Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq18 109 5e-19
seq1 104 2e-17
>seq18
Length=128875
Score = 109 bits (120), Expect = 5e-19
Identities = 155/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 24713 TTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTA 24772
||| | || || |||||||||| || || || | ||||| ||| | | || || |
Sbjct 90817 TTTGTCAAGACCTTAACCGGTAAGACCATCACTTTGGAAGTCGAATCTGCTGAAACTATT 90876
Query 24773 GAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTG 24832
|| | || || |||||||||||||| ||||| || || || ||||||||| | ||
Sbjct 90877 GACGCTGTCAAGGCCAAGATCCAAGACAAGGAAGGTATTCCACCTGATCAACAAAGATTA 90936
Query 24833 ATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAG 24892
|||||||| || ||||| | || || |||| | | || ||||| ||||| |||||
Sbjct 90937 ATCTTTGCTGGTAAACAATTAGAAGACGGTAGAACCTTATCTGATTACAACATCCAAAAA 90996
Query 24893 GAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||||| || |||||||| || | ||||| | || ||
Sbjct 90997 GAATCTACTCTACACTTAGTTCTAAGATTGAGAGGTGG 91034
>seq1
Length=1362551
Score = 104 bits (114), Expect = 2e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| || || | ||||| ||||| ||||| || ||||| | || || ||| | |
Sbjct 277602 ATGCAAATTTTCGTAAAAACTCTAACTGGTAAGACCATTACTTTGGAGGTCGAATCTTCT 277543
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| | | || || | ||| | ||| ||||||||||||||||| || || || |||||
Sbjct 277542 GATTCTATCGACAATGTTAAGGCTAAA-ATCCAAGACAAAGAAGGTATTCCACCTGATCA 277484
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | || ||||| || || || || | || ||| |||| | || || || ||
Sbjct 277483 ACAAAGATTAATCTTCGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTACAA 277424
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATT 24921
||||||||| ||||| || ||||||| || || ||||
Sbjct 277423 CATTCAAAAAGAATCCACTTTACACTTAGTCTTAAGATT 277385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897369427480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |