Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 3e-21
seq13 96.9 3e-15
seq18 87.8 2e-12
>seq1
Length=1362551
Score = 116 bits (128), Expect = 3e-21
Identities = 167/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 23986 ACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGG 24045
||||||||||| | || |||||||| ||||||| || | ||||| | || |||||
Sbjct 277607 ACAAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAAT 277548
Query 24046 CCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCG 24105
| || | ||||| | || || || || ||||||||||| || || || |
Sbjct 277547 CTTCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTG 277488
Query 24106 ATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GAT 24164
||||||| ||| | || | || || |||||| | ||||||| |||| | | | | ||
Sbjct 277487 ATCAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAA-CTTTATCTGAC 277429
Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|| ||||||||||||||||| || | || ||||| |||||||| ||||| ||
Sbjct 277428 TACAACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGG 277376
>seq13
Length=415809
Score = 96.9 bits (106), Expect = 3e-15
Identities = 129/176 (73%), Gaps = 10/176 (6%)
Strand=Plus/Plus
Query 104879 AATAGAGGCAGGCAAAGTCTGTGTGCAATCCTTCATCTCTAGAAATAAGTTCGTTGCTGT 104938
|||||| ||||||||||| || || || |||||||||||| | || | ||||||| |
Sbjct 173319 AATAGA--CAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGA 173376
Query 104939 AAGTCAAGCCAGGTA-GAGCCCCtttttttGTGTCTTTAATATAGTAGATGGCAGCAAAA 104997
||||||| ||||| | | ||||||| |||| || || |||| ||||||||
Sbjct 173377 AAGTCAAACCAGGCATCAAACCCTTTT------TCTTCAA-CCAGAAGATAGCAGCAAAT 173429
Query 104998 CTACCGGAGAAAAAGACACCTTCGACGATGGCAAACGCGACCATGCGTTCGGCGAA 105053
||| ||||||||||||||||| || ||||| || |||| | ||| || ||
Sbjct 173430 GAACCAGAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAA 173485
>seq18
Length=128875
Score = 87.8 bits (96), Expect = 2e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24000 TTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATC 24059
||||| || || ||||| || || | || || | |||||||| | || || ||
Sbjct 90817 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 90876
Query 24060 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTG 24119
|| ||||| ||||| ||||| ||||| || || || |||||||| ||| |
Sbjct 90877 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 90936
Query 24120 ATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAA 24179
|| | | || || ||| | ||||| | |||| | | ||||| ||||| ||||||
Sbjct 90937 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 90996
Query 24180 GAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217
|||||||| | || ||||| ||||||||||||| ||
Sbjct 90997 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 91034
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429935785166355
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |