Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq13 167 4e-36
seq18 141 2e-28
>seq13
Length=415809
Score = 167 bits (184), Expect = 4e-36
Identities = 364/540 (67%), Gaps = 5/540 (1%)
Strand=Plus/Plus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||| || ||||||||| | ||||| || || || || || || |||| |||||
Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093
Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATC-AATACATATAA 38950
| |||||| || ||||| || || ||| | ||||| || | || || |||
Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGT-TACCTAAGGCAACTAA 173152
Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010
||||||||| || ||||||||||||||||| ||||| ||| ||||||||| | |||
Sbjct 173153 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAA 173212
Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070
| || ||| | |||||| ||| || ||||| ||||| ||||||| ||| ||
Sbjct 173213 TGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAATAAT 173272
Query 39071 cataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATGC 39130
| || || || ||| ||| | | || || | | | | | || ||| ||
Sbjct 173273 --TCTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAG-TGGGAGAACAATAGACAGGC 173329
Query 39131 AAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGG 39190
||| || |||||||||||||| || ||| | || ||||| || ||||| || || ||
Sbjct 173330 AAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGG 173389
Query 39191 CATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACC 39250
||| || || | || || | ||| || || | ||||| || ||| || || | |||
Sbjct 173390 CATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACC 173449
Query 39251 CTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCCA 39310
|| ||| ||||| || | | |||| | |||||| | | |||| ||||||
Sbjct 173450 TTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCA 173509
Query 39311 ATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 39370
| || ||||| || || |||| || || ||| ||| |||||||||| || |||||
Sbjct 173510 TCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAA 173569
>seq18
Length=128875
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|||| ||||||||| | || || ||||| |||| ||||| ||||| || || |||
Sbjct 91040 ATAACACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAA 90981
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| ||||| | || |||| || ||||||||||||||||| |||||||| ||||| |||
Sbjct 90980 TCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCA 90921
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| || ||||| || || || ||| ||||| || | |||
Sbjct 90920 GGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGAT 90861
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054
|| ||||| | ||| ||||| ||||| ||||| || ||
Sbjct 90860 TCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTT 90823
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135536117800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |