Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq13 275 7e-69 >seq13 Length=415809 Score = 275 bits (304), Expect = 7e-69 Identities = 613/899 (68%), Gaps = 37/899 (4%) Strand=Plus/Plus Query 92791 ATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCC 92850 ||||||||| ||||| || || |||| | |||||||||||||| ||||| || | Sbjct 173022 ATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCT 173081 Query 92851 AAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATACTTTTC---ACC 92904 || ||||| | ||| || || || ||| || || | || | |||||| ||| Sbjct 173082 AAGGATAT-GTTTTCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACC 173140 Query 92905 GAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962 | ||||| |||||||||||||| |||||||| | || || ||| | |||| Sbjct 173141 TAAGGCAACT-----AATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCA 173195 Query 92963 CAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTAC 93021 |||||| || || | || || | || || ||| | ||||| || ||| | Sbjct 173196 GCATTCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTT-TCAATTTC 173254 Query 93022 AACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACGACATA 93078 ||| ||||| ||| | |||| | | | || |||| |||||| || | || Sbjct 173255 AACAGCTTCAG-CAATAATTCTTTCAATGATCT--TTGGATCTGGTTT--GTTCTT--TA 173307 Query 93079 ATTGT----ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT 93134 | || ||| || || |||||||| |||||||||||||| |||| | ||||| | Sbjct 173308 AGTGGGAGAACAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATT 173367 Query 93135 CATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAA 93194 | ||| ||| || ||||| || | || || |||||| | ||| || || | ||||| Sbjct 173368 CGTTGGAGAAAGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAA 173427 Query 93195 AACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAAT 93254 | |||||| ||||| | |||||| || || ||||| || || | | ||| ||||| Sbjct 173428 ATGAACCAGAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACA 173487 Query 93255 TTGCGGAATTACTGCTGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 ||| ||| | ||| ||||| | | |||||| || || |||| |||||| ||| Sbjct 173488 AAGCGTCCTTA-TCTTGAATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGA 173546 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCG 93373 | ||||| |||||||| |||| | |||| || | | ||| |||||||| || Sbjct 173547 ATAGTTTCTATAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCT 173606 Query 93374 ATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAA 93433 | ||| | |||||| ||||||| || | || ||||| ||||||||| ||||||||| Sbjct 173607 AATAATAAAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAA 173666 Query 93434 CATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACT 93493 || ||||||| | || || ||||| ||| || | || || | ||||||||||| Sbjct 173667 CACTTAGCTTCTGGAATTTGAACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACA 173726 Query 93494 ATACCATCGGATGCTGCaaaaaaaGCCAATA--TATGCTTTATAAAATGTTTC-TCATCA 93550 |||||||| || || ||||| |||||||| | || | ||||| |||| | ||| Sbjct 173727 ATACCATCAGAAGCAGCAAAGAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCA 173786 Query 93551 -TCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCA 93609 || || | |||| ||||||| || ||| || || | ||||| |||||| | ||||| Sbjct 173787 TTCATTCTG-TTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCA 173845 Query 93610 AAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATA 93668 || || ||||| ||| | || || ||||| || ||| | ||| |||||| |||| Sbjct 173846 GAAAGAAGCTTCGGCTCTCTTATAGGCTTCCCAAATTTCTGGGAATTTAATTGGGAATA 173904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860514608840