Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq4 208 4e-49 >seq4 Length=144043 Score = 208 bits (230), Expect = 4e-49 Identities = 438/649 (67%), Gaps = 7/649 (1%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||| |||||||| ||||||| ||||| || ||| ||| ||| || || || |||||| Sbjct 45982 GGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATC 45923 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | || ||||||||||| ||||| |||||||| || |||||||| ||| | | Sbjct 45922 CATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTTTTTCTGATG 45863 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 || | ||||||||| ||||| |||||||||||||||| || | |||||| ||| | Sbjct 45862 TCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGT 45803 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 ||||| ||||||||||| |||||||| ||||| | ||||||||| | | ||| || Sbjct 45802 CTTTTGTTACCACCTTGATCAACGTATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGT 45743 Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191 | || ||| | ||| || || || | | ||| | || || || ||||| || | | Sbjct 45742 ATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTG 45683 Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTA 26251 ||| || | ||| || ||||| || || ||||| ||||| || | ||| Sbjct 45682 TGAATGTGTAAACCAATACCACCGGCAGTCTTAGAAATTTGAGCACATTCCTTTAAGGTA 45623 Query 26252 TCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGC 26311 || | || || | || |||| | ||||| | ||| ||||||||||| | ||| Sbjct 45622 TCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTAAGAAACAAGAAGACATTTGA 45563 Query 26312 GAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTC 26371 | | || || | ||| |||| ||| || | |||||| ||| | |||| || | | Sbjct 45562 GGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAGAC 45503 Query 26372 A--AAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAGCTG 26429 | ||| || |||||||| | |||| || || || | | | ||| ||| Sbjct 45502 ATCAAGTTG--TAAGTTTCGATGACTTTTTCAATGTTTTCACCGTGGATACCAACAGCAA 45445 Query 26430 TTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCTCTAATCAAAT 26489 ||| | || || ||| |||| ||||| | ||| | |||| ||| || | Sbjct 45444 CTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTTACCAT--TGATCTTCAAT-AAGT 45388 Query 26490 AAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCT 26538 | ||| |||| || || || || |||||||| | | ||||||||||| Sbjct 45387 ATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAAATCTCT 45339 Score = 100 bits (110), Expect = 1e-16 Identities = 307/468 (66%), Gaps = 10/468 (2%) Strand=Plus/Minus Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754 ||||| | || ||||| ||||| ||||| ||| |||||||||| || ||||| || Sbjct 47161 GTTCTCAAGTAGTACATACCAGTCTTCAAACCCTTGCTCCAACCGTAGAAGTGCATGGAA 47102 Query 24755 GTTAGTTTTGCAATGTTTGCTG--ATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAA 24812 |||| || | ||| ||| | || || || |||||| || |||| ||| || Sbjct 47101 GTTAACTTACCCATGGTTGGGGCCATGATATGAAT--GTTCATGGAATGAGATTGATCAA 47044 Query 24813 CAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTG 24872 ||| ||||||||| ||||| | |||||||| || || |||| || || | | Sbjct 47043 TGAAAGCTTGTCTATCAGCAGCCATATCAATGATAGTCTTTTGTGATAATTCCCAAACAG 46984 Query 24873 TTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTT 24932 |||| || || || || || ||||| ||| | | ||| | || ||||| | Sbjct 46983 TTTTATACAAATCCTTCATTTCTTGAGGAATGTTTGGTAATTGTTGGATAGAACCATTGT 46924 Query 24933 CTCTCAAT-AGATTCAATCTCATA--TTCGGTGTCCAAAGATTAATTTTTTCAAGATCTC 24989 | |||| | ||| | |||| ||| ||||| | || | | | ||| Sbjct 46923 -TAGCAATGATATTAGACTTCATGGCTTCATC--CCAAATACCCATATCAACTAAATCCT 46867 Query 24990 TAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGT 25049 | | |||| | || | || |||| ||||| ||| |||||| | | || Sbjct 46866 TCAATAAGTATGGGTTGACAATTTGGTATTCACCAGATAAAGTTCTTCTAGAGTACATGT 46807 Query 25050 TTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTG 25109 | |||||||||||||||||||||||||| | ||||| ||||| |||||||| || |||| Sbjct 46806 TAGAAGTGAATGGTTCAAAACATTCATTGTAACCTAAAATTTGGGAAGTAGAAGCAGTTG 46747 Query 25110 GCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCT 25157 |||| || | |||| || ||||| ||||| | || |||||| Sbjct 46746 GCATAGGAGCAACCAATAAGGAGTTTCTTAAACCGTGCTTGGCAATCT 46699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039873559075