Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq4 208 4e-49
>seq4
Length=144043
Score = 208 bits (230), Expect = 4e-49
Identities = 438/649 (67%), Gaps = 7/649 (1%)
Strand=Plus/Minus
Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951
||| |||||||| ||||||| ||||| || ||| ||| ||| || || || ||||||
Sbjct 45982 GGAGAGAATAAAGTCCAATCACCATTTGCCTTGACTCTCTTCATGAACAAGTCAGGAATC 45923
Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011
|| | || ||||||||||| ||||| |||||||| || |||||||| ||| | |
Sbjct 45922 CATAAAGCTGGGAATAAATCTCTAGCTCTGATTTCTTCCTTACCGTGATTTTTTCTGATG 45863
Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071
|| | ||||||||| ||||| |||||||||||||||| || | |||||| ||| |
Sbjct 45862 TCGATGAAATCAAAGATATCAGAGTGCCATGGTTCTAGGTACAGAGCAAAGGCACCAGGT 45803
Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131
||||| ||||||||||| |||||||| ||||| | ||||||||| | | ||| ||
Sbjct 45802 CTTTTGTTACCACCTTGATCAACGTATCTGGCAGTGTTGTTGAAAACTCTAACCATAGGT 45743
Query 26132 ACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCG 26191
| || ||| | ||| || || || | | ||| | || || || ||||| || | |
Sbjct 45742 ATCAAACCATTGGAAGTACCATTGGTACCAGCAATGTAAGAGCCAGTGGATCTGATGTTG 45683
Query 26192 TGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTA 26251
||| || | ||| || ||||| || || ||||| ||||| || | |||
Sbjct 45682 TGAATGTGTAAACCAATACCACCGGCAGTCTTAGAAATTTGAGCACATTCCTTTAAGGTA 45623
Query 26252 TCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGC 26311
|| | || || | || |||| | ||||| | ||| ||||||||||| | |||
Sbjct 45622 TCATAGATACCGTCAATAGAATCATCCTTCATAGAAATTAAGAAACAAGAAGACATTTGA 45563
Query 26312 GAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATATCCTTCACTC 26371
| | || || | ||| |||| ||| || | |||||| ||| | |||| || | |
Sbjct 45562 GGTCTTGGAGTACCAGCATTGAATAGTGTTGGAGAAGCATGGGTAAAGTATCTTTGAGAC 45503
Query 26372 A--AAGCTGTATAAGTTTCAAGAACTTCATCGATATTGTAATTACTAACTTCAATAGCTG 26429
| ||| || |||||||| | |||| || || || | | | ||| |||
Sbjct 45502 ATCAAGTTG--TAAGTTTCGATGACTTTTTCAATGTTTTCACCGTGGATACCAACAGCAA 45445
Query 26430 TTCTTAACCACATATATTGAGGTCGTTCAATTACATTATTTTCCGCATCTCTAATCAAAT 26489
||| | || || ||| |||| ||||| | ||| | |||| ||| || |
Sbjct 45444 CTCTCATAATCAAATGTTGTGGTCTTTCAACGATCTTACCAT--TGATCTTCAAT-AAGT 45388
Query 26490 AAGATTTTTCTAAAGTTTTCAATCCAAAATAATCATGATTGAAATCTCT 26538
| ||| |||| || || || || |||||||| | | |||||||||||
Sbjct 45387 ATGATCTTTCCAATGTCTTGAAACCAAAATAGTTGTAGTTGAAATCTCT 45339
Score = 100 bits (110), Expect = 1e-16
Identities = 307/468 (66%), Gaps = 10/468 (2%)
Strand=Plus/Minus
Query 24695 GTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGAT 24754
||||| | || ||||| ||||| ||||| ||| |||||||||| || ||||| ||
Sbjct 47161 GTTCTCAAGTAGTACATACCAGTCTTCAAACCCTTGCTCCAACCGTAGAAGTGCATGGAA 47102
Query 24755 GTTAGTTTTGCAATGTTTGCTG--ATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAA 24812
|||| || | ||| ||| | || || || |||||| || |||| ||| ||
Sbjct 47101 GTTAACTTACCCATGGTTGGGGCCATGATATGAAT--GTTCATGGAATGAGATTGATCAA 47044
Query 24813 CAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTG 24872
||| ||||||||| ||||| | |||||||| || || |||| || || | |
Sbjct 47043 TGAAAGCTTGTCTATCAGCAGCCATATCAATGATAGTCTTTTGTGATAATTCCCAAACAG 46984
Query 24873 TTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATTTT 24932
|||| || || || || || ||||| ||| | | ||| | || ||||| |
Sbjct 46983 TTTTATACAAATCCTTCATTTCTTGAGGAATGTTTGGTAATTGTTGGATAGAACCATTGT 46924
Query 24933 CTCTCAAT-AGATTCAATCTCATA--TTCGGTGTCCAAAGATTAATTTTTTCAAGATCTC 24989
| |||| | ||| | |||| ||| ||||| | || | | | |||
Sbjct 46923 -TAGCAATGATATTAGACTTCATGGCTTCATC--CCAAATACCCATATCAACTAAATCCT 46867
Query 24990 TAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGT 25049
| | |||| | || | || |||| ||||| ||| |||||| | | ||
Sbjct 46866 TCAATAAGTATGGGTTGACAATTTGGTATTCACCAGATAAAGTTCTTCTAGAGTACATGT 46807
Query 25050 TTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTG 25109
| |||||||||||||||||||||||||| | ||||| ||||| |||||||| || ||||
Sbjct 46806 TAGAAGTGAATGGTTCAAAACATTCATTGTAACCTAAAATTTGGGAAGTAGAAGCAGTTG 46747
Query 25110 GCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAATCT 25157
|||| || | |||| || ||||| ||||| | || ||||||
Sbjct 46746 GCATAGGAGCAACCAATAAGGAGTTTCTTAAACCGTGCTTGGCAATCT 46699
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253039873559075
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |