Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq1 116 9e-21 seq18 91.5 3e-13 seq13 84.2 5e-11 >seq1 Length=1362551 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||||||||| || || ||||| | | || | || ||||||||||| || || ||||| Sbjct 277411 TTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAA 277470 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | |||||| | ||| || |||||||| || |||||||| || || || || Sbjct 277471 GATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGGATTTTAGCCTTAACATT 277530 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||||||| ||||| || || | || || ||||| || || ||||| || || Sbjct 277531 GTCGATAGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTAC 277590 Query 288462 GAATATCTGCATTATGT 288478 ||| || |||||| ||| Sbjct 277591 GAAAATTTGCATTTTGT 277607 >seq18 Length=128875 Score = 91.5 bits (100), Expect = 3e-13 Identities = 130/183 (71%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 |||||||||||| || || || | | || | ||||||||||||||||| || || || Sbjct 90999 TTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 90940 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| | | |||||| | ||| || ||||| || || ||||| || || || || Sbjct 90939 GATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGC 90880 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || |||| || ||||| ||||| | ||||| ||||| ||||| | |||||||| Sbjct 90879 GTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGAC 90820 Query 288462 GAA 288464 || Sbjct 90819 AAA 90817 >seq13 Length=415809 Score = 84.2 bits (92), Expect = 5e-11 Identities = 157/227 (69%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 269115 AAAAGAGTTCATTTGT-GACGCTATCCCATGTTCTATGA-TCGGTATGAATGCCGATCTC 269172 ||||||| | ||||| || || || ||| ||| || | | ||||||||||| ||||| Sbjct 173247 AAAAGAGATACTTTGTTGATGCCATTCCA-GTTGCATTACTTGGTATGAATGCTGATCTA 173189 Query 269173 ATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAA 269232 ||||| |||||| | ||||| || |||||| | | || || | ||| | || || Sbjct 173188 ATGAACCAATATGTTGAATTTGTTGCTGATAGATTATTAGTTGCCTTAGGTAACGAAAAG 173129 Query 269233 GTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACG 269292 ||| |||| | || || |||| |||||||||| || || | | || ||||| Sbjct 173128 CTGTTCAATGTCACCAACCCATTCGACTTTATGGAAAACATATCCTTAGCTGGTAAGACC 173069 Query 269293 AACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAAT 269339 || ||||| |||||| | || || |||||| ||||||| || Sbjct 173068 AATTTCTTTGAAAAGAGAGTTTCTGATTATCAAAAGGCTGGTGTTAT 173022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653780312798