Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq1 201 1e-46
seq38 159 4e-34
>seq1
Length=1362551
Score = 201 bits (222), Expect = 1e-46
Identities = 470/694 (68%), Gaps = 50/694 (7%)
Strand=Plus/Minus
Query 6810 TTGTTCTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAAT 6869
||||||||| | ||| | || |||||| |||| |||||||| || | || |||||
Sbjct 1128919 TTGTTCTTTCAAAGCATCTACATGATCCTTGTAAACGTGAGCATCACCCATGGTGTGAAT 1128860
Query 6870 AAATTCACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGA 6929
||||||||| | |||||||||| | | ||||| | || || || ||||||||
Sbjct 1128859 AAATTCACCACAATCCATATCAACAACCTTTGCAATCATTCTGGTCAACAAAGCATAAGA 1128800
Query 6930 AGCTACATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTG--ATAACAT---TGA 6984
||| | || ||||| ||||| || |||||||| |||||||| |||| || |||
Sbjct 1128799 AGCAATGTTGAAAGGAACACCCAACCCCATATCACAAGATCTTTGGTATAAGATACATGA 1128740
Query 6985 CAAGATAAAATATT-GTCTATAG---------CATAAAATTGACACAATACATGACATGG 7034
||| | | || |||| ||| |||| |||||||| || || || |||||
Sbjct 1128739 CAATTGAGGCTTTTGGTCTTTAGGGAAAGAAACATAGAATTGACAGAAAACGTGGCATGG 1128680
Query 7035 AGGTAAAACAGCC-TGATCT--ATATCAGATGGATTCCAAGCAGTCATTAAAATACGTCT 7091
|| || |||| | ||| | || | |||||||||||||| ||| | || | |||
Sbjct 1128679 CGG---AAGAGCCATTTTCTTAAAGTCTGGTGGATTCCAAGCAGACATGATGATTCTTCT 1128623
Query 7092 ATCATTTGGATTTGTTTTTAA-TTTTGTTATAATTATTT---GTAATTGATC-TATACCC 7146
||| | ||||| || || || || || |||||| | ||||||||| ||| ||
Sbjct 1128622 ATCGTAAGGATTGGTCTTCAACTTATG----AATTATATCGCTTAATTGATCGTAT-CCT 1128568
Query 7147 TGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAAC 7206
| | || | ||| ||||||| | ||| | ||| ||||||||||||||||| ||
Sbjct 1128567 TTGTTTGTGTAGTCAGTGTGACAATCAACATATTCAGCACCAAAATGTCTCCATTGGAAA 1128508
Query 7207 CCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCCTAATCGATTTAAATTA 7266
||||||| ||||||||||||||||||||| | | | | || || | || || ||
Sbjct 1128507 CCATAAACAGGACCTAAATCACCTTCTTCTCTGTCAGTTAACCCAA---GA--GAATCTA 1128453
Query 7267 GATTTT-----GATCCATAAGCATCCCAAATATGTACAGAtttttttGATAAATTTAAAG 7321
| | || || |||| | |||||||||| | || || |||| || ||||
Sbjct 1128452 GGTATTCACGAGAACCATTACCATCCCAAATTTTGACGCCTTCTTTTTGTAGATTTTTGT 1128393
Query 7322 AATTTGTAGATCCTTTAAGGAACCATAAAAGTTCTTCTACTATTCCACGCCAAAACATTC 7381
||| ||| ||| |||| ||||| | ||||||| ||| || | ||| | ||
Sbjct 1128392 TATTGGTATCTCCCTTAACAAACCAAAGAAGTTCTACTATAATAGCTTTGGTAAATACTC 1128333
Query 7382 TTTTTGTAGTGAATAAAGGGAA-----TGTACTTAAAT-CATATCT--ATTCT-GTAAAC 7432
||||||| || |||||||| || ||| |||| | | |||| ||| | ||
Sbjct 1128332 TTTTTGTTGTTAATAAAGGAAATTTGTTGTCTTTAAGTGAAAATCTTAATTGTGGTGGTG 1128273
Query 7433 CAAATACTGAAAGAGTACCTGTTCCAGTTCTATC 7466
|||||| || | ||| ||||| || ||||||||
Sbjct 1128272 CAAATATCGATAAAGTTCCTGTACCGGTTCTATC 1128239
Score = 84.2 bits (92), Expect = 3e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400
||||| | ||||| | ||| |||| ||||| || || |||||| || |||||| |
Sbjct 919210 TAAGAACCACTAAAGTTCCTCAAATTGGTGACAAATTCGCTTCTAGACATGGTCAAAAGG 919151
Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460
| ||| |||||| | || | |||||||||||| || ||| || ||||| ||||
Sbjct 919150 GTACAATTGGTATTACCTACAGAAGAGAAGATATGCCGTTCACTTCTGAAGGTATTGTGC 919091
Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCC 19491
| ||| | ||||| || || |||||| ||||
Sbjct 919090 CTGATTTGATTATCAATCCCCATGCTATTCC 919060
>seq38
Length=279578
Score = 159 bits (176), Expect = 4e-34
Identities = 396/596 (66%), Gaps = 24/596 (4%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| ||||| || ||||| || ||| ||||| ||| ||||||||| ||
Sbjct 131882 AAGTTTGAAGATATGGGTGTTGGTGGGCTGGATAAGGAATTCACTCAAATTTTCAGAAGA 131823
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|| |||||||| ||| | | ||| || | ||| ||||| || | || |
Sbjct 131822 GCCTTTGCTTCAAGAATATTCCCTCCGCAAGTCATAGCCAAATTGGGTATTTCCCACGTC 131763
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
||||| ||||| || | || ||||| ||| ||||| || || || || || |||
Sbjct 131762 AAAGGTCTTTTACTATACGGTCCTCCAGGTACAGGTAAGACTTTGATTGCGAGAAAAATT 131703
Query 164578 GCTCAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAA 164633
| | || | || ||| || || || ||| |||||||||||||||||| ||||||
Sbjct 131702 GGT-AATATGTTGAAT-GCAAAAGAACC--TAAGATTGTTAATGGTCCTGAAATATTGAG 131647
Query 164634 CAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGA 164693
|| ||||| ||| || |||| || ||||||| ||||| |||| ||||| ||||
Sbjct 131646 TAAGTATGTTGGTTCTTCTGAAGAAAACATTAGAAATTTGTTCAAGGATGCTGAGCAAGA 131587
Query 164694 ACAAAAGAAAGCAGGTTTAGCTAGTAA--ATTACATGTTATTGTTTTTGATGAGATAGAT 164751
| | ||| |||| || | | | ||||| ||||| | |||||||| | |||
Sbjct 131586 ATATAAGTCTAAAGGTGAAG--AATCATCTTTACACATTATTATCTTTGATGAATTGGAT 131529
Query 164752 GCTCTTTGCAAAAA---------ACGTGGTGATAATA---TTATTCATGATGCAGTGGTT 164799
|| ||| |||| | | | |||||| || | | |||| || |||
Sbjct 131528 TCTGTTTTCAAACAAAGAGGTTCAAGAGGTGATGGTACAGGTGTAGGTGATAATGTTGTT 131469
Query 164800 AATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAGGT 164859
|| |||||| | | || || |||||||| || |||||||||||||| || | |||
Sbjct 131468 AACCAGTTGTTAGCCAAGATGGATGGTGTTGATCAATTAAATAATATTTTGGTTATTGGT 131409
Query 164860 ATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAATTG 164919
||||| || || ||| | || ||| | ||| | || |||| ||| |||| ||| |
Sbjct 131408 ATGACAAATAGAAGAGATCTTATAGATAACGCTCTTTTGAGACCAGGTAGATTTGAAGTT 131349
Query 164920 AAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTTAAAAGTTCA 164975
|| | ||||| |||| || ||| || | | ||||||||| || ||||
Sbjct 131348 CAAGTTGAAATCAAGCTACCTGATGAAGCTGGTAGATTGCAAATTTTAGAAATTCA 131293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595871694615600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |