Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq4 428 6e-115 seq13 178 2e-39 >seq4 Length=144043 Score = 428 bits (474), Expect = 6e-115 Identities = 1493/2300 (65%), Gaps = 79/2300 (3%) Strand=Plus/Minus Query 61995 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 62054 ||||||||||| | || || || | || || | | |||||||| || || || | | Sbjct 47191 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 47132 Query 62055 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 62112 || ||||| ||||| || ||||| |||| || || | || | || | Sbjct 47131 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATGGTTGGGGCCATG--A 47074 Query 62113 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62172 |||| || ||||| || ||| |||||| ||||| ||| || || |||||||| | | Sbjct 47073 TATGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCAGCCATATCAA 47014 Query 62173 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62231 |||| |||||||||| | |||||||| ||||||||| || || ||| || |||| ||| Sbjct 47013 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 46955 Query 62232 AGGTTTGT--ATTCT-GAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62288 | ||||| ||| | | || || ||| | || || || || ||| || | ||| Sbjct 46954 ATGTTTGGTAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 46895 Query 62289 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 62347 | ||| ||| | | || |||| | | | | | || || || | ||| |||| Sbjct 46894 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 46836 Query 62348 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACTCATTATT 62407 ||||| || ||| | || ||| || ||| || | ||||| | | ||||| | Sbjct 46835 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTA 46776 Query 62408 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62467 || |||||||| | ||| || ||||| |||||||| || |||||||| ||||| | Sbjct 46775 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 46716 Query 62468 ACCGTATGTTCTGATTTTATCTTTTAGAGGTTC---CCAATTCCA-AAGATCCGACGGTA 62523 ||||| | || ||| | || | ||| ||||| ||| ||| | | || Sbjct 46715 ACCGTGCTTGGCAATCTTAGCCTTCAA---TTCAGTCCAATCCCATAAGGTA-GTTGGAG 46660 Query 62524 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62583 |||| ||||| || ||| | | || || ||| | || | | Sbjct 46659 CAACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAG 46600 Query 62584 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62643 | || | |||||| | ||||||| |||| || || || ||| ||| |||||||| Sbjct 46599 CATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGG 46540 Query 62644 TTTCGAAGATCTTCTTATTTAGATCTTGTGCTTC--CAGGCTATCAAATGGATAATTTAA 62701 ||||||| || | | || | || | |||| ||| ||| |||||| |||| Sbjct 46539 TTTCGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGA--ATCGAATGGAACTCTTAA 46482 Query 62702 GAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62761 | ||||| | || || || ||||||||||| | | |||||||| |||||| | || Sbjct 46481 CATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTT 46422 Query 62762 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 62821 || || ||| | || ||| ||||| || | || |||| || | | |||| Sbjct 46421 GGATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCT 46363 Query 62822 GA-CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA----------------- 62863 | |||| || || || || | ||||| || ||| | Sbjct 46362 TAGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCATAAGTTTGAGTCTTTTGAT 46303 Query 62864 --TCGCCCATCTATTACAAACA-TGTTCAAGGCAACAGATGCCAGATTACAAACGGCTAC 62920 ||| | || ||||||| || | ||||||||||| || | |||||||| || Sbjct 46302 CTTCGGAGACCT-TTACAAAGGCTGGT-AAGGCAACAGAAGCTAAGTTACAAACAGCAGT 46245 Query 62921 CTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCC 62980 || ||| |||| | |||| | || ||| || | ||| | | || || || || Sbjct 46244 TTCCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACC 46185 Query 62981 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 63040 || || | ||||||| ||||| ||||| |||||||| |||| |||||| |||||||| Sbjct 46184 CAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACC 46125 Query 63041 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 63100 |||||| | || | ||||| || || | ||| | | ||||||| || | ||| Sbjct 46124 AGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTC--TTT 46067 Query 63101 GTATCTC--CTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63158 || ||| | |||| ||||||| | ||| | ||| || || || || || || Sbjct 46066 CTACCTCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCATCACCATAAGCA 46007 Query 63159 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63218 | ||| |||||| |||| ||| | | || | ||| || || | |||| ||| Sbjct 46006 TCACTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACT 45947 Query 63219 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 63278 | ||||| || | ||||||||||| | |||| |||| |||||| | ||| ||| Sbjct 45946 CTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCT 45887 Query 63279 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 63338 || || || ||| ||| | | |||| ||| | | |||||||| ||||| ||||| Sbjct 45886 TCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCT 45827 Query 63339 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63398 | ||| | || | | ||||| | |||||| || || ||||| | |||||| || ||| Sbjct 45826 AGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACGTATCTGGCAGTG 45767 Query 63399 TTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATA 63458 || || ||||||| | ||| || || | ||| || || ||||||||||||| | || Sbjct 45766 TTGTTGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGCAATG 45707 Query 63459 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63518 || ||| ||| | || || ||| || ||| || || || || | ||||| Sbjct 45706 TAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTTAGAA 45647 Query 63519 ATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTA 63578 ||| || ||| ||||| || ||||||||||| || || |||||| |||| | Sbjct 45646 ATTTGAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAA 45587 Query 63579 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 63638 | || ||||| ||||||||| | | ||| || ||||| |||| || |||||| Sbjct 45586 ATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAA 45527 Query 63639 GCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATC 63697 || || ||||| || ||| ||| | | ||||| || || || || || || | Sbjct 45526 GCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTT 45467 Query 63698 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 63757 || | || || || || || || | ||| | || || || ||||||||||||||||| Sbjct 45466 TCACCG-TGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTT 45408 Query 63758 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--T 63815 || || ||||| ||||| ||| ||||||| || || ||||||||||||||||| | Sbjct 45407 ACCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTT 45348 Query 63816 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAAC---- 63871 |||| |||| ||| | |||||| | | | |||| || | ||| |||| Sbjct 45347 GAAA--TCTCTATCGAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTT 45290 Query 63872 -TATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACAT 63930 | || ||| | | ||||| || ||||| |||||| | ||||| | Sbjct 45289 TTGTAAACATCATCA-----GAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGT 45235 Query 63931 AGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATT-- 63988 ||||| |||| || || || |||| | ||||| |||||| |||| |||||||| || Sbjct 45234 AGTTGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTAC 45175 Query 63989 TGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GG 64047 |||| ||| ||||||||||| |||| |||||||| ||||| || || || || || Sbjct 45174 TGAT--GGCGATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGG 45118 Query 64048 CTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTT 64107 | |||| || || | | || ||||| | || || || || | || | || Sbjct 45117 CACAAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGG 45058 Query 64108 GAATAACCTTCAT--AGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAACA 64165 |||| ||| | | ||||| | |||||| ||||| | | | ||| ||||| || Sbjct 45057 AGATAA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCA 45000 Query 64166 TAATTTTCTAATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTC 64224 |||| | ||| | || || ||||||||||| ||| | ||| | ||| | || Sbjct 44999 TAATCTAGCAATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTC 44941 Query 64225 GTTTAATGACAAACATTTTT 64244 ||||| |||||||| ||| Sbjct 44940 TTTTAACAACAAACATGTTT 44921 >seq13 Length=415809 Score = 178 bits (196), Expect = 2e-39 Identities = 571/882 (65%), Gaps = 8/882 (1%) Strand=Plus/Plus Query 33013 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTT 33072 ||||| || ||| || | ||||| || ||||| || || || | || ||||| ||| Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093 Query 33073 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 33132 ||||| || || || || ||||| ||||| | | |||| || || || | Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 173153 Query 33133 AATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 33192 |||||||| || || ||||| | |||| ||||| | ||| |||||| || | | | Sbjct 173154 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 173213 Query 33193 TTAACTGGAAGAGCCGCAGTAAGAAAT-TCTTGTTCAATGGATACCGCATCTGTTATAAT 33251 |||||||| || || || || |||| |||||| || || || | ||||| Sbjct 173214 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 173272 Query 33252 AGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 33311 | || | | | | | ||| | | ||| || |||| | ||| || || Sbjct 173273 TCTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAGTGGGAGAACAATAGACAGGCAAA 173332 Query 33312 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 33371 || || | ||| || ||||||| || | ||||||||| || || | || ||||| Sbjct 173333 GTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCAT 173392 Query 33372 TAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTC 33431 | || || || | ||| || || | ||| ||||| ||||| || |||| ||||| Sbjct 173393 CAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTTC 173452 Query 33432 TACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCACTT 33488 || |||||||| |||| ||||| || || | | || | | || || ||||| | Sbjct 173453 AACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATCT 173512 Query 33489 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 33548 |||||| || ||||| | || | ||| || |||||||| || || || | | Sbjct 173513 AATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAAGAA 173572 Query 33549 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 33608 | ||||| || ||| || | || || || | || | | ||| |||| || || Sbjct 173573 ATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGAGTG 173632 Query 33609 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC 33668 ||||||||| || || || || ||||||||||| |||| || | ||| || ||||| Sbjct 173633 AATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAACTTC 173692 Query 33669 TGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 33728 | | | || ||| |||| |||||||| || || || ||| || ||||| || || Sbjct 173693 AGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAAAGC 173752 Query 33729 CAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTGAT 33785 ||| || | || ||| || |||| | | | | | ||||||||||| | | Sbjct 173753 CAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTGTAA 173812 Query 33786 ATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACAT 33845 ||| ||||| | ||| | |||||| | ||||| || || || || || | ||||| Sbjct 173813 ATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTATAGGC 173872 Query 33846 GTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 | ||| || || ||| |||||||| | ||| ||||| Sbjct 173873 TTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCT 173914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946880739560