Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1 187 5e-42 seq13 176 9e-39 seq18 156 8e-33 >seq1 Length=1362551 Score = 187 bits (206), Expect = 5e-42 Identities = 180/231 (78%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368 ||||||||| | | ||| ||||| |||||||| | ||||| || || || ||||| Sbjct 277375 ACCACCTCTTAATCTTAAGACTAAGTGTAAAGTGGATTCTTTTTGAATGTTGTAGTCAGA 277434 Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428 ||| |||| |||| || ||||| |||||||| ||||||||||| |||||||||||||| Sbjct 277435 TAAAGTTCTACCATCTTCTAATTGCTTACCAGCGAAGATTAATCTTTGTTGATCAGGTGG 277494 Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488 || |||||||| ||||| |||||| || ||||| |||||||| || ||||| || Sbjct 277495 AATACCTTCTTTGTCTTGGATTTTAGCCTTAACATTGTCGATAGAATCAGAAGATTCGAC 277554 Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 || | ||||||||| |||||||||| ||||| | || || |||||||| Sbjct 277555 CTCCAAAGTAATGGTCTTACCAGTTAGAGTTTTTACGAAAATTTGCATTTT 277605 >seq13 Length=415809 Score = 176 bits (194), Expect = 9e-39 Identities = 470/723 (65%), Gaps = 6/723 (1%) Strand=Plus/Plus Query 49646 TAATAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAA 49705 |||||||||||| || ||||||||||||||||| ||||| ||| ||||||||| | Sbjct 173150 TAATAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAG 173209 Query 49706 TAATTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaat 49765 |||| || ||| | |||||| ||| || ||||| ||||| ||||||| ||| Sbjct 173210 TAATGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAAT 173269 Query 49766 tatcataattatattattttttgataatttatatttaatatgattcgcatatattaaACA 49825 || | || || || ||| ||| | | || || | | | | | || ||| Sbjct 173270 AATTCT--TTCAATGATCTTTGGATCTGGTTTGTTCTTTAAG-TGGGAGAACAATAGACA 173326 Query 49826 TGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCC 49885 ||||| |||||||||||||| || || ||| | || ||||| || ||||| || || Sbjct 173327 GGCAAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACC 173386 Query 49886 TGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATAT 49945 ||||| || || | || || | ||| || || | ||||| || ||| || || | Sbjct 173387 AGGCATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGAC 173446 Query 49946 ACCCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATAT 50005 ||| || ||| ||||| || | | |||| | |||||| | | |||| || Sbjct 173447 ACCTTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAAT 173506 Query 50006 CCAATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAA 50065 ||| | |||||||| || || |||| || || ||| ||| |||||||||| || || Sbjct 173507 CCATCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAA 173566 Query 50066 TAATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTC 50125 ||| || ||||| | | |||||||||||| |||| Sbjct 173567 TAAGAAATCATTTTCCTTTGGATCCTTGATGTATGTGTCTAATAATAAAGAATAAGTTTC 173626 Query 50126 AGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACTG 50185 ||| || | |||||| ||||| || || || | ||||||| | || Sbjct 173627 AGAGTGAATGTTTTCCATCATAATTTGGAAACCGTAGAAACACTTAGCTTCTGGAATTTG 173686 Query 50186 AACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAA 50245 |||||| | | |||| |||||| || || ||| |||||||||||||| || || || Sbjct 173687 AACTTCAGCAGAGAAATTTTCAACCAAGTTTTCATTGACAATACCATCAGAAGCAGCAAA 173746 Query 50246 GAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTT---TTAAATTTTCCCAAGA 50302 ||| || || || | ||| ||| | ||||||| || | || || | |||| Sbjct 173747 GAAAGCCAAGACTCTTGAAATGAAAAATCTTTCATTTTCATTCATTCTGTTATTCCAATC 173806 Query 50303 TTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTTTT 50362 | | ||| || || ||||| | |||||| ||||| || || ||| ||| | | || Sbjct 173807 GTGTAAATCCTTAGACAAATCGATTTCTTCAGCGGTCCAGAAAGAAGCTTCGGCTCTCTT 173866 Query 50363 ATA 50365 ||| Sbjct 173867 ATA 173869 >seq18 Length=128875 Score = 156 bits (172), Expect = 8e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||||| ||||||||| | | || ||||| |||| ||||| ||||| ||| | Sbjct 91045 GTTCAATAACACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGT 90986 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | ||||||||||| |||| | || || |||||||||||||||||||||||||| |||| Sbjct 90985 TGTAATCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTT 90926 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 |||||||||| || ||||| || ||||| || || || ||| |||| || | Sbjct 90925 GATCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAG 90866 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAA 192527 ||||| ||||| | ||| ||||| ||||| ||||| || || | ||| Sbjct 90865 CAGATTCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 90817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479482840350