Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq1 116 9e-21
seq18 91.5 3e-13
seq13 84.2 5e-11
>seq1
Length=1362551
Score = 116 bits (128), Expect = 9e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
||||||||| || || ||||| | | || | || ||||||||||| || || |||||
Sbjct 277411 TTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAA 277470
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| | | |||||| | ||| || |||||||| || |||||||| || || || ||
Sbjct 277471 GATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGGATTTTAGCCTTAACATT 277530
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||||||| ||||| || || | || || ||||| || || ||||| || ||
Sbjct 277531 GTCGATAGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTAC 277590
Query 288462 GAATATCTGCATTATGT 288478
||| || |||||| |||
Sbjct 277591 GAAAATTTGCATTTTGT 277607
>seq18
Length=128875
Score = 91.5 bits (100), Expect = 3e-13
Identities = 130/183 (71%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341
|||||||||||| || || || | | || | ||||||||||||||||| || || ||
Sbjct 90999 TTCTTTTTGGATGTTGTAATCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAA 90940
Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401
||| | | |||||| | ||| || ||||| || || ||||| || || || ||
Sbjct 90939 GATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGC 90880
Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461
|| |||| || ||||| ||||| | ||||| ||||| ||||| | ||||||||
Sbjct 90879 GTCAATAGTTTCAGCAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGAC 90820
Query 288462 GAA 288464
||
Sbjct 90819 AAA 90817
>seq13
Length=415809
Score = 84.2 bits (92), Expect = 5e-11
Identities = 157/227 (69%), Gaps = 3/227 (1%)
Strand=Plus/Minus
Query 269115 AAAAGAGTTCATTTGT-GACGCTATCCCATGTTCTATGA-TCGGTATGAATGCCGATCTC 269172
||||||| | ||||| || || || ||| ||| || | | ||||||||||| |||||
Sbjct 173247 AAAAGAGATACTTTGTTGATGCCATTCCA-GTTGCATTACTTGGTATGAATGCTGATCTA 173189
Query 269173 ATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAA 269232
||||| |||||| | ||||| || |||||| | | || || | ||| | || ||
Sbjct 173188 ATGAACCAATATGTTGAATTTGTTGCTGATAGATTATTAGTTGCCTTAGGTAACGAAAAG 173129
Query 269233 GTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACG 269292
||| |||| | || || |||| |||||||||| || || | | || |||||
Sbjct 173128 CTGTTCAATGTCACCAACCCATTCGACTTTATGGAAAACATATCCTTAGCTGGTAAGACC 173069
Query 269293 AACTTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAAT 269339
|| ||||| |||||| | || || |||||| ||||||| ||
Sbjct 173068 AATTTCTTTGAAAAGAGAGTTTCTGATTATCAAAAGGCTGGTGTTAT 173022
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179653780312798
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |