Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_015960.1
Length=175699
Score E
Sequences producing significant alignments: (Bits) Value
seq4 381 7e-101
seq13 358 7e-94
>seq4
Length=144043
Score = 381 bits (422), Expect = 7e-101
Identities = 893/1326 (67%), Gaps = 57/1326 (4%)
Strand=Plus/Minus
Query 47934 ATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTG 47993
|||||| ||||| ||| | |||| || |||||||| || | |||||| ||
Sbjct 46219 ATTTCACAACATAAGTTAGAAGATTTAATTGTACCCAAGTTCTTTTGATTAGATTTTTTA 46160
Query 47994 TTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATA 48053
||||| || |||||||||| || ||||| || |||||||| | || | ||| | |||
Sbjct 46159 TTACAAGCATCCTTGTAAACAATGAAAGGAGTACCAGTTTCGGTTTGGGCTTCTAAGATG 46100
Query 48054 GATTTCCAAACAGTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCATGTTCGTATTTA 48113
| | ||| | | |||||| || |||| || || || ||||||||
Sbjct 46099 GCGTACCATAACTTTTGAGCCTTGATGGTCTTTCTACCTCTACCTTCTAATTCGTATTGG 46040
Query 48114 GTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGA 48173
||||| ||| ||||| ||||| ||||| ||| | || |||||| |||| |||||
Sbjct 46039 TCATATAGCTTTTCAAAGTCATCACCATAAGCATCACTCAAACCAGGAGCTTCACTAGGA 45980
Query 48174 CACATCAATGACCAATCCTCATCATTT---TTTACTCTAGTCATAAATATATCTGGTATC 48230
| | || | |||||| | ||||| || ||||| |||| || | || || |||
Sbjct 45979 GAGAATAAAGTCCAATC---ACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATC 45923
Query 48231 CAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGT 48290
|| | |||| |||||||| |||| ||| | |||||| || || ||| || | |
Sbjct 45922 CATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTTTTTCTGATG 45863
Query 48291 TCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGT 48350
|| | || || | ||||||| ||||||||||||| || | || | |||| |||
Sbjct 45862 TCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGT 45803
Query 48351 CGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGG 48410
| ||| ||||| |||||||| | ||||||||||| ||||| ||||||| | ||| ||
Sbjct 45802 CTTTTGTTACCACCTTGATCAACGTATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGT 45743
Query 48411 ACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA 48470
| | |||||| || |||||||||| || | ||| ||| ||| | | ||| || ||
Sbjct 45742 ATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTG 45683
Query 48471 CTAAT-TGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACA-CCGTTTAAGGG 48528
||| || || ||| |||||||| || | ||||| ||| ||||||| | ||||| ||
Sbjct 45682 TGAATGTGTAA-ACCAATACCACCGGCAGTCTTAGAAATTTGAGCACATTCCTTTAA-GG 45625
Query 48529 TATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTT 48588
||||||| || || || ||| |||||| ||||| | || |||||| ||||||||
Sbjct 45624 TATCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTAAGAAACAAGAAGACATTT 45565
Query 48589 GCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTG 48648
| || ||| || | ||| |||| ||||||||| ||||| |||| || | | |
Sbjct 45564 GAGGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAG 45505
Query 48649 ATAACAATTTATATGTTTCAATAACAGAATCTAT-ATCCCATTGATGTATACCTATAGAT 48707
| | ||| || || ||||| || || || || | || | || ||||| | ||
Sbjct 45504 ACATCAAGTTGTAAGTTTCGATGACTTTTTCAATGTTTTCACCG-TGGATACCAACAGCA 45446
Query 48708 ACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATAT 48767
|| | ||| | || || ||| ||||||||||| || || ||| || ||||| | |||
Sbjct 45445 ACTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTTACCATTGATCTTCAATAAGTAT 45386
Query 48768 GATTTTTCCAATGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAA 48825
||| |||||||||| || ||||||||||||||||| ||||| || |||| ||||
Sbjct 45385 GATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAAA--TCTCTATCGAAGATAA 45328
Query 48826 TTGATGAATTTATTCTTTCCTTATGTTT-ATA----TACT----ACATC--CATTACATT 48874
| | | || || | || || ||||| ||| | | ||||| || | ||
Sbjct 45327 TAGTAGCATCTAAGGTATCTTTGTGTTTCATAACGGTTTTGTAAACATCATCA-GAAATC 45269
Query 48875 TTTTGATATAA--------TTGATTC---------CTTGTAAAGATCTTCTACAACATCA 48917
|| || | || || ||| ||||| | ||||| | ||| | |
Sbjct 45268 ATTGGAGACAAAACACCATTTCTTTCGTTAACGTAGTTGTATAAGTCTTCGATAACTTGA 45209
Query 48918 CTAAATAttttttttGTTTCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATA 48977
||||| |||||| |||| || || | ||| || | ||||| || || | | |
Sbjct 45208 GAAAATAATTTTTTGGTTTGCTTGTGTAAGTTACTGATGGCGATTCTGGCGGCAAGAACA 45149
Query 48978 GCATAATCTGGATGAATTGTTGTACATGTA-CTAGATATTTCTGCTGCTAATATATCTAA 49036
|||||||| ||||||| || || |||||| | | |||| || ||||| |||||||
Sbjct 45148 GCATAATCAGGATGAACAGTGGT-CATGTAGGCACAAGTTTCAGCGGCTAAGTTATCTAA 45090
Query 49037 TTCTTTAGTAGTTACACCTGTATATATTCCTTGAATAACTTTCATT--GCTATATTTACT 49094
||| | ||||| |||||| || | || |||| ||| || | || || ||
Sbjct 45089 TTCGATGGTAGTAACACCTTCGTAGACACCGGAGATAA--TTCTTTGGGTGATTTTGACA 45032
Query 49095 GGATCTATATGATCCATATCCAGTCCATAACATAAtttttttATTCTAGATGTAATTTTA 49154
||||| ||||| | ||| | |||||| |||||| | ||||| ||||||||||||
Sbjct 45031 GGATCGATATGTTTAGCATCTAATCCATAGCATAATCTAGCAATTCTGGATGTAATTTTA 44972
Query 49155 TCAAACATTATATT--CTCTTTACGACCGTCACGTTTTATAACAAACATCTTTACTATAA 49212
|||| ||| | | |||| | ||||| | ||| | ||||||||| |||| || ||
Sbjct 44971 TCAA--ATTGAACTGGAACTTTTCTTCCGTCTCTTTTAACAACAAACATGTTTA-TA-AA 44916
Query 49213 AAATAT 49218
| ||||
Sbjct 44915 AGATAT 44910
Score = 123 bits (136), Expect = 3e-23
Identities = 480/746 (64%), Gaps = 25/746 (3%)
Strand=Plus/Minus
Query 47009 TTTTGTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCAT 47068
|| ||||| || || |||||||||||||| ||||| ||||| || ||||| |||||
Sbjct 47165 TTGTGTTCTCAAGTAGTACATACCAGTCTTCAAACCCTTGCTCCAACCGTAGAAGTGCAT 47106
Query 47069 ACTAGTTAATTTA-GAATAACTAGGTTC-TGAAATATGAATATTAAGAGATTGACTCTGA 47126
|||||| ||| || | || | || |||||||| || | || ||| |||
Sbjct 47105 GGAAGTTAACTTACCCATGGTTGGGGCCATG--ATATGAATGTTCATGGAATGAGATTGA 47048
Query 47127 TCAATAAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCAT 47186
||||| || || ||||||||| |||||||| | ||| | |||||| || |||||
Sbjct 47047 TCAATGAAAGCTTGTCTATCAGCAGCCATATCAATGATAGTCTTTTGTGATAATTCCCAA 46988
Query 47187 ACTGTTTTATAAATTTGTTTAATGTCTTCTGGGA-GATTAGTA--TTTTGAATAGATCCT 47243
|| |||||||| | | || || |||| || | | || ||| | ||| ||||| ||
Sbjct 46987 ACAGTTTTATACAAATCCTTCATTTCTTGAGGAATGTTTGGTAATTGTTGGATAGAACCA 46928
Query 47244 CCgttttctataatttt---gttttttaattcatttgaccaaagttttcgt-tcagttaa 47299
||| | || || || || | ||||| || || | | | ||| |||
Sbjct 46927 TTGTTAGCAATGATATTAGACTTCATGGCTTCAT----CCCAAATACCCATATCAACTAA 46872
Query 47300 tgtttttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGAT--AGTAC-TCTACGGCT 47356
|| || | | || || |||||||| |||| |||||| ||| | |||| |
Sbjct 46871 ATCCTTCAATAAGTATGGGTTGACAATTTGGTATTCACCAGATAAAGTTCTTCTAGAG-- 46814
Query 47357 ATATATATTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGA 47416
|| || ||| || ||||||| | | ||||||| | || |||||||| | ||| ||
Sbjct 46813 -TACATGTTAGAAGTGAATGGTTCAAAACATTCATTGTAACCTAAAATTTGGGAAGTAGA 46755
Query 47417 TGCTGTAGGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNN 47476
|| || ||||| | ||||| |||||| ||||||| || | || ||||
Sbjct 46754 AGCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAAACCGTGCTTGGCAATCTTAGC 46695
Query 47477 NNNNNNNNGTTTCCAATCCCA-AAGATCTGATGGAACAACATTCCAAAAATCATATTGAA 47535
|||||||||| ||| | | |||| |||| ||||| ||||| ||||| |
Sbjct 46694 CTTCAATTCAGTCCAATCCCATAAGGT-AGTTGGAGCAACGTTCCAGAAATCGTATTGTA 46636
Query 47536 GAATTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGA 47595
|| |||| | |||||||| | || | ||| | || | | || ||| |
Sbjct 46635 AAACACCTTGAGAAGCTGGAGAACCTTCGTAAGAAGCATAGGTTCCTTCAATTTCAGCTA 46576
Query 47596 GTTCACAACTTGCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGAT 47655
|||| |||||||| ||| | ||| || ||||| || |||| ||||| | ||
Sbjct 46575 ATTCAGTGGAAGCTTCCAAAGCAGCGTGATAAATGGTTTCGAAAATTTGAATGTTCA-AT 46517
Query 47656 TCCTT-GCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCT 47714
||||| |||| | || || || ||| || ||||| ||||| |||
Sbjct 46516 TCCTTGGCTTTTTCAGAATCGAATGGAACTCTTAACATCATAAAAGTATCAGCCAAACCT 46457
Query 47715 TGAACACCAATACCAATTGGTCTATG 47740
|||||||| | |||| ||||| ||
Sbjct 46456 TGAACACCTACGGCAATAGGTCTGTG 46431
>seq13
Length=415809
Score = 358 bits (396), Expect = 7e-94
Identities = 631/908 (69%), Gaps = 16/908 (2%)
Strand=Plus/Plus
Query 18670 TTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACAT 18729
|||||||| || | |||||| |||||||||||||| || || || |||| ||||| |
Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093
Query 18730 TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAGT 18789
|||||||| || ||||| || | ||||| | | |||| | ||||| | | || |
Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAAT 173153
Query 18790 AGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTCATTCCTATTAAT 18849
| |||||| || ||||||| || |||| |||||| | |||| |||||| || | ||||
Sbjct 173154 AATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAAT 173213
Query 18850 TTAACAGGTAGTGCATCTGTAAGAAAT-TCTTGTTCTATATTTACTGCCTCTGATATAAT 18908
||| || | ||||| || || |||| ||| || | || || || | |||||
Sbjct 173214 GCAACTGGAATGGCATCAACAAAGTATCTCTT-TTCAATTTCAACAGCTTCAGCAATAAT 173272
Query 18909 AGATACAACTCTATCTTCATTAGGAGGGTA-TAGAAGATGTTTAAACATCAAACATGCAA 18967
| ||| | | | || || || | ||| || |||| | ||| ||||
Sbjct 173273 TCTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAG-TGGGAGAACAATAGACAGGCAA 173331
Query 18968 AATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCA 19027
| ||| ||||| || || ||||||| |||||||| || || || || ||||||||||
Sbjct 173332 AGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCA 173391
Query 19028 TCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTT 19087
||| || |||| || |||||||| |||| ||||||||| ||||| || || | |||||
Sbjct 173392 TCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTT 173451
Query 19088 CTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATT 19147
| || || ||||||||||| |||||||| || | ||| || |||| |||||||||
Sbjct 173452 CAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCATC 173511
Query 19148 TCAGTGCCCAATCAGCCTT---CTTTTTTACACATGGCATTGTCTCTATAGAATTAAATA 19204
| | ||||| |||||||| ||| || || || || || ||||||| || ||||
Sbjct 173512 TAATAGCCCATTCAGCCTTTTCCTTAATTTCA---GGAATAGTTTCTATAGCGTTTAATA 173568
Query 19205 GATACAT-ACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCT 19263
| | || | || | || ||| || | |||| |||| |||||| || ||||
Sbjct 173569 -AGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCA 173627
Query 19264 GAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGT 19323
|| ||||| ||||| || || || || ||||| ||||| | ||||||| || ||
Sbjct 173628 GAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGA 173687
Query 19324 ACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAA 19383
|||||| | | || |||| ||||| |||||||| || || |||||| ||| |||||
Sbjct 173688 ACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAG 173747
Query 19384 AATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAATCA 19440
|| || || || | ||| ||| | |||||| | | | | ||||||||||
Sbjct 173748 AAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCG 173807
Query 19441 TTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTA 19500
| | ||| ||||| ||||| | ||||||| | ||||| |||||||| || ||| | |||
Sbjct 173808 TGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTTA 173867
Query 19501 TACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCT 19560
|| | ||| || || | ||| || || |||| ||| ||||| |||| ||||||
Sbjct 173868 TAGGCTTCCCAAATTTCTGGGAATTTAATTGGGAATAAAACGAATCTTCTTTTGTTTTCT 173927
Query 19561 -TTAAGAA 19567
|||| ||
Sbjct 173928 GTTAATAA 173935
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 562108511919240
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