Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq18 145 6e-30
seq1 132 4e-26
>seq18
Length=128875
Score = 145 bits (160), Expect = 6e-30
Identities = 166/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
|||||| || || ||||||||||| || ||||| | ||||| ||| | | || || |
Sbjct 90816 TTTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTAT 90875
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
|||| | |||| || || ||||||||||| ||||||||||| ||||||||| | |
Sbjct 90876 TGACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATT 90935
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| ||||| || ||||| ||||| || | ||| | || ||||||||||| |||||
Sbjct 90936 AATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAA 90995
Query 22407 AGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
|||||| || |||| |||||| | ||||| | || ||| ||
Sbjct 90996 AGAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGGTGTT 91038
>seq1
Length=1362551
Score = 132 bits (146), Expect = 4e-26
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|| ||||||||||| || |||||| |||| ||||| || | ||| | || || ||| |
Sbjct 277605 AAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 277546
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||| | | ||| || | || ||||| |||||||| || ||||||||||| |||
Sbjct 277545 TCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGAT 277486
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|||||| | | || || || || || || ||||| ||| | || | || || |||
Sbjct 277485 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 277426
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATT 22436
|||||||||||||||||||| |||| ||||| || ||||
Sbjct 277425 AACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATT 277385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419727790267165
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |