Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq13 149 2e-30 seq4 149 2e-30 seq1 95.1 3e-14 >seq13 Length=415809 Score = 149 bits (164), Expect = 2e-30 Identities = 481/738 (65%), Gaps = 14/738 (2%) Strand=Plus/Minus Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278 || ||||||||| | | || ||||| || ||| || | || ||||| | || Sbjct 173752 GCTTTCTTTGCTGCTTCTGATGGTATTGTCAATGAAAACTTGGTTGAAAATTTCTCTGCT 173693 Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338 ||| ||||| ||||| || | |||||||| ||| | ||||| ||||| ||||| || Sbjct 173692 GAAGTTCAAATTCCAGAAGCTAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATT 173633 Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAACGA 22398 ||| | ||||| |||||| | | || | || | | | ||| | | ||| || || Sbjct 173632 CACTCTGAAACTTATTCTTTATTATTAGACACATACATCAAGGATCCAAAGGAA-AATGA 173574 Query 22399 AA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCT 22457 |||||| ||| || || |||| ||||||| | ||||| || ||||| | Sbjct 173573 TTTCTTATTAAACGCTATAGAAACTATTCCTGAAATTAAGGAAAAGGCTGAATGGGCTAT 173514 Query 22458 GAAATGGATGAACAATGA--ACG-TTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGT 22514 | |||||| | || | ||| || || || ||| | || |||| ||||||| || Sbjct 173513 TAGATGGATTCAAGATAAGGACGCTTTGTTTGCTGAAAGACTGGTTGCTTTTGCTGCTGT 173454 Query 22515 TGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAAT 22574 |||||| | || || ||||| ||||| ||| ||||| ||| | || ||| | | Sbjct 173453 TGAAGGTGTCTTTTTCTCTGGTTCATTTGCTGCTATCTTCTGGTTGAAGAAAAAGGGTTT 173394 Query 22575 TATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGA 22634 ||||| ||| | || || || || || || || | ||||||| ||| | ||||| || Sbjct 173393 GATGCCTGGTTTGACTTTCTCCAACGAATTGATCTGTAGAGATGAAGGTTTACATACTGA 173334 Query 22635 TTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATGAAACTGTACT 22694 ||||| ||| | | | || | || | | |||| || || || | | Sbjct 173333 CTTTGCCTGTCTATTGT-TCTCCCACTTA--AAGAACAAAC---CAGATCCAAAGATCAT 173280 Query 22695 TGATA---TTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGTTACC 22751 ||| | ||||| | | || |||||| ||||| || || || || | || Sbjct 173279 TGAAAGAATTATTGCTGAAGCTGTTGAAATTGAAAAGAGATACTTTGTTGATGCCATTCC 173220 Query 22752 AGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAGA 22811 ||| | ||||||| ||||| || ||||| |||| || |||||||||| || Sbjct 173219 AGTTGCATTACTTGGTATGAATGCTGATCTAATGAACCAATATGTTGAATTTGTTGCTGA 173160 Query 22812 TCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAATG 22871 | | ||||| || | | ||| | | ||||| | || ||| || ||||| || | Sbjct 173159 TAGATTATTAGTTGCCTTAGGTAACGAAAAGCTGTTCAATGTCACCAACCCATTCGACTT 173100 Query 22872 GATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATA 22931 |||||| || || | | || |||||||||||||| ||||| |||||| ||| || Sbjct 173099 TATGGAAAACATATCCTTAGCTGGTAAGACCAATTTCTTTGAAAAGAGAGTTTCTGATTA 173040 Query 22932 CCAAAAAGCAGGTGTTAT 22949 ||||| || |||||||| Sbjct 173039 TCAAAAGGCTGGTGTTAT 173022 >seq4 Length=144043 Score = 149 bits (164), Expect = 2e-30 Identities = 611/945 (65%), Gaps = 19/945 (2%) Strand=Plus/Plus Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446 |||||| || | ||||| |||| | ||| ||| ||| ||||||||| | || || Sbjct 45357 TATTTT-GGTTTCAAGACATTGGAAAGATCATACTTATTGAAGATCAATGGTAAGATCGT 45415 Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506 |||| | || || ||| || | ||| | |||||| |||||||||| | | |||| Sbjct 45416 TGAAAGACCACAACATTTGATTATGAGAGTTGCTGTTGGTATCCACGGTGAAAACATTGA 45475 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC---ACGCACGCCACGCC 363563 | || ||||| || || ||| | || ||| || | || || || | || Sbjct 45476 AAAAGTCATCGAAACTTACAA-CTTG-ATGT-CTCAAAGATACTTTACCCATGCTTCTCC 45532 Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT-CTAAAAA 363622 |||| | | ||||||||| |||| | || || ||||||||||| |||||| | | Sbjct 45533 AACACTATTCAATGCTGGTACTCCAAGACCTCAAATGTCTTCTTG-TTTCTTAATTTCTA 45591 Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682 ||||||| ||||| || || ||||||| ||| || | ||| | ||||||| ||||| | Sbjct 45592 TGAAGGATGATTCTATTGACGGTATCTATGATACCTTAAAGGAATGTGCTCAAATTTCTA 45651 Query 363683 AGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATT 363741 ||| ||| || || |||||| || || ||||| | | | ||| | | ||||||| Sbjct 45652 AGACTGCCGGTGGTATTGGTTTACACATTCACAACATCAGATCCACTG-GCTCTTACATT 45710 Query 363742 CGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800 || || || ||| || ||||| || | || ||| || | || || |||| || Sbjct 45711 GCTGGTACCAATGG-TACTTCCAATGGTTTGATACCTATGGTTAGAGTTTTCAACAACAC 45769 Query 363801 TGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858 ||| || ||||| || || ||||| | |||| | || || |||||| |||| || Sbjct 45770 TGCCAGATACGTTGATCAAGGTGGTAACAAAAGACC--TGGTGCCTTTGCTCTGTACCTA 45827 Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGA 363917 || || || | ||||| ||||| || | || || | ||||| ||| || || || Sbjct 45828 GAACCATGGCACTCTGATATCTTTGATTTCATCGACATCAGAAAAAATCAC-GGTAAGGA 45886 Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCG 363977 ||| | | || | ||| | ||| || | ||| || ||||| || |||||| | Sbjct 45887 AGAAATCAGAGCTAGAGATTTATTCCCAGCTTTATGGATTCCTGACTTGTTCATGAAGAG 45946 Query 363978 CGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037 || ||||| | ||||| | | || | || ||| ||| ||| | || Sbjct 45947 AGTCAAGGCAAATGGTGATTGGACTTTATTCTCTCCTAGTGAAGCTCCTGGTTTGAGTGA 46006 Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097 || | ||||| |||| || ||||| || | || |||| || || | | | | Sbjct 46007 TGCTTATGGTGATGACTTTGAAAAGCTATATGACCAATACGAATTAGAAGGTAGAGGTAG 46066 Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157 ||||| || || || ||| |||||| |||||| | || | || | || || || Sbjct 46067 AAAGACCATCAAGGCTCAAAAGTTATGGTACGCCATCTTAGAAGCCCAAACCGAAACTGG 46126 Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217 || || | || | ||||| ||| | || || || || || || || || | || Sbjct 46127 TACTCCTTTCATTGTTTACAAGGATGCTTGTAATAAAAAATCTAATCAAAAGAACTTGGG 46186 Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277 ||||||| | ||| ||||| || ||| |||||||| | | | | || || Sbjct 46187 TACAATTAAATCTTCTAACTTATGTTGTGAAATTGTTGAATACTCAGATGATAAGGAAAC 46246 Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA 364322 ||| || |||||| | || || | || | || || |||||||| Sbjct 46247 TGCTGTTTGTAACTTAGCTTCTGTTGCCTTACCAGCCTTTGTAAA 46291 >seq1 Length=1362551 Score = 95.1 bits (104), Expect = 3e-14 Identities = 137/190 (72%), Gaps = 4/190 (2%) Strand=Plus/Plus Query 111354 ATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATG-CAAATGAACTTGCAGC 111412 ||| | | ||||||||| |||||| || ||| ||| ||| |||| || | || Sbjct 1128350 ATTATAGTAGAACTTCTTTGGTTTGTTAAGGGAGATACCAATAACAAA--AATCTACAAA 1128407 Query 111413 AAAAAAT-GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTC 111471 || || || |||||||||||||| ||||| || ||||| | |||||||| |||| Sbjct 1128408 AAGAAGGCGTCAAAATTTGGGATGGTAATGGTTCTCGTGAATACCTAGATTCTCTTGGGT 1128467 Query 111472 TTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTG 111531 | |||| |||||||||||| | || || ||||| || || |||||| | || |||| Sbjct 1128468 TAACTGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTG 1128527 Query 111532 GTGCAGACTA 111541 |||| || || Sbjct 1128528 GTGCTGAATA 1128537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352915332062