Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq1 107 2e-18
seq18 87.8 2e-12
>seq1
Length=1362551
Score = 107 bits (118), Expect = 2e-18
Identities = 165/233 (71%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 26764 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAAT 26823
||||||||||| | || |||||||| ||||||| || | || || | || | ||||
Sbjct 277607 ACAAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAAT 277548
Query 26824 CAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCG 26883
| || | ||||| | || || || || ||||||||||| || || || |
Sbjct 277547 CTTCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTG 277488
Query 26884 ATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GAC 26942
||||||||||| | || | || || || ||| | ||||||| ||||| | | | | |||
Sbjct 277487 ATCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAA-CTTTATCTGAC 277429
Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| ||||||||||||||||| ||| | || | ||| | ||| | ||||| ||
Sbjct 277428 TACAACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGG 277376
>seq18
Length=128875
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
||||| || || ||||| || || | ||||| | ||| | ||||| || || ||
Sbjct 90817 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 90876
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| ||||| ||||| ||||| ||||| || || || |||||||||||| |
Sbjct 90877 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 90936
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || |||||| | ||||| | ||||| | | || || ||||| ||||||
Sbjct 90937 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 90996
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||| | || | || || ||| | ||||| ||
Sbjct 90997 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 91034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478662154685520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |