Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq13 149 2e-30
seq4 149 2e-30
seq1 95.1 3e-14
>seq13
Length=415809
Score = 149 bits (164), Expect = 2e-30
Identities = 481/738 (65%), Gaps = 14/738 (2%)
Strand=Plus/Minus
Query 22219 GCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTGCATCT 22278
|| ||||||||| | | || ||||| || ||| || | || ||||| | ||
Sbjct 173752 GCTTTCTTTGCTGCTTCTGATGGTATTGTCAATGAAAACTTGGTTGAAAATTTCTCTGCT 173693
Query 22279 GAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTT 22338
||| ||||| ||||| || | |||||||| ||| | ||||| ||||| ||||| ||
Sbjct 173692 GAAGTTCAAATTCCAGAAGCTAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATT 173633
Query 22339 CACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAACGA 22398
||| | ||||| |||||| | | || | || | | | ||| | | ||| || ||
Sbjct 173632 CACTCTGAAACTTATTCTTTATTATTAGACACATACATCAAGGATCCAAAGGAA-AATGA 173574
Query 22399 AA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCT 22457
|||||| ||| || || |||| ||||||| | ||||| || ||||| |
Sbjct 173573 TTTCTTATTAAACGCTATAGAAACTATTCCTGAAATTAAGGAAAAGGCTGAATGGGCTAT 173514
Query 22458 GAAATGGATGAACAATGA--ACG-TTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGT 22514
| |||||| | || | ||| || || || ||| | || |||| ||||||| ||
Sbjct 173513 TAGATGGATTCAAGATAAGGACGCTTTGTTTGCTGAAAGACTGGTTGCTTTTGCTGCTGT 173454
Query 22515 TGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAAT 22574
|||||| | || || ||||| ||||| ||| ||||| ||| | || ||| | |
Sbjct 173453 TGAAGGTGTCTTTTTCTCTGGTTCATTTGCTGCTATCTTCTGGTTGAAGAAAAAGGGTTT 173394
Query 22575 TATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGA 22634
||||| ||| | || || || || || || || | ||||||| ||| | ||||| ||
Sbjct 173393 GATGCCTGGTTTGACTTTCTCCAACGAATTGATCTGTAGAGATGAAGGTTTACATACTGA 173334
Query 22635 TTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATGAAACTGTACT 22694
||||| ||| | | | || | || | | |||| || || || | |
Sbjct 173333 CTTTGCCTGTCTATTGT-TCTCCCACTTA--AAGAACAAAC---CAGATCCAAAGATCAT 173280
Query 22695 TGATA---TTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCGTTACC 22751
||| | ||||| | | || |||||| ||||| || || || || | ||
Sbjct 173279 TGAAAGAATTATTGCTGAAGCTGTTGAAATTGAAAAGAGATACTTTGTTGATGCCATTCC 173220
Query 22752 AGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAGA 22811
||| | ||||||| ||||| || ||||| |||| || |||||||||| ||
Sbjct 173219 AGTTGCATTACTTGGTATGAATGCTGATCTAATGAACCAATATGTTGAATTTGTTGCTGA 173160
Query 22812 TCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATTTGAATG 22871
| | ||||| || | | ||| | | ||||| | || ||| || ||||| || |
Sbjct 173159 TAGATTATTAGTTGCCTTAGGTAACGAAAAGCTGTTCAATGTCACCAACCCATTCGACTT 173100
Query 22872 GATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATA 22931
|||||| || || | | || |||||||||||||| ||||| |||||| ||| ||
Sbjct 173099 TATGGAAAACATATCCTTAGCTGGTAAGACCAATTTCTTTGAAAAGAGAGTTTCTGATTA 173040
Query 22932 CCAAAAAGCAGGTGTTAT 22949
||||| || ||||||||
Sbjct 173039 TCAAAAGGCTGGTGTTAT 173022
>seq4
Length=144043
Score = 149 bits (164), Expect = 2e-30
Identities = 611/945 (65%), Gaps = 19/945 (2%)
Strand=Plus/Plus
Query 363387 TATTTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGT 363446
|||||| || | ||||| |||| | ||| ||| ||| ||||||||| | || ||
Sbjct 45357 TATTTT-GGTTTCAAGACATTGGAAAGATCATACTTATTGAAGATCAATGGTAAGATCGT 45415
Query 363447 TGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGA 363506
|||| | || || ||| || | ||| | |||||| |||||||||| | | ||||
Sbjct 45416 TGAAAGACCACAACATTTGATTATGAGAGTTGCTGTTGGTATCCACGGTGAAAACATTGA 45475
Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC---ACGCACGCCACGCC 363563
| || ||||| || || ||| | || ||| || | || || || | ||
Sbjct 45476 AAAAGTCATCGAAACTTACAA-CTTG-ATGT-CTCAAAGATACTTTACCCATGCTTCTCC 45532
Query 363564 AACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTT-CTAAAAA 363622
|||| | | ||||||||| |||| | || || ||||||||||| |||||| | |
Sbjct 45533 AACACTATTCAATGCTGGTACTCCAAGACCTCAAATGTCTTCTTG-TTTCTTAATTTCTA 45591
Query 363623 TGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCA 363682
||||||| ||||| || || ||||||| ||| || | ||| | ||||||| ||||| |
Sbjct 45592 TGAAGGATGATTCTATTGACGGTATCTATGATACCTTAAAGGAATGTGCTCAAATTTCTA 45651
Query 363683 AGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCACAGAACAGTTACATT 363741
||| ||| || || |||||| || || ||||| | | | ||| | | |||||||
Sbjct 45652 AGACTGCCGGTGGTATTGGTTTACACATTCACAACATCAGATCCACTG-GCTCTTACATT 45710
Query 363742 CGCGGCACAGGGGGATAC-TCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATAC 363800
|| || || ||| || ||||| || | || ||| || | || || |||| ||
Sbjct 45711 GCTGGTACCAATGG-TACTTCCAATGGTTTGATACCTATGGTTAGAGTTTTCAACAACAC 45769
Query 363801 TGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTC 363858
||| || ||||| || || ||||| | |||| | || || |||||| |||| ||
Sbjct 45770 TGCCAGATACGTTGATCAAGGTGGTAACAAAAGACC--TGGTGCCTTTGCTCTGTACCTA 45827
Query 363859 GAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAAAGA 363917
|| || || | ||||| ||||| || | || || | ||||| ||| || || ||
Sbjct 45828 GAACCATGGCACTCTGATATCTTTGATTTCATCGACATCAGAAAAAATCAC-GGTAAGGA 45886
Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCG 363977
||| | | || | ||| | ||| || | ||| || ||||| || |||||| |
Sbjct 45887 AGAAATCAGAGCTAGAGATTTATTCCCAGCTTTATGGATTCCTGACTTGTTCATGAAGAG 45946
Query 363978 CGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGA 364037
|| ||||| | ||||| | | || | || ||| ||| ||| | ||
Sbjct 45947 AGTCAAGGCAAATGGTGATTGGACTTTATTCTCTCCTAGTGAAGCTCCTGGTTTGAGTGA 46006
Query 364038 TGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCG 364097
|| | ||||| |||| || ||||| || | || |||| || || | | | |
Sbjct 46007 TGCTTATGGTGATGACTTTGAAAAGCTATATGACCAATACGAATTAGAAGGTAGAGGTAG 46066
Query 364098 TAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGG 364157
||||| || || || ||| |||||| |||||| | || | || | || || ||
Sbjct 46067 AAAGACCATCAAGGCTCAAAAGTTATGGTACGCCATCTTAGAAGCCCAAACCGAAACTGG 46126
Query 364158 AACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGG 364217
|| || | || | ||||| ||| | || || || || || || || || | ||
Sbjct 46127 TACTCCTTTCATTGTTTACAAGGATGCTTGTAATAAAAAATCTAATCAAAAGAACTTGGG 46186
Query 364218 TACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGAC 364277
||||||| | ||| ||||| || ||| |||||||| | | | | || ||
Sbjct 46187 TACAATTAAATCTTCTAACTTATGTTGTGAAATTGTTGAATACTCAGATGATAAGGAAAC 46246
Query 364278 TGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAA 364322
||| || |||||| | || || | || | || || ||||||||
Sbjct 46247 TGCTGTTTGTAACTTAGCTTCTGTTGCCTTACCAGCCTTTGTAAA 46291
>seq1
Length=1362551
Score = 95.1 bits (104), Expect = 3e-14
Identities = 137/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Plus
Query 111354 ATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATG-CAAATGAACTTGCAGC 111412
||| | | ||||||||| |||||| || ||| ||| ||| |||| || | ||
Sbjct 1128350 ATTATAGTAGAACTTCTTTGGTTTGTTAAGGGAGATACCAATAACAAA--AATCTACAAA 1128407
Query 111413 AAAAAAT-GTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTC 111471
|| || || |||||||||||||| ||||| || ||||| | |||||||| ||||
Sbjct 1128408 AAGAAGGCGTCAAAATTTGGGATGGTAATGGTTCTCGTGAATACCTAGATTCTCTTGGGT 1128467
Query 111472 TTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTG 111531
| |||| |||||||||||| | || || ||||| || || |||||| | || ||||
Sbjct 1128468 TAACTGACAGAGAAGAAGGTGATTTAGGTCCTGTTTATGGTTTCCAATGGAGACATTTTG 1128527
Query 111532 GTGCAGACTA 111541
|||| || ||
Sbjct 1128528 GTGCTGAATA 1128537
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303352915332062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |