Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 187 5e-42
seq13 176 9e-39
seq18 156 8e-33
>seq1
Length=1362551
Score = 187 bits (206), Expect = 5e-42
Identities = 180/231 (78%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | ||| ||||| |||||||| | ||||| || || || |||||
Sbjct 277375 ACCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 277434
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| |||| |||| || ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 277435 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 277494
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| |||||||| ||||| |||||| || ||||| |||||||| || ||||| ||
Sbjct 277495 AATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGAC 277554
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
|| | ||||||||| |||||||||| ||||| | || || ||||||||
Sbjct 277555 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 277605
>seq13
Length=415809
Score = 176 bits (194), Expect = 9e-39
Identities = 470/723 (65%), Gaps = 6/723 (1%)
Strand=Plus/Plus
Query 49646 TAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAA 49705
|||||||||||| || ||||||||||||||||| ||||| ||| ||||||||| |
Sbjct 173150 TAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAG 173209
Query 49706 TAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaat 49765
|||| || ||| | |||||| ||| || ||||| ||||| ||||||| |||
Sbjct 173210 TAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAAT 173269
Query 49766 tatcataattatattattttttgataatttatatttaatatgattcgcatatattaaACA 49825
|| | || || || ||| ||| | | || || | | | | | || |||
Sbjct 173270 AATTCT--TTCAATGATCTTTGGATCTGGTTTGTTCTTTAAG-TGGGAGAACAATAGACA 173326
Query 49826 TGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 49885
||||| |||||||||||||| || || ||| | || ||||| || ||||| || ||
Sbjct 173327 GGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACC 173386
Query 49886 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 49945
||||| || || | || || | ||| || || | ||||| || ||| || || |
Sbjct 173387 AGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGAC 173446
Query 49946 ACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATAT 50005
||| || ||| ||||| || | | |||| | |||||| | | |||| ||
Sbjct 173447 ACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAAT 173506
Query 50006 CCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 50065
||| | |||||||| || || |||| || || ||| ||| |||||||||| || ||
Sbjct 173507 CCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAA 173566
Query 50066 TAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTC 50125
||| || ||||| | | |||||||||||| ||||
Sbjct 173567 TAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTC 173626
Query 50126 AGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTG 50185
||| || | |||||| ||||| || || || | ||||||| | ||
Sbjct 173627 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 173686
Query 50186 AACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAA 50245
|||||| | | |||| |||||| || || ||| |||||||||||||| || || ||
Sbjct 173687 AACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 173746
Query 50246 GAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTT---TTAAATTTTCCCAAGA 50302
||| || || || | ||| ||| | ||||||| || | || || | ||||
Sbjct 173747 GAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATC 173806
Query 50303 TTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTTTT 50362
| | ||| || || ||||| | |||||| ||||| || || ||| ||| | | ||
Sbjct 173807 GTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTT 173866
Query 50363 ATA 50365
|||
Sbjct 173867 ATA 173869
>seq18
Length=128875
Score = 156 bits (172), Expect = 8e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||| ||||||||| | | || ||||| |||| ||||| ||||| ||| |
Sbjct 91045 GTTCAATAACACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGT 90986
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
| ||||||||||| |||| | || || |||||||||||||||||||||||||| ||||
Sbjct 90985 TGTAATCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTT 90926
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
|||||||||| || ||||| || ||||| || || || ||| |||| || |
Sbjct 90925 GATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAG 90866
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527
||||| ||||| | ||| ||||| ||||| ||||| || || | |||
Sbjct 90865 CAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 90817
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984479482840350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |