Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1 140 2e-28
seq18 89.7 3e-13
>seq1
Length=1362551
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 308770 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 308711
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 308710 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 308676
Score = 105 bits (116), Expect = 4e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
||||||||| || | || || || || | |||| || |||||||| ||||| |||||
Sbjct 277375 ACCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 277434
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
||| | | || |||||||| || || || || |||| | ||||||||| | ||
Sbjct 277435 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 277494
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||||||||| ||||| ||| ||||| | || || ||| | ||| ||
Sbjct 277495 AATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGAC 277554
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| || ||||| || ||||| || | ||||| ||||| || ||||| ||
Sbjct 277555 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 277605
Score = 89.7 bits (98), Expect = 3e-13
Identities = 65/74 (88%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAA-CTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCG 20005
|||||| |||||||||| |||| | |||||| |||| ||||||||||||||||||||||
Sbjct 306793 CTCTCTTTTCAAAGTTCCTTTCCATCTTTCCATCACTGTACTTGTTCGCTATCGGTCTCT 306734
Query 20006 CGGTAATATTTAGC 20019
|| ||||||||||
Sbjct 306733 CGCCAATATTTAGC 306720
>seq18
Length=128875
Score = 89.7 bits (98), Expect = 3e-13
Identities = 151/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||||||||| | | || || || ||||| || ||||| || |||||||||||
Sbjct 91035 ACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGA 90976
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| | |||| ||||||||||| || ||||| |||| | ||||||||| | ||
Sbjct 90975 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 90916
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||| ||||| || || ||| ||| | | ||| || || ||| ||
Sbjct 90915 AATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGAC 90856
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAA 38308
||| || || || || ||||| || ||||| || || ||
Sbjct 90855 TTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 90817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947032631071
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |