAA 1128508 Query 7207 CCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTTAAATTA 7266 ||||||| ||||||||||||||||||||| | | | | || || | || || || Sbjct 1128507 CCATAAACAGGACCTAAATCACCTTCTTCTCTGTCAGTTAACCCAA---GA--GAATCTA 1128453 Query 7267 GATTTT-----GATCCATAAGCATCCCAAATATGTACAGAtttttttGATAAATTTAAAG 7321 | | || || |||| | |||||||||| | || || |||| || |||| Sbjct 1128452 GGTATTCACGAGAACCATTACCATCCCAAATTTTGACGCCTTCTTTTTGTAGATTTTTGT 1128393 Query 7322 AATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTCTACTATTCCACGCCAAAACATTC 7381 ||| ||| ||| |||| ||||| | ||||||| ||| || | ||| | || Sbjct 1128392 TATTGGTATCTCCCTTAACAAACCAAAGAAGTTCTACTATAATAGCTTTGGTAAATACTC 1128333 Query 7382 TTTTTGTAGTGAATAAAGGGAA-----TGTACTTAAAT-CATATCT--ATTCT-GTAAAC 7432 ||||||| || |||||||| || ||| |||| | | |||| ||| | || Sbjct 1128332 TTTTTGTTGTTAATAAAGGAAATTTGTTGTCTTTAAGTGAAAATCTTAATTGTGGTGGTG 1128273 Query 7433 CAAATACTGAAAGAGTACCTGTTCCAGTTCTATC 7466 |||||| || | ||| ||||| || |||||||| Sbjct 1128272 CAAATATCGATAAAGTTCCTGTACCGGTTCTATC 1128239 Score = 84.2 bits (92), Expect = 3e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400 ||||| | ||||| | ||| |||| ||||| || || |||||| || |||||| | Sbjct 919210 TAAGAACCACTAAAGTTCCTCAAATTGGTGACAAATTCGCTTCTAGACATGGTCAAAAGG 919151 Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460 | ||| |||||| | || | |||||||||||| || ||| || ||||| |||| Sbjct 919150 GTACAATTGGTATTACCTACAGAAGAGAAGATATGCCGTTCACTTCTGAAGGTATTGTGC 919091 Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCC 19491 | ||| | ||||| || || |||||| |||| Sbjct 919090 CTGATTTGATTATCAATCCCCATGCTATTCC 919060 >seq38 Length=279578 Score = 159 bits (176), Expect = 4e-34 Identities = 396/596 (66%), Gaps = 24/596 (4%) Strand=Plus/Minus Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457 || |||||||| ||||| || ||||| || ||| ||||| ||| ||||||||| || Sbjct 131882 AAGTTTGAAGATATGGGTGTTGGTGGGCTGGATAAGGAATTCACTCAAATTTTCAGAAGA 131823 Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517 || |||||||| ||| | | ||| || | ||| ||||| || | || | Sbjct 131822 GCCTTTGCTTCAAGAATATTCCCTCCGCAAGTCATAGCCAAATTGGGTATTTCCCACGTC 131763 Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577 ||||| ||||| || | || ||||| ||| ||||| || || || || || ||| Sbjct 131762 AAAGGTCTTTTACTATACGGTCCTCCAGGTACAGGTAAGACTTTGATTGCGAGAAAAATT 131703 Query 164578 GCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633 | | || | || ||| || || || ||| |||||||||||||||||| |||||| Sbjct 131702 GGT-AATATGTTGAAT-GCAAAAGAACC--TAAGATTGTTAATGGTCCTGAAATATTGAG 131647 Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693 || ||||| ||| || |||| || ||||||| ||||| |||| ||||| |||| Sbjct 131646 TAAGTATGTTGGTTCTTCTGAAGAAAACATTAGAAATTTGTTCAAGGATGCTGAGCAAGA 131587 Query 164694 ACAAAAGAAAGCAGGTTTAGCTAGTAA--ATTACATGTTATTGTTTTTGATGAGATAGAT 164751 | | ||| |||| || | | | ||||| ||||| | |||||||| | ||| Sbjct 131586 ATATAAGTCTAAAGGTGAAG--AATCATCTTTACACATTATTATCTTTGATGAATTGGAT 131529 Query 164752 GCTCTTTGCAAAAA---------ACGTGGTGATAATA---TTATTCATGATGCAGTGGTT 164799 || ||| |||| | | | |||||| || | | |||| || ||| Sbjct 131528 TCTGTTTTCAAACAAAGAGGTTCAAGAGGTGATGGTACAGGTGTAGGTGATAATGTTGTT 131469 Query 164800 AATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGT 164859 || |||||| | | || || |||||||| || |||||||||||||| || | ||| Sbjct 131468 AACCAGTTGTTAGCCAAGATGGATGGTGTTGATCAATTAAATAATATTTTGGTTATTGGT 131409 Query 164860 ATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTG 164919 ||||| || || ||| | || ||| | ||| | || |||| ||| |||| ||| | Sbjct 131408 ATGACAAATAGAAGAGATCTTATAGATAACGCTCTTTTGAGACCAGGTAGATTTGAAGTT 131349 Query 164920 AAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCA 164975 || | ||||| |||| || ||| || | | ||||||||| || |||| Sbjct 131348 CAAGTTGAAATCAAGCTACCTGATGAAGCTGGTAGATTGCAAATTTTAGAAATTCA 131293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871694615600