Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq13 275 7e-69
>seq13
Length=415809
Score = 275 bits (304), Expect = 7e-69
Identities = 613/899 (68%), Gaps = 37/899 (4%)
Strand=Plus/Plus
Query 92791 ATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCC 92850
||||||||| ||||| || || |||| | |||||||||||||| ||||| || |
Sbjct 173022 ATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCT 173081
Query 92851 AAAGATATCGAATTCACTA--GT-GATTGGATTCTTGGCGTTATAATACTTTTC---ACC 92904
|| ||||| | ||| || || || ||| || || | || | |||||| |||
Sbjct 173082 AAGGATAT-GTTTTCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACC 173140
Query 92905 GAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCA 92962
| ||||| |||||||||||||| |||||||| | || || ||| | ||||
Sbjct 173141 TAAGGCAACT-----AATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCA 173195
Query 92963 CAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAA-TCTTTCTCGATTAC 93021
|||||| || || | || || | || || ||| | ||||| || ||| |
Sbjct 173196 GCATTCATACCAAGTAATGCAACTGGAATGGCATCAACAAAGTATCTCTTT-TCAATTTC 173254
Query 93022 AACGGCTTCTTTCAAGATTTCTATTACTCTACTATTTGG---TGGTTTTTGTACGACATA 93078
||| ||||| ||| | |||| | | | || |||| |||||| || | ||
Sbjct 173255 AACAGCTTCAG-CAATAATTCTTTCAATGATCT--TTGGATCTGGTTT--GTTCTT--TA 173307
Query 93079 ATTGT----ACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACT 93134
| || ||| || || |||||||| |||||||||||||| |||| | ||||| |
Sbjct 173308 AGTGGGAGAACAATAGACAGGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATT 173367
Query 93135 CATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAA 93194
| ||| ||| || ||||| || | || || |||||| | ||| || || | |||||
Sbjct 173368 CGTTGGAGAAAGTCAAACCAGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAA 173427
Query 93195 AACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAAT 93254
| |||||| ||||| | |||||| || || ||||| || || | | ||| |||||
Sbjct 173428 ATGAACCAGAGAAAAAGACACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACA 173487
Query 93255 TTGCGGAATTACTGCTGA-TCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313
||| ||| | ||| ||||| | | |||||| || || |||| |||||| |||
Sbjct 173488 AAGCGTCCTTA-TCTTGAATCCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGA 173546
Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCG 93373
| ||||| |||||||| |||| | |||| || | | ||| |||||||| ||
Sbjct 173547 ATAGTTTCTATAGCGTTTAATAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCT 173606
Query 93374 ATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAA 93433
| ||| | |||||| ||||||| || | || ||||| ||||||||| |||||||||
Sbjct 173607 AATAATAAAGAATAAGTTTCAGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAA 173666
Query 93434 CATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACT 93493
|| ||||||| | || || ||||| ||| || | || || | |||||||||||
Sbjct 173667 CACTTAGCTTCTGGAATTTGAACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACA 173726
Query 93494 ATACCATCGGATGCTGCaaaaaaaGCCAATA--TATGCTTTATAAAATGTTTC-TCATCA 93550
|||||||| || || ||||| |||||||| | || | ||||| |||| | |||
Sbjct 173727 ATACCATCAGAAGCAGCAAAGAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCA 173786
Query 93551 -TCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCA 93609
|| || | |||| ||||||| || ||| || || | ||||| |||||| | |||||
Sbjct 173787 TTCATTCTG-TTATTCCAATCGTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCA 173845
Query 93610 AAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATA 93668
|| || ||||| ||| | || || ||||| || ||| | ||| |||||| ||||
Sbjct 173846 GAAAGAAGCTTCGGCTCTCTTATAGGCTTCCCAAATTTCTGGGAATTTAATTGGGAATA 173904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860514608840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |