Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 2e-16
seq4 86.0 1e-11
>seq1
Length=1362551
Score = 102 bits (112), Expect = 2e-16
Identities = 156/222 (70%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||| | ||| | ||| | ||| || || ||||| | ||||||||||| ||||| || ||
Sbjct 277387 TCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACC 277446
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | ||||| || |||||||| | | || || || || ||| ||||||
Sbjct 277447 ATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTT 277506
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || || || ||| || |||| | || | | ||| || ||||| || ||
Sbjct 277507 GTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTAAT 277566
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635
|||||||| || |||||||| || |||||||| ||||||
Sbjct 277567 GGTCTTACCAGTTAGAGTTTTTACGAAAATTTG---CATTTT 277605
>seq4
Length=144043
Score = 86.0 bits (94), Expect = 1e-11
Identities = 161/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 167768 GCGTCCTTGTAGACGATGAAGGGCATACCAACCTCCGCTTGAGCCACCAAAATGTGGTGC 167827
|| |||||||| || ||||| || ||||| || | ||| || | || ||| || |
Sbjct 46153 GCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTAC 46094
Query 167828 CAAAGTTCTTGGGCTTTTACGGTAGTTCTCGCTCTTCCTTCTTTTTCGTATCTCTCATAG 167887
|| | | ||| || || | ||| |||| |||| |||||| ||||||| |||||
Sbjct 46093 CATAACTTTTGAGCCTTGATGGTCTTTCTACCTCTACCTTCTAATTCGTATTGGTCATAT 46034
Query 167888 AGGTCTTCGAAATCCTTCCCGTAAATTTCG-TCAAGACCGGGAGCTTCCTTCGGACAAAA 167946
|| | ||| || || | || ||| || |||| ||| |||||||| | ||| | ||
Sbjct 46033 AGCTTTTCAAAGTCATCACCATAAGCATCACTCAA-ACCAGGAGCTTCACTAGGAGAGAA 45975
Query 167947 GAGACTCCAATTTCCATCGGTCTCGACCCTCTTCATGAAGAGGTCGGAAGTCCA 168000
| | |||||| |||| | || ||| ||||||||||| | ||| | | ||||
Sbjct 45974 TAAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATCCA 45921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178920980697747
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |