Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 102 8e-17 seq18 95.1 1e-14 >seq1 Length=1362551 Score = 102 bits (112), Expect = 8e-17 Identities = 155/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285 ||||| | |||| || | || |||||||||||||||||||| || | | || | Sbjct 277385 AATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTA 277444 Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345 | ||||| | ||||| || || | || | | || || || || ||||| |||||| Sbjct 277445 CCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCT 277504 Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405 || ||||| ||||| ||| ||| || | | |||| | || || || | ||| Sbjct 277505 TTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTA 277564 Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 | |||||| || || | |||||||||||||||||||||||| Sbjct 277565 ATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 277605 >seq18 Length=128875 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || | |||||| || |||| || | || ||||||||||| ||||||||||| | Sbjct 91035 ACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGA 90976 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||| | ||||||| | || || || ||| | || | | || || || || || Sbjct 90975 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 90916 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| ||||| || ||||| || || ||| ||| | || | || ||| | | || || Sbjct 90915 AATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGAC 90856 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435 ||| | ||| | |||||| ||||| || || || || ||| Sbjct 90855 TTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAAA 90816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644543932040