Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F000775265.3_202016-04-21]
41 sequences; 8,099,637 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq18 127 2e-24
seq1 122 7e-23
>seq18
Length=128875
Score = 127 bits (140), Expect = 2e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
|| || ||||| | || || || || || || ||||||||||| ||||| ||||| |
Sbjct 91034 CCACCTCTCAATCTTAGAACTAAGTGTAGAGTAGATTCTTTTTGGATGTTGTAATCAGAT 90975
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||| | | || || | |||||| |||||| | || |||||||| ||||| || |||
Sbjct 90974 AAGGTTCTACCGTCTTCTAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 90915
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
||||| || |||||||| | || ||||||| || | ||| |||| | ||| |||
Sbjct 90914 ATACCTTCCTTGTCTTGGATCTTGGCCTTGACAGCGTCAATAGTTTCAGCAGATTCGACT 90855
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777
|| | ||| || || || || |||||||| || |||||
Sbjct 90854 TCCAAAGTGATGGTCTTACCGGTTAAGGTCTTGACAAA 90817
>seq1
Length=1362551
Score = 122 bits (134), Expect = 7e-23
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 29590 GTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCA 29649
|||||||||||||||||||| || || | | || | | ||| || | ||| || |||
Sbjct 277406 GTGGATTCTTTTTGAATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 277465
Query 29650 GCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTG 29709
|| | || |||||||| ||||| || |||||||| ||||||||||| | ||| ||
Sbjct 277466 GCGAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCTTTGTCTTGGATTTTAGCCTTA 277525
Query 29710 ACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTT 29769
||| | || | || |||||| ||| || || | ||| || || || ||||||| |||
Sbjct 277526 ACATTGTCGATAGAATCAGAAGATTCGACCTCCAAAGTAATGGTCTTACCAGTTAGAGTT 277585
Query 29770 TTAACAAATATCTGCATTTT 29789
|| || || || ||||||||
Sbjct 277586 TTTACGAAAATTTGCATTTT 277605
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385219007510781
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |