Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq4 428 6e-115
seq13 178 2e-39
>seq4
Length=144043
Score = 428 bits (474), Expect = 6e-115
Identities = 1493/2300 (65%), Gaps = 79/2300 (3%)
Strand=Plus/Minus
Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054
||||||||||| | || || || | || || | | |||||||| || || || | |
Sbjct 47191 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 47132
Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 62112
|| ||||| ||||| || ||||| |||| || || | || | || |
Sbjct 47131 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATGGTTGGGGCCATG--A 47074
Query 62113 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62172
|||| || ||||| || ||| |||||| ||||| ||| || || |||||||| | |
Sbjct 47073 TATGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCAGCCATATCAA 47014
Query 62173 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62231
|||| |||||||||| | |||||||| ||||||||| || || ||| || |||| |||
Sbjct 47013 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 46955
Query 62232 AGGTTTGT--ATTCT-GAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62288
| ||||| ||| | | || || ||| | || || || || ||| || | |||
Sbjct 46954 ATGTTTGGTAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 46895
Query 62289 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 62347
| ||| ||| | | || |||| | | | | | || || || | ||| ||||
Sbjct 46894 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 46836
Query 62348 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62407
||||| || ||| | || ||| || ||| || | ||||| | | ||||| |
Sbjct 46835 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTA 46776
Query 62408 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62467
|| |||||||| | ||| || ||||| |||||||| || |||||||| ||||| |
Sbjct 46775 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 46716
Query 62468 ACCGTATGTTCTGATTTTATCTTTTAGAGGTTC---CCAATTCCA-AAGATCCGACGGTA 62523
||||| | || ||| | || | ||| ||||| ||| ||| | | ||
Sbjct 46715 ACCGTGCTTGGCAATCTTAGCCTTCAA---TTCAGTCCAATCCCATAAGGTA-GTTGGAG 46660
Query 62524 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62583
|||| ||||| || ||| | | || || ||| | || | |
Sbjct 46659 CAACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAG 46600
Query 62584 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62643
| || | |||||| | ||||||| |||| || || || ||| ||| ||||||||
Sbjct 46599 CATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGG 46540
Query 62644 TTTCGAAGATCTTCTTATTTAGATCTTGTGCTTC--CAGGCTATCAAATGGATAATTTAA 62701
||||||| || | | || | || | |||| ||| ||| |||||| ||||
Sbjct 46539 TTTCGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGA--ATCGAATGGAACTCTTAA 46482
Query 62702 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62761
| ||||| | || || || ||||||||||| | | |||||||| |||||| | ||
Sbjct 46481 CATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTT 46422
Query 62762 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 62821
|| || ||| | || ||| ||||| || | || |||| || | | ||||
Sbjct 46421 GGATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCT 46363
Query 62822 GA-CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA----------------- 62863
| |||| || || || || | ||||| || ||| |
Sbjct 46362 TAGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCATAAGTTTGAGTCTTTTGAT 46303
Query 62864 --TCGCCCATCTATTACAAACA-TGTTCAAGGCAACAGATGCCAGATTACAAACGGCTAC 62920
||| | || ||||||| || | ||||||||||| || | |||||||| ||
Sbjct 46302 CTTCGGAGACCT-TTACAAAGGCTGGT-AAGGCAACAGAAGCTAAGTTACAAACAGCAGT 46245
Query 62921 CTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCC 62980
|| ||| |||| | |||| | || ||| || | ||| | | || || || ||
Sbjct 46244 TTCCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACC 46185
Query 62981 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 63040
|| || | ||||||| ||||| ||||| |||||||| |||| |||||| ||||||||
Sbjct 46184 CAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACC 46125
Query 63041 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 63100
|||||| | || | ||||| || || | ||| | | ||||||| || | |||
Sbjct 46124 AGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTC--TTT 46067
Query 63101 GTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63158
|| ||| | |||| ||||||| | ||| | ||| || || || || || ||
Sbjct 46066 CTACCTCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCATCACCATAAGCA 46007
Query 63159 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63218
| ||| |||||| |||| ||| | | || | ||| || || | |||| |||
Sbjct 46006 TCACTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACT 45947
Query 63219 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 63278
| ||||| || | ||||||||||| | |||| |||| |||||| | ||| |||
Sbjct 45946 CTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCT 45887
Query 63279 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 63338
|| || || ||| ||| | | |||| ||| | | |||||||| ||||| |||||
Sbjct 45886 TCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCT 45827
Query 63339 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63398
| ||| | || | | ||||| | |||||| || || ||||| | |||||| || |||
Sbjct 45826 AGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACGTATCTGGCAGTG 45767
Query 63399 TTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATA 63458
|| || ||||||| | ||| || || | ||| || || ||||||||||||| | ||
Sbjct 45766 TTGTTGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGCAATG 45707
Query 63459 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63518
|| ||| ||| | || || ||| || ||| || || || || | |||||
Sbjct 45706 TAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTTAGAA 45647
Query 63519 ATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTA 63578
||| || ||| ||||| || ||||||||||| || || |||||| |||| |
Sbjct 45646 ATTTGAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAA 45587
Query 63579 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 63638
| || ||||| ||||||||| | | ||| || ||||| |||| || ||||||
Sbjct 45586 ATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAA 45527
Query 63639 GCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATC 63697
|| || ||||| || ||| ||| | | ||||| || || || || || || |
Sbjct 45526 GCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTT 45467
Query 63698 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 63757
|| | || || || || || || | ||| | || || || |||||||||||||||||
Sbjct 45466 TCACCG-TGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTT 45408
Query 63758 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--T 63815
|| || ||||| ||||| ||| ||||||| || || ||||||||||||||||| |
Sbjct 45407 ACCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTT 45348
Query 63816 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC---- 63871
|||| |||| ||| | |||||| | | | |||| || | ||| ||||
Sbjct 45347 GAAA--TCTCTATCGAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTT 45290
Query 63872 -TATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACAT 63930
| || ||| | | ||||| || ||||| |||||| | ||||| |
Sbjct 45289 TTGTAAACATCATCA-----GAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGT 45235
Query 63931 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT-- 63988
||||| |||| || || || |||| | ||||| |||||| |||| |||||||| ||
Sbjct 45234 AGTTGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTAC 45175
Query 63989 TGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GG 64047
|||| ||| ||||||||||| |||| |||||||| ||||| || || || || ||
Sbjct 45174 TGAT--GGCGATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGG 45118
Query 64048 CTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTT 64107
| |||| || || | | || ||||| | || || || || | || | ||
Sbjct 45117 CACAAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGG 45058
Query 64108 GAATAACCTTCAT--AGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACA 64165
|||| ||| | | ||||| | |||||| ||||| | | | ||| ||||| ||
Sbjct 45057 AGATAA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCA 45000
Query 64166 TAATTTTCTAATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTC 64224
|||| | ||| | || || ||||||||||| ||| | ||| | ||| | ||
Sbjct 44999 TAATCTAGCAATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTC 44941
Query 64225 GTTTAATGACAAACATTTTT 64244
||||| |||||||| |||
Sbjct 44940 TTTTAACAACAAACATGTTT 44921
>seq13
Length=415809
Score = 178 bits (196), Expect = 2e-39
Identities = 571/882 (65%), Gaps = 8/882 (1%)
Strand=Plus/Plus
Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072
||||| || ||| || | ||||| || ||||| || || || | || ||||| |||
Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093
Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132
||||| || || || || ||||| ||||| | | |||| || || || |
Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 173153
Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192
|||||||| || || ||||| | |||| ||||| | ||| |||||| || | | |
Sbjct 173154 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 173213
Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAAT-TCTTGTTCAATGGATACCGCATCTGTTATAAT 33251
|||||||| || || || || |||| |||||| || || || | |||||
Sbjct 173214 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 173272
Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311
| || | | | | | ||| | | ||| || |||| | ||| || ||
Sbjct 173273 TCTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAGTGGGAGAACAATAGACAGGCAAA 173332
Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371
|| || | ||| || ||||||| || | ||||||||| || || | || |||||
Sbjct 173333 GTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCAT 173392
Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431
| || || || | ||| || || | ||| ||||| ||||| || |||| |||||
Sbjct 173393 CAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTTC 173452
Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTT 33488
|| |||||||| |||| ||||| || || | | || | | || || ||||| |
Sbjct 173453 AACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATCT 173512
Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548
|||||| || ||||| | || | ||| || |||||||| || || || | |
Sbjct 173513 AATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAAGAA 173572
Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33608
| ||||| || ||| || | || || || | || | | ||| |||| || ||
Sbjct 173573 ATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGAGTG 173632
Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668
||||||||| || || || || ||||||||||| |||| || | ||| || |||||
Sbjct 173633 AATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAACTTC 173692
Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33728
| | | || ||| |||| |||||||| || || || ||| || ||||| || ||
Sbjct 173693 AGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAAAGC 173752
Query 33729 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGAT 33785
||| || | || ||| || |||| | | | | | ||||||||||| | |
Sbjct 173753 CAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTGTAA 173812
Query 33786 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 33845
||| ||||| | ||| | |||||| | ||||| || || || || || | |||||
Sbjct 173813 ATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATAGGC 173872
Query 33846 GTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887
| ||| || || ||| |||||||| | ||| |||||
Sbjct 173873 TTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCT 173914
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622946880739560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |