Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq13 221 2e-52
seq1 143 4e-29
seq18 96.9 5e-15
>seq13
Length=415809
Score = 221 bits (244), Expect = 2e-52
Identities = 550/824 (67%), Gaps = 24/824 (3%)
Strand=Plus/Plus
Query 17879 ACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCATAAAATCAAAT 17938
||| | || || |||||||| ||||| || | || ||||| | |||||| || |||
Sbjct 173049 ACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTTTCCATAAAGTCGAAT 173108
Query 17939 GGATTAGTGGTTTTATAATATTTTTCTTGTATTAATTCGTATAATAATCTATCTGCTACA 17998
|| || ||| || | ||||| | ||| | |||||||||||| || |||
Sbjct 173109 GGGTTGGTGACATTGAACAGCTTTTCGTTACCTAAGGCAACTAATAATCTATCAGCAACA 173168
Query 17999 AATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGTAGTCTGAAAGGTAGAGCA 18058
||||| |||||||| ||| | ||| ||||||||| |||| | | || | |||
Sbjct 173169 AATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAATGCAACTGGAATGGCA 173228
Query 18059 TCAATAATAAAT-TCTTTCTCTATCTCAACAGACTCTTTTATTATGTTT---ATTACCCT 18114
|||| || || ||||| || || ||||||| || || || || || | | |
Sbjct 173229 TCAACAAAGTATCTCTTT-TCAATTTCAACAGCTTCAGCAATAATTCTTTCAATGATCTT 173287
Query 18115 AGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAAACACGCAAAATCAGTGTG 18174
| | ||| ||| || ||| ||| | | |||| ||| ||||| ||||| ||
Sbjct 173288 TGGATCTGG---TTTGTTCTTTAAGTGGG---AGAACAATAGACAGGCAAAGTCAGTATG 173341
Query 18175 TAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATACCTCt 18234
||||||||||||||| | || |||||||| || || || || ||||| | ||| |
Sbjct 173342 TAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGGCATCAAACCCTT 173401
Query 18235 tttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAAC-GCACG 18293
||| || | ||| || || | || || || ||| || || | ||| ||||| ||| |
Sbjct 173402 TTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACCTTCAACAGCA-G 173460
Query 18294 CGAACGCTATTAATCTTTCAGCA---AAACTGTATTTATTGCTCAGTATCCATTTTTGTG 18350
| || || | | |||||||||| ||| || |||| || | |||||| | |
Sbjct 173461 CAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTAT--CT-TGAATCCATCTAATAG 173517
Query 18351 CCCATTC-TCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAAATCATCT 18409
||||||| |||| | || || ||| | |||||||| || || || |||
Sbjct 173518 CCCATTCAGCCTTTTCCTTAATTTCA-GGAATAGTTTCTATAGCGTTTAATAAGAAATCA 173576
Query 18410 TTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATG 18469
||||| || | ||| || || || ||||| | ||| |||||||| ||||||| || |||
Sbjct 173577 TTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTCAGAGTGAATG 173636
Query 18470 CTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTA 18529
||||||| || || |||| || || | |||| || ||| ||||| || |
Sbjct 173637 TTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTGAACTTCAGCA 173696
Query 18530 TAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAA 18589
| || |||| ||||| || ||||| || ||||| |||| || || || || |||||
Sbjct 173697 GAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAAGAAAGCCAAG 173756
Query 18590 ACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTTCCATTCATCTATATCT 18646
|| | ||||||| | ||||||| || || | || ||||| || | || |||
Sbjct 173757 ACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATCGTGTAAATCC 173816
Query 18647 TTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690
|| || | ||| | |||||| | ||||| ||||| | ||||||
Sbjct 173817 TTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGC 173860
>seq1
Length=1362551
Score = 143 bits (158), Expect = 4e-29
Identities = 171/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
||||||||||| || | ||||| | ||||| || || ||||| || || |||||| |
Sbjct 277605 AAAATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCT 277546
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|||||| ||| || || || |||||| ||||| |||||||| || || || ||
Sbjct 277545 TCTGATTCTATCGACAATGTTAAGGCTAAAATCCAAGACAAAGAAGGTATTCCACCTGAT 277486
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
||||||||||| || | || |||||||| | |||||| ||||||||||| || ||
Sbjct 277485 CAACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTAC 277426
Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051
|| || ||||| | || | || ||||| |||||||||||||| ||||
Sbjct 277425 AACATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATTAAGAGGTGGTG 277374
>seq18
Length=128875
Score = 96.9 bits (106), Expect = 5e-15
Identities = 154/221 (70%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 155832 TTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCTGATAATATT 155891
||| | || || || || || || || || || || ||||||||| | |||| | ||||
Sbjct 90817 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 90876
Query 155892 TTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTG 155951
|| || || || ||||| || ||||| || || || || |||||||||||
Sbjct 90877 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 90936
Query 155952 ATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAA 156011
|| | ||| ||||| || | ||||| ||||| ||||| ||||| || || |||
Sbjct 90937 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 90996
Query 156012 GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGT 156052
|| | || || || ||||| ||||||| ||||| |||||
Sbjct 90997 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGGTGT 91037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731871624915600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |