Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 1e-12 >seq13 Length=415809 Score = 89.7 bits (98), Expect = 1e-12 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 42639 ATCAAGAAGAAGGCGGACTGGGCGCTCAACTGGAT-CGAGAGTCCCGACGCAACGTTCGG 42697 || ||| | ||||| || ||||| | | ||||| | ||| | ||||| ||| | Sbjct 173539 ATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAAGA-TAAGGACGCTTTGTTTGC 173481 Query 42698 CGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTC 42757 || || ||||| || ||| | || || || || |||| ||||| || | || || | Sbjct 173480 TGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTTTTTCTCTGGTTCATTTGCTGC 173421 Query 42758 CATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCAT 42817 ||||||||| | ||| | |||| | |||||| || | || ||||| |||||| | || Sbjct 173420 TATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTTGACTTTCTCCAACGAATTGAT 173361 Query 42818 CAGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTC 42865 | | || || || || | |||| ||||||||||| || ||||||| Sbjct 173360 CTGTAGAGATGAAGGTTTACATACTGACTTTGCCTGTCTATTGTTCTC 173313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338716026160