Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1 102 2e-16 seq4 86.0 1e-11 >seq1 Length=1362551 Score = 102 bits (112), Expect = 2e-16 Identities = 156/222 (70%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||| | ||| | ||| | ||| || || ||||| | ||||||||||| ||||| || || Sbjct 277387 TCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACC 277446 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | ||||| || |||||||| | | || || || || ||| |||||| Sbjct 277447 ATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTT 277506 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || ||| || |||| | || | | ||| || ||||| || || Sbjct 277507 GTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTAAT 277566 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 |||||||| || |||||||| || |||||||| |||||| Sbjct 277567 GGTCTTACCAGTTAGAGTTTTTACGAAAATTTG---CATTTT 277605 >seq4 Length=144043 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/234 (69%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827 || |||||||| || ||||| || ||||| || | ||| || | || ||| || | Sbjct 46153 GCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTAC 46094 Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887 || | | ||| || || | ||| |||| |||| |||||| ||||||| ||||| Sbjct 46093 CATAACTTTTGAGCCTTGATGGTCTTTCTACCTCTACCTTCTAATTCGTATTGGTCATAT 46034 Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCG-TCAAGACCGGGAGCTTCCTTCGGACAAAA 167946 || | ||| || || | || ||| || |||| ||| |||||||| | ||| | || Sbjct 46033 AGCTTTTCAAAGTCATCACCATAAGCATCACTCAA-ACCAGGAGCTTCACTAGGAGAGAA 45975 Query 167947 GAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCA 168000 | | |||||| |||| | || ||| ||||||||||| | ||| | | |||| Sbjct 45974 TAAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCA 45921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920980697747