Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21] 41 sequences; 8,099,637 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq13 167 4e-36 seq18 141 2e-28 >seq13 Length=415809 Score = 167 bits (184), Expect = 4e-36 Identities = 364/540 (67%), Gaps = 5/540 (1%) Strand=Plus/Plus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 ||||| || ||||||||| | ||||| || || || || || || |||| ||||| Sbjct 173034 TTTTGATAATCAGAAACTCTCTTTTCAAAGAAATTGGTCTTACCAGCTAAGGATATGTTT 173093 Query 38892 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATC-AATACATATAA 38950 | |||||| || ||||| || || ||| | ||||| || | || || ||| Sbjct 173094 TCCATAAAGTCGAATGGGTTGGTGACATTGAACAGCTTTTCGT-TACCTAAGGCAACTAA 173152 Query 38951 TAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAA 39010 ||||||||| || ||||||||||||||||| ||||| ||| ||||||||| | ||| Sbjct 173153 TAATCTATCAGCAACAAATTCAACATATTGGTTCATTAGATCAGCATTCATACCAAGTAA 173212 Query 39011 TTTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattat 39070 | || ||| | |||||| ||| || ||||| ||||| ||||||| ||| || Sbjct 173213 TGCAACTGGAATGGCATCAACAAAGTATCTCTTTTCAATTTCAACAGCTTCAGCAATAAT 173272 Query 39071 cataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATGC 39130 | || || || ||| ||| | | || || | | | | | || ||| || Sbjct 173273 --TCTTTCAATGATCTTTGGATCTGGTTTGTTCTTTAAG-TGGGAGAACAATAGACAGGC 173329 Query 39131 AAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGG 39190 ||| || |||||||||||||| || ||| | || ||||| || ||||| || || || Sbjct 173330 AAAGTCAGTATGTAAACCTTCATCTCTACAGATCAATTCGTTGGAGAAAGTCAAACCAGG 173389 Query 39191 CATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACC 39250 ||| || || | || || | ||| || || | ||||| || ||| || || | ||| Sbjct 173390 CATCAAACCCTTTTTCTTCAACCAGAAGATAGCAGCAAATGAACCAGAGAAAAAGACACC 173449 Query 39251 CTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATCCA 39310 || ||| ||||| || | | |||| | |||||| | | |||| |||||| Sbjct 173450 TTCAACAGCAGCAAAAGCAACCAGTCTTTCAGCAAACAAAGCGTCCTTATCTTGAATCCA 173509 Query 39311 ATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 39370 | || ||||| || || |||| || || ||| ||| |||||||||| || ||||| Sbjct 173510 TCTAATAGCCCATTCAGCCTTTTCCTTAATTTCAGGAATAGTTTCTATAGCGTTTAATAA 173569 >seq18 Length=128875 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 |||| ||||||||| | || || ||||| |||| ||||| ||||| || || ||| Sbjct 91040 ATAACACCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAA 90981 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || ||||| | || |||| || ||||||||||||||||| |||||||| ||||| ||| Sbjct 90980 TCAGATAAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCA 90921 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| || ||||| || || || ||| ||||| || | ||| Sbjct 90920 GGTGGAATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGAT 90861 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT 172054 || ||||| | ||| ||||| ||||| ||||| || || Sbjct 90860 TCGACTTCCAAAGTGATGGTCTTACCGGTTAAGGTCTT 90823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905135536117800