Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4 210 3e-49 >seq4 Length=144043 Score = 210 bits (232), Expect = 3e-49 Identities = 822/1280 (64%), Gaps = 23/1280 (2%) Strand=Plus/Minus Query 116085 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 116144 |||||| || ||||| || || || | | |||| | || |||| || || ||||| Sbjct 46631 ACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATAGGTTCCTTCAATTTCAGCTAATTC 46572 Query 116145 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT 116204 | | || || | || |||||||| || || || ||||| || |||| | |||| Sbjct 46571 AGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTTCGAAAATTTGAATGTTCAATTCCTT 46512 Query 116205 GGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGAC 116264 ||| | || ||||| || | | | ||| ||||| ||| || | |||||| || Sbjct 46511 GGCTTTTTCAGAATCGAATGGAACTCTTAACATCATAAAAGTATCAGCCAAACCTTGAAC 46452 Query 116265 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAA 116324 ||| | | |||| || | |||||||| || || ||| ||| || || || || ||| | Sbjct 46451 ACCTACGGCAATAGGTCTGTGTCTCATGTTGGATCTTCTAGCAGTTTCAACAGGGTAATA 46392 Query 116325 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 116384 || || || ||||| |||| || || | | |||||| | ||| ||||| || Sbjct 46391 GTTTCTGTCAATAACAGCGTTTAAGTTCTTAGCAATAACCTTACAAACTTCGTGAAGTTT 46332 Query 116385 TTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATAC--TTAGGAAGG--------GC 116432 || | | ||| || | |||||| || || | | || ||| |||| || Sbjct 46331 TTTGAAGTCATAAGTTTGAGTCTTTTGATCTTCGGAGACCTTTACAAAGGCTGGTAAGGC 46272 Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492 | || || | ||||| |||| || || | | ||| | ||| || | |||||| Sbjct 46271 AACAGAAGCTAAGTTACAAACAGCAGTTTCCTTATCATCTGAGTATTCAACAATTTCACA 46212 Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 116552 ||| || || ||| ||||| || ||||||||||||||||| || ||| | ||||| || Sbjct 46211 ACATAAGTTAGAAGATTTAATTGTACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGC 46152 Query 116553 ATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612 ||||||||| | || | || || || || || ||||||| | | || || | ||| Sbjct 46151 ATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCA 46092 Query 116613 T-ACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT-GTAG 116670 | || | | | || | | || | ||| || || ||||| || || || Sbjct 46091 TAACTTTTGAGCCTTG-ATGGTCTTTCTACCTCTACCTTCTAATTCGTA-TTGGTCATAT 46034 Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730 || ||||| || ||||| ||| || | || || || | | ||| |||| Sbjct 46033 AGCTTTTCAAAGTCATCACCATAAGCATCACTCAAACCAGGAGCTTCACTAGGAGAGAAT 45974 Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790 | || ||| | |||| ||| || | ||||||||| | ||| || ||||| | || Sbjct 45973 AAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAAAGCT 45914 Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850 | ||| | ||| | | | |||||| | || ||||| | | || | || Sbjct 45913 GGGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAA 45854 Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGACG 116906 || | |||||| | |||||| ||||| ||||||| || | | ||| ||| | Sbjct 45853 TCAAAGATATCAGAGTGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGTCTTTTG-TT 45795 Query 116907 ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC 116966 |||| | || | || || || || || ||| || || | || ||| || || | ||| Sbjct 45794 ACCACCTTGATCAACGTATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGTATCAAACC 45735 Query 116967 ATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTG 117026 || || ||||| || || ||| ||| ||| ||||| | ||| ||||| Sbjct 45734 ATTGGAAGTACCATTGGTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTG 45675 Query 117027 CATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGAT 117086 | ||||||||| || || ||| || ||||| || || ||| | | | | ||||| Sbjct 45674 TAAACCAATACCACCGGCAGTCTTAGAAATTTGAGCACATTCCTTTAAGGTATCATAGAT 45615 Query 117087 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGG 117146 || || || || ||| |||| | | || | ||| || |||||||| || ||||| Sbjct 45614 ACCGTCAATAGAATCATCCTTCATAGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGG 45555 Query 117147 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATC 117206 |||||||| ||||| || ||||| | || ||| | || | ||| |||||| | Sbjct 45554 AGTACCAGCATTGAATAGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTT 45495 Query 117207 GTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAA 117266 ||| || || | ||| ||||| ||| ||||| ||||| | | || | ||||| Sbjct 45494 GTAAGTTTCGATGACTTTTTCAATGTTTTCACCGTGGATACCAACAGCAACTCTCATAAT 45435 Query 117267 CATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA-ACTCTTCTCCA 117325 || | ||| ||| |||| | | |||||| || | || | ||| |||| |||| Sbjct 45434 CAAATGTTGTGGTCTTTCAACGATCTTACCATTGATCTTCAATAAGTATGATCTT-TCCA 45376 Query 117326 AGGTCTTGAGACCAAAATAG 117345 | ||||||| |||||||||| Sbjct 45375 ATGTCTTGAAACCAAAATAG 45356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613506885577560