Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 8e-17
seq18 95.1 1e-14
>seq1
Length=1362551
Score = 102 bits (112), Expect = 8e-17
Identities = 155/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 64226 AATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGC 64285
||||| | |||| || | || |||||||||||||||||||| || | | || |
Sbjct 277385 AATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTA 277444
Query 64286 GCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCT 64345
| ||||| | ||||| || || | || | | || || || || ||||| ||||||
Sbjct 277445 CCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCT 277504
Query 64346 TTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTT 64405
|| ||||| ||||| ||| ||| || | | |||| | || || || | |||
Sbjct 277505 TTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTA 277564
Query 64406 ACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
| |||||| || || | ||||||||||||||||||||||||
Sbjct 277565 ATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 277605
>seq18
Length=128875
Score = 95.1 bits (104), Expect = 1e-14
Identities = 153/220 (70%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || | |||||| || |||| || | || ||||||||||| ||||||||||| |
Sbjct 91035 ACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGA 90976
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| ||| | ||||||| | || || || ||| | || | | || || || || ||
Sbjct 90975 TAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 90916
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||| ||||| || ||||| || || ||| ||| | || | || ||| | | || ||
Sbjct 90915 AATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGAC 90856
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAA 64435
||| | ||| | |||||| ||||| || || || || |||
Sbjct 90855 TTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAAA 90816
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499644543932040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |