Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq4 242 4e-59 >seq4 Length=144043 Score = 242 bits (268), Expect = 4e-59 Identities = 1080/1688 (64%), Gaps = 57/1688 (3%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 |||||| || ||||| ||||| ||||| | |||||| ||||| || |||||| Sbjct 47066 GTTCATGGAATGAGATTGATCAATGAAAGCTTGTCTATCAGCAGCCATATCAATGATAGT 47007 Query 109560 CTTTTG-GCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCA 109618 |||||| | ||||| |||| ||||| || ||||||| ||| || || | ||||||| Sbjct 47006 CTTTTGTGATAATT-CCCAAACAGTTTTATACAAATCCTTCATTTCTTGAGGAATGTTTG 46948 Query 109619 CGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATC---CTTCATCTCTTTCGACC 109675 | | ||| ||||| |||| || | |||| || |||||| ||| || Sbjct 46947 GTAATTGTTGGATAGA---ACCATTGTTAGCAATGATATTAGACTTCATGGCTTCATCCC 46891 Query 109676 AGAGACCGACCTTTTTGAGATCGT-CAACAAG-ATGCTTGTTGACCACGACAAATTCACC 109733 | | ||| | | | ||| | ||| ||| ||| |||||| | ||||||| Sbjct 46890 AAATACCCATATCAACTAAATCCTTCAATAAGTATGG--GTTGACAATTTGGTATTCACC 46833 Query 109734 AGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCC 109793 || | || | || ||| ||||||| ||| | ||||| ||||| ||||||| || Sbjct 46832 AGATAAAGTTCTTCTAGAGTACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTAACC 46773 Query 109794 TAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 || ||||| | ||| ||||| || ||||| ||||| | | | ||||| | ||| Sbjct 46772 TAAAATTTGGGAAGTAGAAGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAAACC 46713 Query 109854 ---CTTCG---TCTTTACCCGCTCACGCATTGCGTCCCAATC--ATAACGACCACTAAAT 109905 ||| | |||| || ||| ||| |||| |||| |||| | || | Sbjct 46712 GTGCTTGGCAATCTTAGCCT--TCA---ATTCAGTCC-AATCCCATAAGG-----TAGTT 46664 Query 109906 TTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTG 109965 || || | | ||| | ||| ||| | ||||| | || ||| |||||||| | | Sbjct 46663 GGAG---CAACGTTCCAGAAATCGTATTGTAAAACACCTTGAGAAGCTGGAGAACCTTCG 46607 Query 109966 AAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGA 110025 || | || | || |||| || || || || | ||||| || | || || ||| Sbjct 46606 TAAGAAGCATAGGTTCCTTCAATTTCAGCTAATTCAGTGGAAGCTTCCAAAGCAGCGTGA 46547 Query 110026 TACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGA 110085 || || || || ||||| ||| |||| | | |||| | ||||| |||| Sbjct 46546 TAAATGGTTTCGAAAATTTGAATGTTCAATTCCTTGGCTTTTTCAGAATCGAATGGAACT 46487 Query 110086 CCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTC 110145 | | | ||||| ||| || | ||| |||||||| | |||| || | || || Sbjct 46486 CTTAACATCATAAAAGTATCAGCCAAACCTTGAACACCTACGGCAATAGGTCTGTGTCTC 46427 Query 110146 ATGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACC-CGATTGAG 110204 ||||| || | || ||||||||| || |||||| |||| | ||| || || || || || Sbjct 46426 ATGTTGGATCTTCTAGCAGTTTCAACAGGGTAATAGTTTCTGTCAATAACAGCGTTTAAG 46367 Query 110205 ATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTC 110264 ||||| | | | ||| | ||| || ||||| | | | || | |||| |||| Sbjct 46366 -TTCTTAGCAATAACCTTACAAACTTCGTGAAGTTTTTTGAAGTCATAAGTTTGAGTCTT 46308 Query 110265 CTTATT----GACATATTTG--------GGGAGAGCAATAGACGCAAGATTGCACACAGA 110312 | || || | ||| || | |||| ||| || | || || |||| Sbjct 46307 TTGATCTTCGGAGACCTTTACAAAGGCTGGTAAGGCAACAGAAGCTAAGTTACAAACAGC 46248 Query 110313 AGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGAC 110372 ||| || | | || | |||||| | |||||| ||| ||||| ||| ||||| Sbjct 46247 AGTTTCCTTATCATCTGAGTATTCAACAATTTCACAACATAAGTTAGAAGATTTAATTGT 46188 Query 110373 ACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGT 110432 |||||||||||| ||||| ||||| || || |||||||| || | ||| | || || Sbjct 46187 ACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAAGGAGT 46128 Query 110433 ACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGTTGC 110492 ||||||||| || || | | | ||||| | ||||| | || || || Sbjct 46127 ACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATGGTCTT 46068 Query 110493 GTTAGCGAGACCTTCCTCCTCGTACTTGGTG-TACAAGTCCTCAAATTCCTGTCCGTACA 110551 || | |||||| ||||| ||||| || | | ||||| || | || || Sbjct 46067 TCTACCTCTACCTTCTAATTCGTA-TTGGTCATATAGCTTTTCAAAGTCATCACCATAAG 46009 Query 110552 CATCAGAAAGACCCTTCGCCTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAA 110611 ||||| | ||| || | ||| |||| | | ||||| ||| ||| | Sbjct 46008 CATCACTCAAACCAGGAGCTTCACTAGGAGAGAATAAAGTCCAATCACCATTTGCCTTGA 45949 Query 110612 CCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACG-GCAACGAGCC 110670 | ||||||||||||| |||||||||||| | || | ||| | || | || || Sbjct 45948 CTCTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTCTGATT- 45890 Query 110671 TCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGT 110730 ||||| | ||| || || | | || | || || | |||||| |||||||||||| Sbjct 45889 TCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCCATGGT 45830 Query 110731 TCGAGATAGACAGCGATGGATCC----CTTACGACGACCCGCCTGGTTAACATAGCGTGC 110786 || || || | ||| | || || ||| | ||| | || | ||| || | || Sbjct 45829 TCTAGGTACAGAGCAAAGGCACCAGGTCTTTTGTT-ACCACCTTGATCAACGTATCTGGC 45771 Query 110787 TGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCT 110846 ||| ||||| || || | |||||| || | |||| ||| |||||| ||||| Sbjct 45770 AGTGTTGTTGAAAACTCTAACCATAGGTATCAAACCATTGGAAGTACCATTGGTACCAGC 45711 Query 110847 AATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTT 110906 ||| || | ||| | |||| ||| || || | |||||||||||| || ||| Sbjct 45710 AATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCGGCAGTCTT 45651 Query 110907 ACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTT 110966 | |||||| ||||| || | | ||| |||| ||||| ||||| ||||| |||| | Sbjct 45650 AGAAATTTGAGCACATTCCTTTAAGGTATCATAGATACCGTCAATAGAATCATCCTTCAT 45591 Query 110967 GGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGG 111026 | ||||| || ||||||||||| ||||| | || || || |||||||| ||||| || Sbjct 45590 AGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTGTTGG 45531 Query 111027 TGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTAC 111086 | ||||| | || | ||| |||||| |||||| || |||| | | Sbjct 45530 AGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTTCAAT 45471 Query 111087 ATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAG 111146 | || |||||| ||||||| ||||||| ||| | || || ||| || |||| | | Sbjct 45470 GTTTTCACCGTGGATACCAACAGCAACTCTCATAATCAAATGTTGTGGTCTTTCAACGAT 45411 Query 111147 CTTTCCAT 111154 ||| |||| Sbjct 45410 CTTACCAT 45403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975698149800