Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq4 210 3e-49
>seq4
Length=144043
Score = 210 bits (232), Expect = 3e-49
Identities = 822/1280 (64%), Gaps = 23/1280 (2%)
Strand=Plus/Minus
Query 116085 ACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTC 116144
|||||| || ||||| || || || | | |||| | || |||| || || |||||
Sbjct 46631 ACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATAGGTTCCTTCAATTTCAGCTAATTC 46572
Query 116145 GGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTT 116204
| | || || | || |||||||| || || || ||||| || |||| | ||||
Sbjct 46571 AGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTTCGAAAATTTGAATGTTCAATTCCTT 46512
Query 116205 GGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGAC 116264
||| | || ||||| || | | | ||| ||||| ||| || | |||||| ||
Sbjct 46511 GGCTTTTTCAGAATCGAATGGAACTCTTAACATCATAAAAGTATCAGCCAAACCTTGAAC 46452
Query 116265 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAA 116324
||| | | |||| || | |||||||| || || ||| ||| || || || || ||| |
Sbjct 46451 ACCTACGGCAATAGGTCTGTGTCTCATGTTGGATCTTCTAGCAGTTTCAACAGGGTAATA 46392
Query 116325 ATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTT 116384
|| || || ||||| |||| || || | | |||||| | ||| ||||| ||
Sbjct 46391 GTTTCTGTCAATAACAGCGTTTAAGTTCTTAGCAATAACCTTACAAACTTCGTGAAGTTT 46332
Query 116385 TTCGTAATCAAAACTGCGAGTCTCTTCATTGAC--ATAC--TTAGGAAGG--------GC 116432
|| | | ||| || | |||||| || || | | || ||| |||| ||
Sbjct 46331 TTTGAAGTCATAAGTTTGAGTCTTTTGATCTTCGGAGACCTTTACAAAGGCTGGTAAGGC 46272
Query 116433 GATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGT 116492
| || || | ||||| |||| || || | | ||| | ||| || | ||||||
Sbjct 46271 AACAGAAGCTAAGTTACAAACAGCAGTTTCCTTATCATCTGAGTATTCAACAATTTCACA 46212
Query 116493 ACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 116552
||| || || ||| ||||| || ||||||||||||||||| || ||| | ||||| ||
Sbjct 46211 ACATAAGTTAGAAGATTTAATTGTACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGC 46152
Query 116553 ATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 116612
||||||||| | || | || || || || || ||||||| | | || || | |||
Sbjct 46151 ATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCA 46092
Query 116613 T-ACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT-GTAG 116670
| || | | | || | | || | ||| || || ||||| || || ||
Sbjct 46091 TAACTTTTGAGCCTTG-ATGGTCTTTCTACCTCTACCTTCTAATTCGTA-TTGGTCATAT 46034
Query 116671 AGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAG 116730
|| ||||| || ||||| ||| || | || || || | | ||| ||||
Sbjct 46033 AGCTTTTCAAAGTCATCACCATAAGCATCACTCAAACCAGGAGCTTCACTAGGAGAGAAT 45974
Query 116731 AGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790
| || ||| | |||| ||| || | ||||||||| | ||| || ||||| | ||
Sbjct 45973 AAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAAAGCT 45914
Query 116791 GAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAG 116850
| ||| | ||| | | | |||||| | || ||||| | | || | ||
Sbjct 45913 GGGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAA 45854
Query 116851 TCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCTTGCGACG 116906
|| | |||||| | |||||| ||||| ||||||| || | | ||| ||| |
Sbjct 45853 TCAAAGATATCAGAGTGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGTCTTTTG-TT 45795
Query 116907 ACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACC 116966
|||| | || | || || || || || ||| || || | || ||| || || | |||
Sbjct 45794 ACCACCTTGATCAACGTATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGTATCAAACC 45735
Query 116967 ATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCGTGGATGTG 117026
|| || ||||| || || ||| ||| ||| ||||| | ||| |||||
Sbjct 45734 ATTGGAAGTACCATTGGTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTG 45675
Query 117027 CATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGAT 117086
| ||||||||| || || ||| || ||||| || || ||| | | | | |||||
Sbjct 45674 TAAACCAATACCACCGGCAGTCTTAGAAATTTGAGCACATTCCTTTAAGGTATCATAGAT 45615
Query 117087 CCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGG 117146
|| || || || ||| |||| | | || | ||| || |||||||| || |||||
Sbjct 45614 ACCGTCAATAGAATCATCCTTCATAGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGG 45555
Query 117147 TGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATC 117206
|||||||| ||||| || ||||| | || ||| | || | ||| |||||| |
Sbjct 45554 AGTACCAGCATTGAATAGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTT 45495
Query 117207 GTAGGTCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAA 117266
||| || || | ||| ||||| ||| ||||| ||||| | | || | |||||
Sbjct 45494 GTAAGTTTCGATGACTTTTTCAATGTTTTCACCGTGGATACCAACAGCAACTCTCATAAT 45435
Query 117267 CATGTATTGGGGTGTTTCCATCAGGATACCATCGAGCCTCTGGAGGTA-ACTCTTCTCCA 117325
|| | ||| ||| |||| | | |||||| || | || | ||| |||| ||||
Sbjct 45434 CAAATGTTGTGGTCTTTCAACGATCTTACCATTGATCTTCAATAAGTATGATCTT-TCCA 45376
Query 117326 AGGTCTTGAGACCAAAATAG 117345
| ||||||| ||||||||||
Sbjct 45375 ATGTCTTGAAACCAAAATAG 45356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506885577560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |