Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq4 224 1e-53 seq7 98.7 1e-15 seq13 95.1 2e-14 >seq4 Length=144043 Score = 224 bits (248), Expect = 1e-53 Identities = 1116/1757 (64%), Gaps = 55/1757 (3%) Strand=Plus/Plus Query 111606 GAAACCCCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGAT 111665 |||| ||||| | || | ||| | || || | |||||||| || ||| | ||||| Sbjct 45417 GAAAGACCACAACATTTGATTATGAGAGTTGCTGTTGGTATCCACGGTGAAAACATTGAA 45476 Query 111666 TCTGTTTTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACC 111725 || | || || ||| || |||||| | | || | ||| || | ||||| Sbjct 45477 AAAGTCATCGAAACTTACAACTTGATGTCTCAAAGATACTTTACCCATGCTTCTCCAACA 45536 Query 111726 CTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAG 111785 || ||||| |||||||| |||||||| |||||||| ||||||| | ||| | | ||| Sbjct 45537 CTATTCAATGCTGGTACTCCAAGACCTCAAATGTCTTCTTGTTTCTTAATTTCTATGAAG 45596 Query 111786 GAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGG 111845 || ||||| || | || || || | || | | |||||||| ||||| || ||| Sbjct 45597 GATGATTCTATTGACGGTATCTATGATACCTTAAAGGAATGTGCTCAAATTTCTAAGACT 45656 Query 111846 GCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTATTAGAGGT 111905 || |||||||| || | ||||| || | ||||| ||| ||| ||| ||| Sbjct 45657 GCCGGTGGTATTGGTTTACACATTCACAACATCAGATCCACTGGCTCTTACATTGCTGGT 45716 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 || |||||| || ||||| | || || ||| || | || || ||| ||| || | Sbjct 45717 ACCAATGGTACTTCCAATGGTTTGATACCTATGGTTAGAGTTTTCAACAACACTGCCAGA 45776 Query 111966 TATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA------TCGCAGTCTATCTTGAGCCA 112019 || || | |||| ||| | ||| || || | || | || || || ||| Sbjct 45777 TACGTTGATCAAGGTGG---TAACAAAAGACCTGGTGCCTTTGCTCTGTACCTAGAACCA 45833 Query 112020 TGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCG 112079 |||||| | |||||| | || ||| | || | | || || ||| | || || Sbjct 45834 TGGCACTCTGATATCTTTGATTTCATCGACATCAGAAAAAATCACGGTAAGGAAGAAAT- 45892 Query 112080 CGGTGCC-GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGA 112138 | | || | ||| | ||| | ||| | |||||||| || | |||||||||||||| | Sbjct 45893 CAGAGCTAGAGATTTATTCCCAGCTTTATGGATTCCTGACTTGTTCATGAAGAGAGTCAA 45952 Query 112139 GGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCACCCGGTCTCTCCGATGCCG 112197 || | ||| ||||| || | || | ||| || ||| | || ||| | ||||| Sbjct 45953 GGCAAATGGTGATTGGACTTTATTCTCTCCTAGTGAAG-CTCCTGGTTTGAGTGATGCTT 46011 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTAC-ACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG 112256 ||||| || |||||| || || || || ||||| |||| || | | | | Sbjct 46012 ATGGTGATGACTTTGAAAAGCTATATGACCAA-TACGAATTAGAAGGTAGAGGTAGAAAG 46070 Query 112257 ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 || | ||| | | ||| | || || | | | |||||||| |||||||| Sbjct 46071 ACCATCAAGGCTCAAAAGTTATGGTACGCCATCTTAGAAGCCCAAACCGAAACTGGTACT 46130 Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 || | || ||||||| || || ||||| |||| |||||||||||| |||||| Sbjct 46131 CCTTTCATTGTTTACAAGGATGCTTGTAATAAAAAATCTAATCAAAAGAACTTGGGTACA 46190 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436 || || ||| ||| | ||| ||||| | |||| |||| | | || || ||| Sbjct 46191 ATTAAATCTTCTAACTTATGTTGTGAAATTGTTGAATACTCAGATGATAAGGAAACTGCT 46250 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG------------GATCCAGAG 112484 || |||||| | || || | || | || | ||| |||| | || Sbjct 46251 GTTTGTAACTTAGCTTCTGTTGCCTTACCAGCCTTTGTAAAGGTCTCCGAAGATCAAAAG 46310 Query 112485 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTA 112544 || | || | ||| | ||||||| ||||||||| || | | | || ||| || Sbjct 46311 ACTCAAACTTATGACTTCAAAAAACTTCACGAAGTTTGTAAGGTTATTGCTAAGAACTTA 46370 Query 112545 AACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGA 112604 ||| |||||||| ||||| | |||||| ||||| |||||| | | ||| || |||||| Sbjct 46371 AACGCTGTTATTGACAGAAACTATTACCCTGTTGAAACTGCTAGAAGATCCAACATGAGA 46430 Query 112605 CACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCAC 112664 ||| | || |||| | ||||| |||||| | || ||| || || | | | Sbjct 46431 CACAGACCTATTGCCGTAGGTGTTCAAGGTTTGGCTGATACTTTTATGATGTTAAGAGTT 46490 Query 112665 GCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCAC 112724 |||| ||||| || |||| |||||| | || | || || || || || |||||| Sbjct 46491 CCATTCGATTCTGAAAAAGCCAAGGAATTGAACATTCAAATTTTCGAAACCATTTATCAC 46550 Query 112725 GCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAG 112784 || ||| | || || | || || || || |||| || | |||| | | || Sbjct 46551 GCTGCTTTGGAAGCTTCCACTGAATTAGCTGAAATTGAAGGAACCTATGCTTCTTACGAA 46610 Query 112785 GGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTT 112844 |||||||||||||| ||||| || | |||| ||| | | |||| || |||| || Sbjct 46611 GGTTCTCCAGCTTCTCAAGGTGTTTTACAATACGATTTCT-GGAACGTTGCTCCAA-CTA 46668 Query 112845 CACTACGACTGGGA-CGCTCTCAA-GGAACGC----ATCAAGGAGAAGGGTCTTCGTAAC 112898 | || ||||| | || || ||| || || || | ||| | | ||| Sbjct 46669 CCTTA----TGGGATTGGACTGAATTGAAGGCTAAGATTGCCAAGCACGGTTTAAGAAAC 46724 Query 112899 AGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAA 112958 | ||| | || || |||||||| || || || | ||||| || ||| | |||||| Sbjct 46725 TCCTTATTGGTTGCTCCTATGCCAACTGCTTCTACTTCCCAAATTTTAGGTTACAATGAA 46784 Query 112959 TGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGT 113017 || |||||||| | ||| | ||||| || ||| |||||||| | | || || | Sbjct 46785 TGTTTTGAACCATTCACTTCTAACATGTACTCT-AGAAGAACTTTATCTGGTGAATACCA 46843 Query 113018 GATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATAT 113077 ||||||||| | | || | || | || || ||| | ||| | | || Sbjct 46844 AATTGTCAACCCATACTTATTGAAGGATTTAGTTGATATGGGTATTTGGGATGAAGCCAT 46903 Query 113078 GAAG---GATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGA 113134 |||| || |||| | || |||||| || ||| | | | ||||| | Sbjct 46904 GAAGTCTAATATCATTGCTAA---CAATGGTTCTATCCAACAATTACCAAACATTCCTCA 46960 Query 113135 TGAAATTAAGAAGTTGTACCGCACAGTTTGGGAA--ATCAAGATGAAGGATGTCATTGAC 113192 ||||| ||| | ||||| || ||||||||| |||| | ||| | ||||||| Sbjct 46961 AGAAATGAAGGATTTGTATAAAACTGTTTGGGAATTATCACAA--AAGACTATCATTGAT 47018 Query 113193 ATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAA 113252 ||||| || ||| | |||||||||||| ||| ||||| |||||| | Sbjct 47019 ATGGCTGCTGATAGACAAGCTTTCATTGATCAATCTCATTCCATGAA--CATTCATATCA 47076 Query 113253 AG--TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCA 113310 | ||||| ||| ||| | |||| |||||| | ||| |||||| |||||| | | Sbjct 47077 TGGCCCCAACCATGGGTAAGTTAACTTCCATGCACTTCTACGGTTGGAGCAAGGGTTTGA 47136 Query 113311 AAACGGGGATGTATTAC 113327 | || || ||||| ||| Sbjct 47137 AGACTGGTATGTACTAC 47153 >seq7 Length=316599 Score = 98.7 bits (108), Expect = 1e-15 Identities = 227/334 (68%), Gaps = 6/334 (2%) Strand=Plus/Plus Query 176734 ACCCTTGATGTGGGAACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCG 176793 ||||||||| |||||||| || | ||| ||| ||||||||||| | | ||||||| | Sbjct 64375 ACCCTTGATATGGGAACCATCATAATCTTGATCAGTCATGATCATTAAATGACCATATCT 64434 Query 176794 AAGCTCGGAAACATCTTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATC 176853 | | ||||||| ||| ||| ||||| | ||||| || ||||||| | | Sbjct 64435 TAAAGAAGTAACATCTGTATAAGTCTTTTTATGTTGTAAACCCATAATTTTCTTGATAGC 64494 Query 176854 GTTGAA-CTCTTGGTTTGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACAC- 176911 ||||| ||||| ||| ||| ||| |||| ||||| | ||||| | | || Sbjct 64495 -TTGAATTTCTTGATTTTTATTGACCTGATCAGCAGAAGCATCTCTGACATT-TAAGACT 64552 Query 176912 TTCCCACGAAGAGGGAAGACA-CCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAAC 176970 || || | | ||| | ||| ||||| | ||| | |||||| | ||| | ||| ||||| Sbjct 64553 TTACCTCTTAATGGGTA-ACATCCGTAATAATCTCTACCAACAATAGACAAACCAGCAAC 64611 Query 176971 CGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATGAGTGTACACTTGCCAGATTGTGC 177030 || | | || ||||||||||| ||||| | | | ||||| || | | | Sbjct 64612 AGCCAATGACTTGGCAGAATCACCTTCTGTTAATAGTAAAGTACATTTATGACCCTCTCT 64671 Query 177031 CGTACCCGCCTTGTTCGCATCATCCAATTTGGGA 177064 ||||| |||||||| ||||| || ||||| ||| Sbjct 64672 AGTACCGGCCTTGTTAGCATCTTCTAATTTAGGA 64705 >seq13 Length=415809 Score = 95.1 bits (104), Expect = 2e-14 Identities = 212/312 (68%), Gaps = 11/312 (4%) Strand=Plus/Plus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 |||||||| | || ||||| ||||| | ||| ||| | ||||||||| | Sbjct 402965 AAACCATCTAGTTCGACCAAAATTTGGTTTAAAGTGGCTTCTCTTTCATCATTACC---- 403020 Query 16035 ATACCACCAGCACTGCGTTGCTTTCCCAC-GGCATCAATCTCATCAATGAAGACGATGCA 16093 ||||| ||||| | | ||||| ||| |||||| || ||||||||||| | ||| | Sbjct 403021 --ACCACTAGCACCTC-TGGCTTTACCAATGGCATCGATTTCATCAATGAAAATGATACT 403077 Query 16094 TGGTTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAAC 16153 ||| ||||| | || |||||| ||||| | ||| | || |||| ||| || Sbjct 403078 TGGGGCATTTTTTCTGGCTGTTTCAAATAGATCTCTTACTCTGGAAGCACCCATACCTAC 403137 Query 16154 AAACATCTCCACAAAGTTTGCGGCGGAACATTGGAT-GAAGGGGACATTAGATTCACCCG 16212 ||||||||| ||||| | || | ||| | | || ||| || ||| | ||||| | Sbjct 403138 AAACATCTCAACAAATTCAGCACCAGAA-ACAGAATAGAATGGCACACCTGCCTCACCGG 403196 Query 16213 CAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTC 16272 || | || ||| | |||||||||||| |||||||| ||| | | | ||||||| Sbjct 403197 CAGTTGCCTTGGCCAAAAGAGTCTTACCTGTACCTGGAGGACCAGACAAAATAGCACCTC 403256 Query 16273 GTGG-AATCTTG 16283 || ||||||| Sbjct 403257 TAGGTAATCTTG 403268 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742081869520