Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1 161 2e-34 seq4 96.9 8e-15 >seq1 Length=1362551 Score = 161 bits (178), Expect = 2e-34 Identities = 170/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||| || || | ||| | |||||| ||||||||||| ||||| || | | ||| Sbjct 277381 TCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGT 277440 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | |||||||| |||||||| | || |||||| || || ||||| || Sbjct 277441 TCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGGAATACC 277500 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 |||||||||||| ||||| ||| || || || || | || ||| ||| || || | Sbjct 277501 TTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGACCTCCAA 277560 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 |||| ||||| || || | |||||||||||| | |||||||| Sbjct 277561 AGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTT 277604 >seq4 Length=144043 Score = 96.9 bits (106), Expect = 8e-15 Identities = 218/323 (67%), Gaps = 6/323 (2%) Strand=Plus/Plus Query 160514 TGGCACGTTGACATCTTTGACTTTGTCGA--TGCGAAAAAGCCCGGAGGTGATGACCTGA 160571 |||||| ||| |||||||| || |||| | |||||| | | || | || | Sbjct 45834 TGGCACTCTGATATCTTTGATTTCATCGACATCAGAAAAAATCACG--GTAAGGAAGAAA 45891 Query 160572 TGAGAGCCAGAGAGATTTTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGA 160631 | ||||| ||||| | ||| || | |||| | | || | |||||||||||||| | Sbjct 45892 TCAGAGCTAGAGATTTATTCCCAGCTTTATGGATTCCTGACTTGTTCATGAAGAGAGTCA 45951 Query 160632 AAGACAATGGGGATTGGAGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGA-TGATGTT 160690 | | ||||| ||||||| | |||| ||| | |||||| ||||| |||| ||||| | Sbjct 45952 AGGCAAATGGTGATTGGACTTTATTCTCTCCTAGTGAAGCTCCTGG-TTTGAGTGATGCT 46010 Query 160691 TATGGTTCCGAGTTCGAGACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAG 160750 |||||| || || || | || ||||| ||||||| ||| || |||| | |||| Sbjct 46011 TATGGTGATGACTTTGAAAAGCTATATGACCAATACGAATTAGAAGGTAGAGGTAGAAAG 46070 Query 160751 GTCGTGAAGGCCCAAGAACTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATG 160810 | | ||||| ||| | | ||| | |||| | | |||||| ||| |||| Sbjct 46071 ACCATCAAGGCTCAAAAGTTATGGTACGCCATCTTAGAAGCCCAAACCGAAACTGGTACT 46130 Query 160811 CCCTTTATCGCATACAAGGATGC 160833 || || || | ||||||||||| Sbjct 46131 CCTTTCATTGTTTACAAGGATGC 46153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481017175447