Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 143 2e-29 seq18 136 3e-27 >seq1 Length=1362551 Score = 143 bits (158), Expect = 2e-29 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || ||||| ||| | || ||||| |||| || | || || || || || Sbjct 277603 AATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTC 277544 Query 25058 TGACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||| ||||||| || || ||| |||||| ||||||||||| ||||||||||| Sbjct 277543 TGATTCTATCGA--CAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGAT 277486 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 ||||| | | || || || || || ||||||||||||| | | ||| | || ||| Sbjct 277485 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 277426 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || ||||||||||||||||| |||| ||||| |||| ||||||| || Sbjct 277425 AACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGG 277376 >seq18 Length=128875 Score = 136 bits (150), Expect = 3e-27 Identities = 161/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 ||||| ||||| || |||||||| ||||||| | ||||| || || |||| ||||| Sbjct 90817 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 90876 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || | | ||| || ||| ||||| ||||| ||||||||||| ||||| | | Sbjct 90877 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 90936 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAA 25187 || ||||| || |||||||||||||| | | | || | |||||||| || |||||| Sbjct 90937 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 90996 Query 25188 GAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||||| || ||||| ||||| ||||| | ||||| || Sbjct 90997 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 91034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327783471415