Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq4 434 1e-116 seq13 210 3e-49 >seq4 Length=144043 Score = 434 bits (480), Expect = 1e-116 Identities = 1495/2298 (65%), Gaps = 75/2298 (3%) Strand=Plus/Minus Query 61850 GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGA 61909 ||||||||||| | || || || | || || | | |||||||| || || || | | Sbjct 47191 GTGAATTGAATAGCGGCTGAGGCAGCTTGTGTTCTCAAGTAGTACATACCAGTCTTCAAA 47132 Query 61910 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATC-TGCTA 61967 || ||||| ||||| || ||||| |||| || || | || | || | Sbjct 47131 CCCTTGCTCCAACCGTAGAAGTGCATGGAAGTTAACTTACCCATGGTTGGGGCCATG--A 47074 Query 61968 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62027 |||| || ||||| || ||| |||||| ||||| ||| || || |||||||| | | Sbjct 47073 TATGAATGTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCAGCCATATCAA 47014 Query 62028 TAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62086 | || |||||||||| | |||||||| ||||||||| || || ||| || |||| ||| Sbjct 47013 TGATAGTCTTTTGTGATAATTCCCAAACAGTTTTATACAAATC-CTTCATTTCTTGAGGA 46955 Query 62087 AGGTTTGT--ATTCT-GAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62143 | ||||| ||| | | || || ||| | || || || || ||| || | ||| Sbjct 46954 ATGTTTGGTAATTGTTGGATAGAACCATTGTTAGCAATGATATTAGACTTCATGGCTTCA 46895 Query 62144 TTCCATAATTTTC-TCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTC 62202 | ||| ||| | | || |||| | | | | | || || || | ||| |||| Sbjct 46894 TCCCA-AATACCCATATCAACTAAATCCTTCAATAAGTATGGGTTGACAATTTGGTATTC 46836 Query 62203 TCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATT 62262 ||||| || ||| | || ||| || ||| || | ||||| | | | ||||| | Sbjct 46835 ACCAGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTA 46776 Query 62263 TCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAG 62322 || |||||||| | ||| || ||||| |||||||| || |||||||| ||||| | Sbjct 46775 ACCTAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAA 46716 Query 62323 ACCGTATGTTCTGATTTTATCTTTTAGAGGTTC---CCAATTCCA-AAGATCCGACGGTA 62378 ||||| | || ||| | || | ||| ||||| ||| ||| | | || Sbjct 46715 ACCGTGCTTGGCAATCTTAGCCTTCAA---TTCAGTCCAATCCCATAAGGTA-GTTGGAG 46660 Query 62379 CAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGTAT 62438 |||| ||||| || ||| | | || || ||| | || | | Sbjct 46659 CAACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAG 46600 Query 62439 CGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATGG 62498 | || | |||||| | ||||||| |||| || || || ||| ||| |||||||| Sbjct 46599 CATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGG 46540 Query 62499 TTTCGAAGATCTTCTTATTTAGATCTTGCGCTTC--CAGGCTATCAAATGGATAATTTAA 62556 ||||||| || | | || | || | |||| ||| ||| |||||| |||| Sbjct 46539 TTTCGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGA--ATCGAATGGAACTCTTAA 46482 Query 62557 GAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATT 62616 | ||||| | || || || ||||||||||| | | |||||||| |||||| | || Sbjct 46481 CATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTCATGTT 46422 Query 62617 AGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCT 62676 || || ||| | || ||| ||||| || | || |||| || | | |||| Sbjct 46421 GGATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTA-AGTTCT 46363 Query 62677 GA-CAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAA----------------- 62718 | |||| || || || || | ||||| || ||| | Sbjct 46362 TAGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCATAAGTTTGAGTCTTTTGAT 46303 Query 62719 --TCGCCCATCTATTACAAACA-TGTTCAATGCAACAGATGCCAGATTACAAACGGCTAC 62775 ||| | || ||||||| || | || |||||||| || | |||||||| || Sbjct 46302 CTTCGGAGACCT-TTACAAAGGCTGGT-AAGGCAACAGAAGCTAAGTTACAAACAGCAGT 46245 Query 62776 CTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCC 62835 || ||| |||| | |||| | || ||| || | ||| | | || || || || Sbjct 46244 TTCCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGTACC 46185 Query 62836 TAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACC 62895 || || | ||||||| ||||| ||||| |||||||| |||| |||||| |||||||| Sbjct 46184 CAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGTACC 46125 Query 62896 AGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTT 62955 |||||| | || | ||||| || || | ||| | | ||||||| || | ||| Sbjct 46124 AGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTC--TTT 46067 Query 62956 GTATCTCTT--TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACA 63013 || |||| |||| ||||||| | ||| | ||| || || || || || || Sbjct 46066 CTACCTCTACCTTCTAATTCGTATTGGTCATATAGCTTTTCAAAGTCATCACCATAAGCA 46007 Query 63014 TTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 63073 | || |||||| |||| ||| | | || | ||| || || | |||| ||| Sbjct 46006 TCACTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGACT 45947 Query 63074 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 63133 | ||||| || | ||||||||||| | |||| |||| |||||| | ||| ||| Sbjct 45946 CTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCT 45887 Query 63134 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 63193 || || || ||| ||| | | |||| ||| | | |||||||| ||||| ||||| Sbjct 45886 TCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGTTCT 45827 Query 63194 AAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63253 | ||| | || | | ||||| | |||||| || || ||||| | |||||| || ||| Sbjct 45826 AGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACGTATCTGGCAGTG 45767 Query 63254 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATA 63313 || || ||||||| | ||| || || | ||||||||| ||||||||||| || | || Sbjct 45766 TTGTTGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGCAATG 45707 Query 63314 TAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAG 63373 || ||| ||| | || || ||| || ||| || || || || | ||||| Sbjct 45706 TAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTTAGAA 45647 Query 63374 ATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTA 63433 ||| || ||| ||||| ||||||||||| || || ||| ||||||| |||| | Sbjct 45646 ATTTGAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCTTCATAGAA 45587 Query 63434 AGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAA 63493 | || ||||| ||||||||| | | ||| || ||||| |||| || |||||| Sbjct 45586 ATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAA 45527 Query 63494 GCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTAT-ATC 63552 || || ||||| || ||| ||| | | ||||| || || || || || || | Sbjct 45526 GCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTT 45467 Query 63553 CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 63612 || | || || || || || || | ||| | || || || ||||||||||||||||| Sbjct 45466 TCACCG-TGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTT 45408 Query 63613 GTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--T 63670 || || ||||| ||||| ||| ||||||| || || ||||||||||||||||| | Sbjct 45407 ACCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTT 45348 Query 63671 GAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACA 63730 |||| |||| ||| | |||||| | | | |||| || | ||| |||| Sbjct 45347 GAAA--TCTCTATCGAAGATAATAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTT 45290 Query 63731 TCCATGGTAATA-CTT--GAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAG 63787 | || || | | | ||||| || ||| | |||||| | || || ||| Sbjct 45289 T---TGTAAACATCATCAGAAATCATTGGAGACAAAACACCATTTCTTTCGTTAACGTAG 45233 Query 63788 TTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATT--TG 63845 ||| |||| || || || |||| | ||||| |||||| |||| ||||||| || || Sbjct 45232 TTGTATAAGTCTTCGATAACTTGAGAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTG 45173 Query 63846 ATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCT 63904 || ||| ||||| ||||| |||| |||||||| ||||| || || || || ||| Sbjct 45172 AT--GGCGATTCTGGCGGCAAGAACAGCATAATCAGGATGAACAGTGGT-CATGTAGGCA 45116 Query 63905 GCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGG 63964 |||| || || | | || ||||| | || || ||||| | || | || | Sbjct 45115 CAAGTTTCAGCGGCTAAGTTATCTAATTCGATGGTAGTAACACCTTCGTAGACACCGGAG 45056 Query 63965 ATAACCTTCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATA 64022 |||| ||| | | ||||| | |||||| ||||| | || | ||| ||||| |||| Sbjct 45055 ATAA--TTCTTTGGGTGATTTTGACAGGATCGATATGTTTAGCATCTAATCCATAGCATA 44998 Query 64023 ATTTTCTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGT-ATCCATTTCGT 64081 || | ||| | ||||| ||||||||||| ||| | ||| | ||| | || | Sbjct 44997 ATCTAGCAATTCTGGATGTAATTTTATCAAA-TTGAACTGGAACTTTTCTTCCGTCTCTT 44939 Query 64082 TTAATGACAAACATTTTT 64099 |||| |||||||| ||| Sbjct 44938 TTAACAACAAACATGTTT 44921 >seq13 Length=415809 Score = 210 bits (232), Expect = 3e-49 Identities = 585/887 (66%), Gaps = 18/887 (2%) Strand=Plus/Plus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 ||||| || ||| || | ||||| || ||||| || ||||| |||| ||||| ||| Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||| || |||||||| ||||| ||||| | | |||| || || || | Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 173153 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 |||||||| || |||||||| | |||| ||||| | ||| |||||| || | | | Sbjct 173154 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 173213 Query 32550 TTAACTGGAAGAGCCACAGTAAGAAAT-TCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608 |||||||| || || || || |||| |||||| || || || | ||||| Sbjct 173214 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 173272 Query 32609 AGATCTTAC--TGTTTCTTCACTC-GGTGGATACAATAAATGTTTAAACATCAAACATGC 32665 |||| | || | || || ||| | | ||| || |||| | ||| || Sbjct 173273 ---TCTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAGTGGGAGAACAATAGACAGGC 173329 Query 32666 GAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGG 32725 || || |||| ||| || ||||||| || ||||||||||| || || | || || Sbjct 173330 AAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGG 173389 Query 32726 CATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCC 32785 ||| | || || || | ||| || || | |||||||| ||||| || || | || Sbjct 173390 CATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACC 173449 Query 32786 TTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCA 32842 ||| || || ||||| |||| ||||| || || | | || | | || || ||||| Sbjct 173450 TTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCA 173509 Query 32843 CTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAG 32902 | |||||| || ||||| | || | ||| || || |||||||| || || | Sbjct 173510 TCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAA 173569 Query 32903 ATAGtttttttCATTACTATCTTTAACATATGTATC-AATCA-AAAGACTATACATTTCC 32960 | | ||||| || ||| || | ||||| || ||| | ||||| ||| |||| Sbjct 173570 GAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGA--ATAAGTTTCA 173627 Query 32961 GAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGT 33020 || ||||||||||| || ||||| || |||||||| || |||| || | ||| || Sbjct 173628 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGA 173687 Query 33021 ACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAA 33080 ||||| | | | || ||| | || |||||||| || || || ||| || ||||| Sbjct 173688 ACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAG 173747 Query 33081 AACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCA 33137 || ||||| || | || ||| || |||| | | | | | ||||||||||| Sbjct 173748 AAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCG 173807 Query 33138 TTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTA 33197 | | ||| ||||| | ||| | |||||| | ||||| || || || || || | ||| Sbjct 173808 TGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTA 173867 Query 33198 TACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244 || | ||| || || | ||| |||||| || | ||| ||||| Sbjct 173868 TAGGCTTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCT 173914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631675263600